Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral3301g00047 | ATGAATCTAGATGAACAAGACGCTCCAGCTTCTTTAGCAGCATGTCCAAGGACTAAGCTTCCGGCGAGTGACGATACTTTTGCGGCTGGAAGCCCGTTTGAATCCCTGGATTCTGCATATTCCATTCAAGCTCGACTTTCTAATGACTGTTCTCGATGTGTTTCTGATCGAGGCTTCTGCAGACTCGACGCCAAAGCACAGTTTTATTGTTCCAAATCCAAAGTTGCAGAAAATCCACCGCCGGTGGGAGAAAATTCACGGTCTGGCAAGATGAGACTTATAATAGGTTTAACAAGTGGAGCAATTGGGACAGTGCTAATATGTATGATTATTTTTTGTTGTATAATCAAATCACTGAGGCAGAAAATAGAGTTCTTGAAGACATCTAGGGCTGACCAAAATATCGAGGCCTTCATTAGAAACCACGGACCTCTAGCTCTCACAAGATATAAATATGCGGAGGTGAAAAAAATGACCAAATCTTTCCAAGTTAAACTGGGACAAGGTGGTTATGGCGCTGTATACAAAGGAGAACTACTCAATGGTTGCCCTGTTGCCATCAAGTTACTGAAGTCATCCAAAGGGAATGGGGAAGAATTTATCAATGAGGTTGCTAGCATTAGTAAAACTTCTCATGTAAATGTTGTTACCCTCCTAGGGTTCTGCTTGGAAGGTCGAAAAAAGGCTCTTATATATGAGTTTATGCCAAATGGATCTCTTGATAAATTCATTCGTAATACTGCAGATAGAACTAGTCCATCCTTAACTTGGGAGTATTTGTACGAAATTGCAATTGGGACAGCTCGAGGACTTGAATACTTGTACAAGGGATGCAACACTCGAATTCTACATTTTGATATAAAGCCACATAACATCCTTTTGGATGAAAGCTTTTGTCCCAAGATCTCAGATTTTGGGCTTGCAAAGTTGTGTCCAAGGAAAGAAAGCATAGTTTCAATTTCAGAAGCTCGAGGAACTATAGGATATCTTGCTCCAGAAGTTTGGAATAGAAATATAGGAAGAGTTTCGCATAAGTCTGACATTTTTAGTTATGGAATGCTGTTGTTAGATATGGTTGGTGAGAGAAAGAATTTGAATCCTGAAGACTGTACAACCGAGACTTATTTTCCAGATTGGATTTATGATAAACTTGAGAAAGGAAGCAAGTTGGGACAGGATGATGGGGCGAACCCCATGGAGGAAAATGACATTGCAAAGAAATTGACCATTGTGGGTTTATGGTGTATTCAAACATTTCCGACTCAAAGACCAACAATTAGTAGAGTTATTGAAATGTTAGAGGGAAGTTTAGACTCTCTGGAAATGCCACCGAAGCCAGTCATGCTCTCCCCTCCAAGATTAGAACTAGAATCTTCTGCAACTTGCAATACCAAGTCAGAACAAGTTGATTCTGCAGAAAGCTCTTCCCAAAGGTTGGAGACCCACTAG | 1449 | 0.4058 | MNLDEQDAPASLAACPRTKLPASDDTFAAGSPFESLDSAYSIQARLSNDCSRCVSDRGFCRLDAKAQFYCSKSKVAENPPPVGENSRSGKMRLIIGLTSGAIGTVLICMIIFCCIIKSLRQKIEFLKTSRADQNIEAFIRNHGPLALTRYKYAEVKKMTKSFQVKLGQGGYGAVYKGELLNGCPVAIKLLKSSKGNGEEFINEVASISKTSHVNVVTLLGFCLEGRKKALIYEFMPNGSLDKFIRNTADRTSPSLTWEYLYEIAIGTARGLEYLYKGCNTRILHFDIKPHNILLDESFCPKISDFGLAKLCPRKESIVSISEARGTIGYLAPEVWNRNIGRVSHKSDIFSYGMLLLDMVGERKNLNPEDCTTETYFPDWIYDKLEKGSKLGQDDGANPMEENDIAKKLTIVGLWCIQTFPTQRPTISRVIEMLEGSLDSLEMPPKPVMLSPPRLELESSATCNTKSEQVDSAESSSQRLETH | 482 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral3301g00047 | 482 | SMART | serkin_6 | 160 | 433 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral3301g00047 | 482 | Gene3D | Transferase(Phosphotransferase) domain 1 | 235 | 442 | - | - | |
Pral3301g00047 | 482 | FunFam | serine/threonine-protein kinase PBS1-like | 128 | 234 | - | - | |
Pral3301g00047 | 482 | Gene3D | Phosphorylase Kinase; domain 1 | 136 | 234 | - | - | |
Pral3301g00047 | 482 | FunFam | PR5-like receptor kinase | 235 | 445 | - | - | |
Pral3301g00047 | 482 | MobiDBLite | consensus disorder prediction | 440 | 482 | - | - | |
Pral3301g00047 | 482 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 282 | 294 | IPR008271 | GO:0004672|GO:0006468 | |
Pral3301g00047 | 482 | ProSitePatterns | Protein kinases ATP-binding region signature. | 166 | 188 | IPR017441 | GO:0005524 | |
Pral3301g00047 | 482 | Pfam | Protein tyrosine and serine/threonine kinase | 162 | 433 | IPR001245 | GO:0004672|GO:0006468 | |
Pral3301g00047 | 482 | SUPERFAMILY | Protein kinase-like (PK-like) | 143 | 434 | IPR011009 | - | |
Pral3301g00047 | 482 | ProSiteProfiles | Protein kinase domain profile. | 160 | 437 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pral3301g00047 | 482 | MobiDBLite | consensus disorder prediction | 456 | 476 | - | - | |
Pral3301g00047 | 482 | Coils | Coil | 116 | 136 | - | - | |
Pral3301g00047 | 482 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 130 | 459 | IPR045874 | GO:0004672 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral3301g00047 | Pral-Chr3301 | 389569 | 392254 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral3301g00047 | 17 | 461 | Receptor kinase-like Gene Family | AT1G66910 | 47.903 | 1.33e-140 | 417 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Pral3301g00047 | PK_Tyr_Ser-Thr | 9.9e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral3301g00047 | - | - | pcin:129304394 | 673.315 |