Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3301g00045 ATGTCATTCCAACAACAAGAGGAACACTTCCTGATGCTGAAACTCATCCGATGCTTTTTTCTTCCTCTGTTTTCCTTCTTCATCCATAATGCCTCTGCTAGTAATTCCACTTCGTCTTCCACAGTCTGTCGCCCCTACAGCTGTGCCGACGGTTTGCAAATCAGATACCCTTTCTGGCTATCACATGGTTCCCCTCCTGACCAGTACTGTGGTTATCAGGAATTTGGGCTCATCTGCTCCGATGGTGGCTACCCCATCTTCTCTCTGCCGCCTGGGTTATATTATCGTGTCGCGGGCATAGACTATGATAATCATATCATTCACCTTATTGACCTTGACACTTACAACCGAACATGTCCAAGGGCACTTCACAACGTTCCCCTGGGAAATTTGCCCCTTTCGCATTCCCCTTTGAATTTGAACCTTGGCTTTCACTACAATTGCAGTTCTTACCCATATAATGCTTCGCCCATAAGATGTTTGACGTCTGGTGCGAAGCAGTCCTTTGTGTTTGTGATGGGGAACGAGAGTACTAGGGATTTTGATTGGTCCAAGACTTGTGAACAGAGTGTTGTGGTGACGGTGATGAAGGATCATGTTACAAGTGAAGGGTTGATGAATGAGTATAAAGAGGCCATGAATGAAGGGTTTTTTCTTAATTGGCAAACTGCCAAGAGTTGTGAAGAGTGTGAAGCTTCTGATGGGATTTGCGGCTACAGTAATACCAGAAAGCAGTCCCTGTGCTTCTGCAAGGATGGCAGCGTACAAAGCAATAGCTGCTCAGGAAGACGCAAAGGCCATTTGTCAAAGCTAACTATTGGTTTAATAGCTGCAGGAGCGGGGGCTCTGCTGATATGCATCATTATCTTCTTCTTGCGACGAAAAATATCATTAATTATCTCAGTAAATTCTTGGAAGGTGAAAAAGAACGATGAAGCCATTGAGGCCTTCATCAGAAATAATGGGCCTCTAACTATAACAAGATACACATTTTCAGAAGTCAAGAAAATGACCAACTCTTTTGAAGTCAAATTGGGAGAAGGAGGTTATGGCACTGTATTCAAAGGAAGCGCACTAGACAGCTGTCCTGTGGCTGTGAAGGTGTTGAATGCATCCAAAGGGAACGGTGAAGAATTTATCAATGAGGTCGTGAGCATTAGTAGGACTTCACATGTAAATATCGTCACCCTCCTTGGTTTTTGTGTTGAAGGCAGCAAAAAAGCACTTGTATACGAACTTATGCCCAATGGTTCACTTGAGAAGTTCATATGCAAGAGGGATTTAGAGCCAAATGATCCACCCTTGAGCTGGGAAAAATTACTCCAAATTGCAGAAGGGATAGCCAAAGGACTCGAGTATTTGCATAGAGGTTGCAGCACTCGAATCTTGCATTTTGACATAAAGCCTAACAATATCCTTTTGGATAAAAACTTGTGTCCAAAGATCTCAGATTTTGGACTGGCTAAACTCTGCTCTAAAACACGTAGTATTGTCTCAATGCTTGATGCAAGAGGAACTGTTGGGTACATTGCACCAGAAGTATGGAATAGAAACTTTGGAGGAGTCTCTCATAAGTCAGACGTGTATAGTTATGGAATGTTGATTTTGGAAATGGTTGGAGGAAGACAAAATATCAACAGAGACATGAATGATTCAAGTGATATATATTTTCCTCATTTGTTATACAATCAAATTGAGATAGACAAGAATATAACAGAACATGATGGTATGACCAGAGAGGAAAGTGAAATTGCGAAGAAGATGATCATGGTGGGATTATGGTGCGTACAGACAATGCCATCAGATAGGCCCCCTATGAATAGGGTGATTGAGATGTTGGAAGGGAGCTTGGATCAGCTTCCGGTACCACCAAAGCCTTTCATGTTTCCACCTATTATTCCAACAACCAGCCGAGAGGAAAGTTGTGCTACAAATGGTGTTCTTTCCTTTTCGGTTGATTATCAATGTGGTAGATAG 1977 0.4249 MSFQQQEEHFLMLKLIRCFFLPLFSFFIHNASASNSTSSSTVCRPYSCADGLQIRYPFWLSHGSPPDQYCGYQEFGLICSDGGYPIFSLPPGLYYRVAGIDYDNHIIHLIDLDTYNRTCPRALHNVPLGNLPLSHSPLNLNLGFHYNCSSYPYNASPIRCLTSGAKQSFVFVMGNESTRDFDWSKTCEQSVVVTVMKDHVTSEGLMNEYKEAMNEGFFLNWQTAKSCEECEASDGICGYSNTRKQSLCFCKDGSVQSNSCSGRRKGHLSKLTIGLIAAGAGALLICIIIFFLRRKISLIISVNSWKVKKNDEAIEAFIRNNGPLTITRYTFSEVKKMTNSFEVKLGEGGYGTVFKGSALDSCPVAVKVLNASKGNGEEFINEVVSISRTSHVNIVTLLGFCVEGSKKALVYELMPNGSLEKFICKRDLEPNDPPLSWEKLLQIAEGIAKGLEYLHRGCSTRILHFDIKPNNILLDKNLCPKISDFGLAKLCSKTRSIVSMLDARGTVGYIAPEVWNRNFGGVSHKSDVYSYGMLILEMVGGRQNINRDMNDSSDIYFPHLLYNQIEIDKNITEHDGMTREESEIAKKMIMVGLWCVQTMPSDRPPMNRVIEMLEGSLDQLPVPPKPFMFPPIIPTTSREESCATNGVLSFSVDYQCGR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3301g00045 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Pral3301g00045 658 ProSiteProfiles Protein kinase domain profile. 339 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3301g00045 658 Pfam Wall-associated receptor kinase galacturonan-binding 43 111 IPR025287 GO:0030247
Pral3301g00045 658 Pfam Wall-associated receptor kinase C-terminal 163 253 IPR032872 -
Pral3301g00045 658 Gene3D Phosphorylase Kinase; domain 1 315 413 - -
Pral3301g00045 658 SMART serkin_6 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3301g00045 658 SUPERFAMILY Protein kinase-like (PK-like) 327 641 IPR011009 -
Pral3301g00045 658 Pfam Protein tyrosine and serine/threonine kinase 342 613 IPR001245 GO:0004672|GO:0006468
Pral3301g00045 658 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Pral3301g00045 658 PANTHER RUST RESISTANCE KINASE LR10-RELATED 310 635 IPR045874 GO:0004672
Pral3301g00045 658 Gene3D Transferase(Phosphotransferase) domain 1 414 620 - -
Pral3301g00045 658 FunFam PR5-like receptor kinase 414 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3301g00045 Pral-Chr3301 363450 366154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3301g00045 43 626 Receptor kinase-like Gene Family AT5G38260 41.322 2.54e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3301g00045 PK_Tyr_Ser-Thr 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3301g00045 - - gmx:100781977 772.696