Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3301g00044 ATGGCAGCGAACAAAGCAATGGCTGCTCAAGAGGGATATTTAGACCCAAATGATCCATCCTTAAGTTGGGAAAGATTACTCCAAATTGCAAAAAGGATAGCTAAAGGACTCGAGTATTTGCATAGTGGTTGCAACCCTCAGACACTGCATTTTGACATTAAACCTAACAATATCTTTTTGGATAAAAGCTTTTATCCAAAGATCTCAGATTCTGGACAAGCTAAACTTTGTTCTAGAACACATAGTACCGTCTCAGTGCCTGGTGCAAGAGGCACTGCTGGGTATATTGCTCTAAAAATATGGAATAGGAACTTTGGAGGAGCCTCCCACAAGTCAGAGGTGTTTAGCTATGGAATGTTGATTTTAAAAATGGCTGGAGGAAGGCAAGATATCAATGGAGAAGGGAGTGATTCAAGTGATAAATATTTTCCTCATTTTGTATACAAGCAAATTGCAGTAGACAAGAATATTACAGAACATGATGACATGATGTTGGGATTATGGTGCGTACGGACAATGCCATCAGATAGACCTGTCATGAGTAGAGTGATTGAGGTGTTAAAAGGAAGCTTGGAACAGCTCTCAATTCTACCAAAGCCTTCCATATTTTCTCCTACACCTCAGCTTGCTGATCTCTGTAAATATAGTGATGAATTATGTGGCAGTCCTTTCTCCCAGTTTTGCGTCTCTGTACCATGCTAA 702 0.4003 MAANKAMAAQEGYLDPNDPSLSWERLLQIAKRIAKGLEYLHSGCNPQTLHFDIKPNNIFLDKSFYPKISDSGQAKLCSRTHSTVSVPGARGTAGYIALKIWNRNFGGASHKSEVFSYGMLILKMAGGRQDINGEGSDSSDKYFPHFVYKQIAVDKNITEHDDMMLGLWCVRTMPSDRPVMSRVIEVLKGSLEQLSILPKPSIFSPTPQLADLCKYSDELCGSPFSQFCVSVPC 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3301g00044 233 Gene3D Transferase(Phosphotransferase) domain 1 11 196 - -
Pral3301g00044 233 Pfam Protein kinase domain 21 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3301g00044 233 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 204 IPR045874 GO:0004672
Pral3301g00044 233 SUPERFAMILY Protein kinase-like (PK-like) 13 211 IPR011009 -
Pral3301g00044 233 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3301g00044 Pral-Chr3301 357673 358949 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3301g00044 21 218 Receptor kinase-like Gene Family AT5G38280 42.723 2.49e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3301g00044 Pkinase 2.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3301g00044 - - gmx:100781977 254.603