Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3301g00031 ATGTCTGCTTCCAAGAGCGAGAGCAGTTGTAGTGAAGATGATAATGAACTTAGGAGAGGACCTTGGACTCTTGAAGAAGATACTCTGTTAACAGAGTACGTCTCTGCTCATGGGGAAGGACGATGGAATTTGCTGGCAAAACGTTCAGGGTTGAAGAGAACGGGAAAGAGCTGCAGATTAAGATGGCTTAATTATCTGAACCCACAGGTAAAGCGAGGAAATTTATCCCCAGAAGAGCAGATTTGGATCCTTCAACTCTACTTAGAGTGGGGCAGCAGGTGGTCAAAGATCGCACAGCGACTTCCAGGGAGGACAGACAATGAAATCAAGAACTATTGGAGAACTCGGATTCAGAAACAAGCAAGACACTTGAATATTGACACAAACAGCGCGGAGTTTAAAGAAATCGTGAGGCGAATTTGGATTCCAAGATTGCTGCAGAAAGCGAGAGAAACAGCTTCTCCTCCTCCTCCTCCTCCTCCACCACCACCTGCTCCTGCTATGTTAATCCAAAACCAAAAGATTCCTTTGCCTATTGACAGTGTTTCCCTGTGTTCACAGATAGGGACAGTTCCAACACAGTTTCCTTGGCAGGGACCTTGTGGGATGAATGAAACAGTTCAAAACAGTTCCTGCGTGTCTTCTTCTTCCTCAGAATCATCAAACATCCCAGAAGTGTCTCAGTTTCAGGCTTTAGATGCCAGTGACATGAGCTCCTTTATGTATGATGGACACTATGTTAATAACAATACTTACGACATGGAAACATTCAATCTGGGAACGACAGTGACAGCTGAGGCTACTATGGTAGGAAACTGGATGAACAATGATGTTACATGCAGCATGTGGGGCACGGATGAACTGTGGCAGTTCAAAAACTAG 882 0.449 MSASKSESSCSEDDNELRRGPWTLEEDTLLTEYVSAHGEGRWNLLAKRSGLKRTGKSCRLRWLNYLNPQVKRGNLSPEEQIWILQLYLEWGSRWSKIAQRLPGRTDNEIKNYWRTRIQKQARHLNIDTNSAEFKEIVRRIWIPRLLQKARETASPPPPPPPPPPAPAMLIQNQKIPLPIDSVSLCSQIGTVPTQFPWQGPCGMNETVQNSSCVSSSSSESSNIPEVSQFQALDASDMSSFMYDGHYVNNNTYDMETFNLGTTVTAEATMVGNWMNNDVTCSMWGTDELWQFKN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3301g00031 293 FunFam Myb transcription factor 19 71 - -
Pral3301g00031 293 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Pral3301g00031 293 Gene3D - 19 71 - -
Pral3301g00031 293 Gene3D - 75 139 - -
Pral3301g00031 293 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Pral3301g00031 293 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Pral3301g00031 293 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Pral3301g00031 293 CDD SANT 76 115 IPR001005 -
Pral3301g00031 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 70 IPR017930 -
Pral3301g00031 293 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 237 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pral3301g00031 293 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Pral3301g00031 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 121 IPR017930 -
Pral3301g00031 293 SMART sant 71 119 IPR001005 -
Pral3301g00031 293 SMART sant 18 68 IPR001005 -
Pral3301g00031 293 CDD SANT 21 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3301g00031 Pral-Chr3301 241940 243331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3301g00031 14 292 MYB Transcription Factor Family AT1G68320 44.211 5.59e-76 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral3301g00031 Myb_DNA-binding 4.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3301g00031 K09422 - gmx:778042 357.066