Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3301g00030 ATGGCTGAATTCACAACAGATTTTCAAAGTTTTAGACCCTCCTTTCCTTTCTTAGACGTTGATCCAAACTTGGAACTTATAAACCAGTTCACAGGCATGATGAGCCCCCTTGTCCTGGACAACTCTAATCTCAATGTCCAGAGCTTGATTCCCTTCTCTCAAGAACCTGATTTTCCAGAAAATTTCCCCGTTTTACCGGCAGAAAATGAAATCCAGGATAGTCAAAAGAGGAAAGCGATGGATGTTACGGAAACCAGTTCTGTAAGTCCAACTCCTGCAGTTTCTGAGAGTGGAAGCAAGGTCGTTAGTAGTTCTGGAAGAGGTAAGAGAACAAAGAGCAATGTAGCAGAAGAAGGTAAACCAAAGGAAGTGGTTCATGTCAGGGCCAGAAGAGGTCAAGCTACAGACAGTCACAGTTTAGCAGAAAGGGTCAGAAGGGGGAAAATCAACGAAAAAATAAGACGCTTGCAGACCATTGTCCCAGGATGCTACAAGACCATGGGTATGGCGGTGATGTTGGACGAGATTATAAACTATGTCCAGTCCTTGCAGCATCAGGTGGAGTTTCTATCTATGAAGCTGACTGCGGCAAGCACCTTCTACGATTTCAATTCAGAGACAGACGCTATAGAAGCAATGCAGAGAGCAAGGGCATTCAAGGCAAAAGGATTATCCTCAAGAAATGATAGTGAAGAAGGATATGGCGGAGGGGTTTCTTGCTTTCATCCAACTTGGCCTCTCTAG 744 0.4435 MAEFTTDFQSFRPSFPFLDVDPNLELINQFTGMMSPLVLDNSNLNVQSLIPFSQEPDFPENFPVLPAENEIQDSQKRKAMDVTETSSVSPTPAVSESGSKVVSSSGRGKRTKSNVAEEGKPKEVVHVRARRGQATDSHSLAERVRRGKINEKIRRLQTIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFNSETDAIEAMQRARAFKAKGLSSRNDSEEGYGGGVSCFHPTWPL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3301g00030 247 CDD bHLH_AtBPE_like 123 208 - -
Pral3301g00030 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 183 IPR011598 GO:0046983
Pral3301g00030 247 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 207 IPR024097 GO:0006355
Pral3301g00030 247 SMART finulus 139 189 IPR011598 GO:0046983
Pral3301g00030 247 Pfam Helix-loop-helix DNA-binding domain 137 184 IPR011598 GO:0046983
Pral3301g00030 247 MobiDBLite consensus disorder prediction 71 122 - -
Pral3301g00030 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 201 IPR036638 GO:0046983
Pral3301g00030 247 MobiDBLite consensus disorder prediction 81 110 - -
Pral3301g00030 247 Gene3D - 130 201 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3301g00030 Pral-Chr3301 227455 228951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3301g00030 1 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 45.683 3.20e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral3301g00030 HLH 3.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3301g00030 - - gmx:100806942 313.923