Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3301g00012 ATGAATACACAATCTGACAGTTGCAGTGTAGACCTCAGAGAAATAGACAATTTAAGTGCCATTTCCAATGGAACTAATTTTGGGCATTCAGTATCCAGTCATGGTGAAATTGAAGCCAAACATCGAGTGATCTTGGTTAAATGGTTAAACAGTCTATTTCCCTCATTAAACTTGCCAAAGAATATTAAGGACGATGATTTAAGAGAATGCTTGAGTGACGGCACAGTTCTATGTCAGATATTAAACAAGCTATGGCCTGGCTCTGTGAATGTGGTCAGTGATGGTGATCACTCTTCCCCATCAAACTCGGAAAATATCAAAAGGTTTCTGGCAGCTATAGATGGTCTAGGGCTGCCTCAGTTTGATGCATCAGAACTAGAGAAGGGATCTTTAAAGCATGTTGTGGACTGCCTTTTAAAACTTAGAAGCTTACATAGCTCTTCGGGAGATGATAATATTTCTGTACTTAGTTTCAAATCAGAGGGTTCCCGCGGACACGCATCTCGTAGTTCTCCAACATCAGGAGAAGAGAATAAAAGGTTTTCATCTGACTCAAAGTCAAAGTTACAACGTGTATTACGGCCACTACCACAGCATGTTGTGCATAAACTCCATGAAACGCATAGCGCAGGGCATAAGTTCCATGAAATGTTTCAACCGAAAAATGGAAGCTTTGTAGATATGCCTTCCTCAAAAGTTTCAGAGATAATGAAATCGAACAGTATAGAGAATGCTTCTACTCAATATGTTCTAACTTTCATGAATGGTATTCTAGATGAAAGTGCTGAAAGAAGAAATGGCGAAATACCTCACGTATGGTTGCGTGTGGTCCCCTTGTTGAAAAAGATTGTCCAGGAAATTGAGCGACGTATATCAATTCAGGCAGAACATTTACGAACTCAAAACAATATTTTAAGGGTTCGTGATGAAAAATATCAATCAAGAATCAGAGTTCTTGAGGCACTTGCGTCTGGAACTAGAGAAGAAAGCGAGATGGTTGCAAACCAGCTTAAGCAGTTAACGGCTGAGAAGATCAGAGTGGAAGAAGAGAAGAAGGCTAGTGATGAAGAGTTGATTAGGTTGAAGGAAGAGATGGACCAGATAAATACAAAATTCTCAATGTTGAAGCTAGAACTAGAAACAACAAAAGACACGTGCTTACGGTTGGAAGCAGAAGCTGAGGGTGCTAAAGGAGAACTGAATCAGAAGTCAAAAGAATATGAACTTCAAATAAACGATTTAGTCCATAAGGTGACAGAACTTGAGGCTTCTTCTGACTCAAAGTATCATAAATGGAACATGGAGAAGAGCCAATTGCAGAAAGCTGTCGATTTTCAATCGAGTTCCCTACAGGTATGCTTACAAATGTGTGACGCCCAAGTTCTAATTATTCTTTGTTATCAAAAAATAAAATTGTCTTGGCAATCCATTGTGCAAGATATCTTGAAAGGGCAAAAAATGTACATGGAGGAATGCAAACAATTAGGTTCAGATCTTAAACCAATAGTGGATGCAACTAATAATTATCATGTTATTCTGGCTGAAAATCGAAGACTATTTAATGAAGTTCAAGAATTGAAAGGTAATATCAGAGTATATTGTCGAATCAGACCATTCCTCCCCGGACATAGGGAAAAAAGATCCATCATAGAACATATTAGTGAAACGGATTTGGTTGTAGCAAATCGTTCCAAACAAGGGAAAGAAGCCCTACGATCATTTCAGTTCAATAAGATCTTTGGTCCAACTGCATCTCAAGGTCTCTTCTTGATACCATTATGCTTTACTCATGTCTCATTTACTCTTGATGATGTAGAGGATGTATACTCTGACATACAACCCTTCATACGATCAGTACTTGATGGGTACAATGCATGCATATTTGCTTATGGCCAAACAGGTTCAGGGAAAACTTACACAATGAGTGGTCCTAATGGAGCGACAGAAGAGACTTATGGTGTTAATTATCGAGCTCTGAATGACCTCTTTAGCATTTCCAGTAGCAGAACAGGCTCTATAGTCTATGAGGTTTGGGTTCAGATGGTCGAGATATATAACGAACAAGTGCGCGATTTAATTATATGTTTCCTTGATTTGCACACACTTGGGATATTGACCCGGCCTCAACCCAAGGGCTTAGCTGTACCTGATGCCGGCATGTTCCGTGTTAATTCAACCTCAGATGTTTTGATGCTAATGGACATTGGACTGAAAAACAGAGCAATGGGTGCCACTGCTATGAATGAAAGGAGTAGTCGTTCTCACAGTGTGGTCTCAATTCATGTTCGTGGGAAAGATATACACTCTGGTTCTTCTCTGCATGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGTTCTGAAGCAACTGGGGATAGGCTTAGGGAAGCACAGCATATAAACAAATCATTGTCTGCCCTTGGAGATGTCATTTTTGCCCTTGCACAGAAGAGCACCCATGTGCCATATAGAAATAGCAAACTTACTCAACTCCTGCAAAGCTCTCTTGGCGGTCATGCAAAGACCCTCATGTTTGTCCAACTTAATCCGGAAATAAATTCATTTTCTGAAAGTCTAAGTACATTAAAGTTTGCTGAGAGGGTCTCTGGAGTTGAATTAGGACCTGCACGAAGCACTAAAGATGGAAAAGATGTTAGAGAACTAATGGAGCAGGTTGCTTTTCTCAAAAACACAATTGCATTGAAAGATGAGGAGATTGAGCAGCTACACTCACTTAAAGATATGAGAAATGTCAATTCTGAGAAAGCCTCTTTGAGGTATGGATCTCCCTTTAAGGGCAGAGAATCCATAAGCAGTACTCCTAAGCGGGACCCTGCTGCATCAGGGGGACGAAATACACAGTGTGAAGCTCATTTCCATCAGCCAATGGATGGCCTAAAACAAGAAACTGAATTTTTCCAGTTTCCCAGAGTTGGAGGGAATAGTCCAGCAAGGCCAGAGATTTTTCGGTATGCAAGTGAAGATTATAGTGGAAGGCTGAGTGATTTCTCCGACGGTGGCTTTCTAGGAGCAGAAGCTGACGACTTTTTTGATAATAAAGTTCCCATTGAAAACAGAAAATCGCCACTTCGCATGGTGAAATCAAAACCGTCTCCAAAAACTGGTGGAGGACACACAGAGCGGAAGAGTCCTCTAAGGACAGAGATTTTTCGACATGCAAGTGCAGATTATGGGGGAACCCCAAGTGACTTTTCTGAACGGGGCCTTCGGAGAACCATCAAAGATGATTTGTTTGATAATAAAGTTGTCGCTGAAAAGAAGAAATCTCCATTCCGCACGATGAAATCAAATGTAGTATCGAAAGTTGGTCGAGTTTTGCCAAAAACAACCCAACCCTCACCGACCACCACAAGGGGAATCGCCAAGAAGTCACCAAGCACCATGGGCAGATTGAGAGGAGACAGCAAAGCTGCCAGATGA 3453 0.4092 MNTQSDSCSVDLREIDNLSAISNGTNFGHSVSSHGEIEAKHRVILVKWLNSLFPSLNLPKNIKDDDLRECLSDGTVLCQILNKLWPGSVNVVSDGDHSSPSNSENIKRFLAAIDGLGLPQFDASELEKGSLKHVVDCLLKLRSLHSSSGDDNISVLSFKSEGSRGHASRSSPTSGEENKRFSSDSKSKLQRVLRPLPQHVVHKLHETHSAGHKFHEMFQPKNGSFVDMPSSKVSEIMKSNSIENASTQYVLTFMNGILDESAERRNGEIPHVWLRVVPLLKKIVQEIERRISIQAEHLRTQNNILRVRDEKYQSRIRVLEALASGTREESEMVANQLKQLTAEKIRVEEEKKASDEELIRLKEEMDQINTKFSMLKLELETTKDTCLRLEAEAEGAKGELNQKSKEYELQINDLVHKVTELEASSDSKYHKWNMEKSQLQKAVDFQSSSLQVCLQMCDAQVLIILCYQKIKLSWQSIVQDILKGQKMYMEECKQLGSDLKPIVDATNNYHVILAENRRLFNEVQELKGNIRVYCRIRPFLPGHREKRSIIEHISETDLVVANRSKQGKEALRSFQFNKIFGPTASQGLFLIPLCFTHVSFTLDDVEDVYSDIQPFIRSVLDGYNACIFAYGQTGSGKTYTMSGPNGATEETYGVNYRALNDLFSISSSRTGSIVYEVWVQMVEIYNEQVRDLIICFLDLHTLGILTRPQPKGLAVPDAGMFRVNSTSDVLMLMDIGLKNRAMGATAMNERSSRSHSVVSIHVRGKDIHSGSSLHGNLHLVDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAQKSTHVPYRNSKLTQLLQSSLGGHAKTLMFVQLNPEINSFSESLSTLKFAERVSGVELGPARSTKDGKDVRELMEQVAFLKNTIALKDEEIEQLHSLKDMRNVNSEKASLRYGSPFKGRESISSTPKRDPAASGGRNTQCEAHFHQPMDGLKQETEFFQFPRVGGNSPARPEIFRYASEDYSGRLSDFSDGGFLGAEADDFFDNKVPIENRKSPLRMVKSKPSPKTGGGHTERKSPLRTEIFRHASADYGGTPSDFSERGLRRTIKDDLFDNKVVAEKKKSPFRTMKSNVVSKVGRVLPKTTQPSPTTTRGIAKKSPSTMGRLRGDSKAAR 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3301g00012 1150 Coils Coil 889 909 - -
Pral3301g00012 1150 Coils Coil 330 424 - -
Pral3301g00012 1150 PRINTS Kinesin heavy chain signature 622 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3301g00012 1150 PRINTS Kinesin heavy chain signature 776 794 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3301g00012 1150 PRINTS Kinesin heavy chain signature 745 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3301g00012 1150 PRINTS Kinesin heavy chain signature 825 846 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3301g00012 1150 PANTHER KINESIN-LIKE PROTEIN KLP-3 46 442 IPR027640 GO:0003777|GO:0007018
Pral3301g00012 1150 MobiDBLite consensus disorder prediction 1114 1134 - -
Pral3301g00012 1150 ProSiteProfiles Calponin homology (CH) domain profile. 39 146 IPR001715 GO:0005515
Pral3301g00012 1150 MobiDBLite consensus disorder prediction 927 957 - -
Pral3301g00012 1150 MobiDBLite consensus disorder prediction 937 951 - -
Pral3301g00012 1150 Gene3D - 31 149 IPR036872 -
Pral3301g00012 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 529 913 IPR027417 -
Pral3301g00012 1150 ProSiteProfiles Kinesin motor domain profile. 529 875 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3301g00012 1150 SMART ch_5 41 144 IPR001715 GO:0005515
Pral3301g00012 1150 SUPERFAMILY Calponin-homology domain, CH-domain 37 152 IPR036872 -
Pral3301g00012 1150 Pfam Kinesin motor domain 535 873 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3301g00012 1150 MobiDBLite consensus disorder prediction 155 188 - -
Pral3301g00012 1150 Pfam Calponin homology (CH) domain 42 144 IPR001715 GO:0005515
Pral3301g00012 1150 Gene3D Kinesin motor domain 472 877 IPR036961 -
Pral3301g00012 1150 SMART kinesin_4 527 883 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3301g00012 1150 MobiDBLite consensus disorder prediction 155 178 - -
Pral3301g00012 1150 MobiDBLite consensus disorder prediction 1035 1057 - -
Pral3301g00012 1150 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 471 877 - -
Pral3301g00012 1150 MobiDBLite consensus disorder prediction 1105 1150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3301g00012 Pral-Chr3301 145021 151325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3301g00012 517 909 Calmodulin-binding Proteins AT5G65930 36.041 1.55e-64 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3301g00012 K10406 - qsa:O6P43_008574 1061.21