Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3301g00011 ATGGCCTTCCCGCTATTTATAAACCTCCCCACCCTCTCTCACTTCTCCTACTTCCTTCCCTGCTCATTCCCATTTTCCCTCATTTTCTCGCCATTTTTCTCACCTCCCCGCCACGTTCCAACCACACGCCTCACCATGCGCCTCAGTTGCAATGGCTGCCGAGTGCTCCGTAAAGGTTGCACCGCTGATTGCCCCATTCGTCCCTGCCTCCTCTGGATTCCCTCTCCTAAATCCCAATCCAACGCCACCCTCTTCCTCGCCAAGTTCTACGGCCGCGCCGGCCTCATCAACCTCATCAATTCCGGAGCCCCCCACCTCCGACCAGCGATTTTTAAGTCCCTGCTCTACGAAGCCTGTGGGCGGATTGTGAATCCTATTTTCGGCTCAGCTGGGTTACTCTCTTCCGGAAGCTGGCATCTCTGTCAAGCCGCCGTTGAAGCTGTTCTCAGAGGCGAGCCGATCACGCAGGTTTCCCCCGAGTCGGCTTTTGATGGCGTGAGCCCGCTCCTGAAGTCGTGTGATATTCGACATGTGGGTAAAAAGGGAAATTCTTGCGCTTCTGATAAGCTCCACAAAGTGAGAAACGGGACCCAATTTAAACACTCCGGCGCGAAGAAGAAGAAGAAGCCGGAAGTGGAGCCGGTGCGCGAGGAGCTGATGGTTCATTCGGGGAGCGAGCTGGATGGTTCGGGGGTGAGCGAGCACAGAAGTGGAAGTCCTGGTGGTGACGCTGATAGCAGCACCGTGGAGACGGCGGAGAGATGGCCCGCATCGGCGAGGAGCGACGAGCGAAGCGAAGCTGAAGCCGAGGATGGGGGGTTAGAGCTGGAGCTGACCATGTGGTGGGGTCAACAAGCTAAGGGGATTAGGGATGTCAACGGTTCTGATGCTAGCACGTATAAGTTAACGATGGGCCCTGATCATTCTGGTTGA 933 0.5627 MAFPLFINLPTLSHFSYFLPCSFPFSLIFSPFFSPPRHVPTTRLTMRLSCNGCRVLRKGCTADCPIRPCLLWIPSPKSQSNATLFLAKFYGRAGLINLINSGAPHLRPAIFKSLLYEACGRIVNPIFGSAGLLSSGSWHLCQAAVEAVLRGEPITQVSPESAFDGVSPLLKSCDIRHVGKKGNSCASDKLHKVRNGTQFKHSGAKKKKKPEVEPVREELMVHSGSELDGSGVSEHRSGSPGGDADSSTVETAERWPASARSDERSEAEAEDGGLELELTMWWGQQAKGIRDVNGSDASTYKLTMGPDHSG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3301g00011 310 MobiDBLite consensus disorder prediction 240 254 - -
Pral3301g00011 310 MobiDBLite consensus disorder prediction 296 310 - -
Pral3301g00011 310 Pfam Lateral organ boundaries (LOB) domain 49 148 IPR004883 -
Pral3301g00011 310 MobiDBLite consensus disorder prediction 289 310 - -
Pral3301g00011 310 ProSiteProfiles LOB domain profile. 48 154 IPR004883 -
Pral3301g00011 310 MobiDBLite consensus disorder prediction 186 272 - -
Pral3301g00011 310 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 48 258 - -
Pral3301g00011 310 MobiDBLite consensus disorder prediction 206 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3301g00011 Pral-Chr3301 138933 140240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3301g00011 46 218 AS2 family AT3G02550 57.803 2.77e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral3301g00011 LOB 4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3301g00011 - - pcin:129288305 456.447