Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3300g00004 ATGCTGCCTCCATCTCCATTGTTACCTTCCCCTCCATTTCTCTTTCTTGCCGTATTTCTCTTCTTCACTCTATCACTTTTGCTCCTACTCTCTCGCTTCAAAACAACCAGAGATGGCCGGGAACAACCGCCAGGTCCACTGGCCTGGCCGGTGATCGGCAACCTCCACCTGTTGGGCACCCTCCCCCACCGTTCCCTTCACTCTCTGGCCAGACGATATGGCCCCATCATGTCCCTCCGACTAGGACAGGTGCCTGCCGTTGTCGTCTCTTCGCCTGAAGCTGCCGAGCTTTTCCTCAAGACGCACGACGTCGTTTTTGCCAGCCGCCCAAGGACTCAAGCGTCGGAGTTCCTTTCTTATGGCTCCAAGGGAATCGCTTTCGCTGAATATGGCCCTTACTGGCGCGACATGAGGAAGCTCTGTACTTTGCAGCTTTTTAGTGCGTCGAGAGTGGAGATGTTTCGTCCCATAAGAAGGGAGGAGTTGAGAGAGGCGGTGAAGTCGATAAAGGAATCGGCGGCGGCGCGTGATGTGGTGGATGTAAGTGAGAAGGTGGGGGAGGTGATAGAGGACATCATATATAGAATCATACTGGGACGCAAGAGAGACGATAGGTTTGATTTAAAGAGAATAGTTCAAGAGACGCTCAGCTTGTCAGGAGCTTTCAATATCGCAGACTTCTTGCCTTTCTTGCGCCCATTTGATATTCAGGGTTTTACAAAACGCTTAAAGACGAATGGTAAGGAAATTGATGAAATGTTAGAAACGATCATCAAAGAGCATGAAGAGGCACAAGCAGTACTGCAGAAAATGCAACACAAGGACATCGTGGACATATTACTCTCTTGCTTGAAGGATTCTCATGACGATGAACAAAATCCAGTCAAAGATCGAACCAATATCAAGGCCATACTTTTGGACTTGCTTTCTGGTGCAATAGACACTTCCGTCACTGTTAGTCTCTGGGTTTTCTCAGAACTCTTGAAGAATCCCAGAGTAATGAAAAAACTCCAACATGAGCTGGAAAACCTTGTAGGAAAAAGCAATTTGGTCGAGGAGGTTGATTTGCCGAGGTTGACTTACTTGGACATGGTGGTCAAAGAGACTTTGAGACTACATCCTGTTGCGCCACTGCTGCTCCCTCGAGTCAGCACCAAGGATATAACTATCAATGGATATTATATAAGGAACAAGTCACGAGTGATTGTGAATGTGTGGGCAATAGGACGGGATCCTAAGATATGGTCAGATAATGCGGAAGCATTTTATCCAAAGAGGTTCCTGAATAGCAATGTAGATCTCCGAGGAAAAGACTTCCAACTGATACCATTTGGTTCAGGTCGAACAGGATGCCCTGGCATGCAGTTAGGGTTAATTACTGTTAAGCTGGTTATAGCACAATTAATGCATTGCTTTAATTGGGAACTTCCACAAGGCGTTTCTCCTGATGAAGTGGATATGACTGAGAAATTTGGACTATTGATTCCAAGAGCTAATCACTTAGTAGCTCTTCCATCATATTGCCTAGCAGAGTGA 1536 0.4655 MLPPSPLLPSPPFLFLAVFLFFTLSLLLLLSRFKTTRDGREQPPGPLAWPVIGNLHLLGTLPHRSLHSLARRYGPIMSLRLGQVPAVVVSSPEAAELFLKTHDVVFASRPRTQASEFLSYGSKGIAFAEYGPYWRDMRKLCTLQLFSASRVEMFRPIRREELREAVKSIKESAAARDVVDVSEKVGEVIEDIIYRIILGRKRDDRFDLKRIVQETLSLSGAFNIADFLPFLRPFDIQGFTKRLKTNGKEIDEMLETIIKEHEEAQAVLQKMQHKDIVDILLSCLKDSHDDEQNPVKDRTNIKAILLDLLSGAIDTSVTVSLWVFSELLKNPRVMKKLQHELENLVGKSNLVEEVDLPRLTYLDMVVKETLRLHPVAPLLLPRVSTKDITINGYYIRNKSRVIVNVWAIGRDPKIWSDNAEAFYPKRFLNSNVDLRGKDFQLIPFGSGRTGCPGMQLGLITVKLVIAQLMHCFNWELPQGVSPDEVDMTEKFGLLIPRANHLVALPSYCLAE 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3300g00004 511 Coils Coil 254 274 - -
Pral3300g00004 511 Coils Coil 334 354 - -
Pral3300g00004 511 Gene3D Cytochrome P450 30 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 SUPERFAMILY Cytochrome P450 43 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 FunFam Cytochrome P450 83B1 29 504 - -
Pral3300g00004 511 CDD CYP71-like 72 501 - -
Pral3300g00004 511 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 PANTHER CYTOCHROME P450 93A3-LIKE 18 509 - -
Pral3300g00004 511 Pfam Cytochrome P450 43 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00004 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3300g00004 Pral-Chr3300 94565 97584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3300g00004 43 506 Cytochrome P450 AT3G48310 40.430 9.53e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3300g00004 - - qsa:O6P43_007971 615.535