Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3300g00001 ATGCTGCCTTCTTCCTCTTTGCCCTTCCCTTCCCTTCTCCTTCTTCCACTTCTCTTCCTTCTCTCAGCTCTGTTCCTATCCCTGTGCCTTAGACGAACTAAGCATGGCCTGAAACAACCCCCAGGGCCACCGGCCTGGCCGGTGATCGGCAACCTCCACCAGTTGGGTACTCTCCCGCACCGATCCCTTCAGTCTCTCGCGAAGCGCTATGGACCCATCATGTCCTTGCGACTCGGACAGGTCCCTGCTGTTGTCGTCTCTTCCCCTGAAGCCGCCGAGCTTTTCCTCAGGACGCACGACGTCGTTTTTGCCAGCCGCCCAAGGACTCAAGCGTCGGAGTTCCTTTCTTATGGCTCCAAGGGGATGGTTTTCTCTGAATATGGCCCTTACTGGCGCGATATGAGGAAGCTCTGTACTTTGCAGCTTGTTAGCTCGTCGAAATTGGAGACGTTTGCTCCCTTAAGAAGGGAGGAGTTGGGACAGCTGGTGAAGTCGATTGAGAAGTCGGCGGCGGCGAGTGAGGTGGTGGATCTGACGGGGAAGGTGGAGCGGCTTGTAGAAGACATAATGTATAAAATGATATTTGGACGCAACAGGGACGATAGATTTGGTCTGAAGGGTCTTATTCATGAAGCGCTGAACTTGGTTGGAGCCTTCAATATTGCAGATTTCGTGCCTTTCTTGGCACCATTTGATATCCAGGGCTTGACACGAAAGTTAAAGAGAAACTACAAGGCGCTCGAGGATGTGTTGGATAAGATAGTGATGGAGCATGAAAACACTTCAAAAGGACAAAATTTACAACACCATAACGACTTCATACACATATTGCTTTCCTTGATGCACCAACCTGTGGATCTACAGGACGACCAAGACCATGTGATAGATAAAGCCAACATCAAAGCTATTTTATCAGATATGGTTGGAGGGGCAACTGACACTTCTATTGTTGTAATTGAGTGGGCTTTATCCGAACTTTTGAGGCATCCAAGAGTGATGAAAAATCTTCAAAATGAGCTACAAAACGTTGTTGGAATGACGAGAATGGTGGAAGAGTCTGATTTAGCAAAGTTAAGTTATTTAGATATGGTAATCAAAGAGACTCTTAGACTATATCCAGTTGCACCTTTACTTGTCCCTCGAGAGAGTATGGAGGATGTTACAATCAACGGGTGCTATATAAGGAAAAAGACAAGGGTAATTGTAAATGTGTGGGCCATAGGACGTGATTCTAAGGTTTGGTCTGAAAACGCGCATATGTTCCATCCTGAGAGATTTGTTGACAGCAATATTGACGTTCGAGGACACGATTTTCAACTGTTACCATTTGGCTCAGGTCGCAGAGGTTGTCCTGGCATGAACTTGGGTATGACTAGTGTTAAATTTGTTTTAGCTCAATTGGTTCATTGCTTTTCTTGGGAACTTCCTTATGGTATGTCTTCCAGTGACTTGGACATGAATGAAGAGTTTGGTCTCTCAATTCCAAGAGCCAAGCATTTGCTAGCAGTTCCAACTTATCGTTTACATACGTAA 1533 0.4618 MLPSSSLPFPSLLLLPLLFLLSALFLSLCLRRTKHGLKQPPGPPAWPVIGNLHQLGTLPHRSLQSLAKRYGPIMSLRLGQVPAVVVSSPEAAELFLRTHDVVFASRPRTQASEFLSYGSKGMVFSEYGPYWRDMRKLCTLQLVSSSKLETFAPLRREELGQLVKSIEKSAAASEVVDLTGKVERLVEDIMYKMIFGRNRDDRFGLKGLIHEALNLVGAFNIADFVPFLAPFDIQGLTRKLKRNYKALEDVLDKIVMEHENTSKGQNLQHHNDFIHILLSLMHQPVDLQDDQDHVIDKANIKAILSDMVGGATDTSIVVIEWALSELLRHPRVMKNLQNELQNVVGMTRMVEESDLAKLSYLDMVIKETLRLYPVAPLLVPRESMEDVTINGCYIRKKTRVIVNVWAIGRDSKVWSENAHMFHPERFVDSNIDVRGHDFQLLPFGSGRRGCPGMNLGMTSVKFVLAQLVHCFSWELPYGMSSSDLDMNEEFGLSIPRAKHLLAVPTYRLHT 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3300g00001 510 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 Gene3D Cytochrome P450 26 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 FunFam Cytochrome P450 83B1 27 503 - -
Pral3300g00001 510 Pfam Cytochrome P450 40 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 PANTHER CYTOCHROME P450 93A3-LIKE 17 509 - -
Pral3300g00001 510 SUPERFAMILY Cytochrome P450 32 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 CDD CYP71-like 69 500 - -
Pral3300g00001 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Pral3300g00001 510 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3300g00001 510 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3300g00001 Pral-Chr3300 10599 19550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3300g00001 34 508 Cytochrome P450 AT5G57260 40.329 1.35e-129 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3300g00001 - - pcin:129301104 689.493