Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3299g00009 ATGGATTTAGAAGAAAAGTTCCTTGCTAAAGTTTCTGGTCTTCAAAGCCTTTCTTCCAGCGTGCAAAGCACTCCAGAGAAAAATGGCCATTCAGATGATGCTTCAAGAAGTCCAGAACTCCTGCAGGAGTTCCTTAAATCTGGTCCAAAAAAGGAACTTCTGCGGACATGCTTTGATAAAGACAAAAAGAACATTTCAGCAAAAGGCAGGGTGATTGAAAATAAGTCAAGTAAGGCAACCAAGAAACAGGACTCAAAAAAGGTTTCTAGCAGTAACCAGTCCTCTAAAAAGCAACATAGAAAGGGAGAAAATCCCACAAGACTCCTGCCAACGCCTGACCAGTCTTCGGATTTTGGGCATACAAACTCCTGGATCTGTAAAAATTCTGCCTGTAGAGCTGTTCTGTCTATAGACGACACATTTTGTAGAAGGTGCTCTTGTTGTATCTGTCACCTTTTTGATGATAACAAGGATCCTAGTCTTTGGTTGGTCTGCACATCTGAATCTGCTCAGGGTGATTCCTGTGGGTTATCTTGCCATATCGAGTGTGCCATCCAACATGAAAAAGTGGGAGTTGTTGATCATGGGCAATTGATGCAACTAGATGGTGGCTATTGTTGTGCAACTTGTGGTAAAGTTACGGGGATACTTGGATGTTGGAGAAAGCAGCTAAGTATAGCAAAGGATGCTCGACGTGTTGATGTACTCTGTTATAGAATATATTTGAGCTACAGGCTTCTAAATGGGACTTCAAGGTTTAAAGAACTCCATGAGATTGTGCAAGAGGCGAAGGCTAAACTGGAAACAGAAGTTGGTCCAGTTAATGGTGTTTCTGCCAAGATGGCAAGGGGCATTGTCAGCAGACTCTCTATTGCGAGTGATGTGCAGAAATTGTGCTCCCTTGCTGTTGAGAAAGCTGACGAGTGGCTGGCCTCTGTTTCCAGCGAAAATCCAGATTCCAGAGAAGGTTCGCTCCCTGCTGCCTGCAAGTTTGTTTTTGAAGAGGTGATGGCTTCCTCAGTCAAAATCATTTTGATTGAAATGTCTAATTCATCTTCTGAGGACATCAAGGGTTTCAAGCTCTGGTATTACAAAAGTGGGGAGGAACTGCACACTAAAGATCCTGTTTGTGTTTTCCCGAAATCTCAGAGGAGGATTCTGATATCAAACCTCCAACCTTGCACAGAATATACATTTCGGATTGTATCTTACACAGATACATGTGATCGGGGTCATTCTGAGGCCAAGTGTTTCACTAAGAGCATTGAAATAATTAGAAAAAATCCTTCTTCATTGGCTGCTCCGAATCATAATAAAGAGAACCATAAAACTGGAGGCACTTCTTCTGACCCCAAAACGGAGCCCAATCCCACAATGGCGGACTGTGGATTTAAGGTTCGAGATCTTGGAAAAGTTCTGCGCCTTGCTTGGGCTCAAGAACAAGGTTGCTTTGAGGGTTTTTGCTGTGCTGATGTGAAAAATTGCTGTGGAGGAAGTGAAATGGTCGGACCTAAATATTCAGAAGAGACATTGCCTAAAGTTTCGAGAGGCCTTGATTTAAATGTTGTTTCAGTTCCTGATTTAAATGAAGAATTAACACCACCTTTTGAGTCTTCTAGGGATGAAGATAACGGTTGCACCTTGCAGCAGGCTACTGGGGCTGATGATGATGCTGCTTCTCATGATATTGAGAAGGTTGGTTTAGCAAGATCCCATGGCAGTGGTGATTCGCAAACCTGGACCCACAGGCCAACTGGAGAAGTGCCAGCTGTTGATTCACGTGTAGATGCTGCATGCAGGAAAAGAGTGGCAAGCACAAATGAAGAGACTCATGATTGTGACAGCACTTTGATAAATGGATCTCCTTTACGCATTTCTGATGGATCTTGTTCCCTGGATGAGAACTTTGAGTATTGTGTTAAAGTAATTCGTTGGCTAGAATGTGAGGGCCACATTAAGCAGGAATTTCGGTTGAAATTGCTAACATGGTTTAGTTTGAGGTCAACAGAGCAAGAACGTAGGGTGGTCAATACCTATATTCAAACTCTGATTGATGACCCTAGTAGTTTGGCTGGACAACTGGTTGACTCTTTTTCTGATATTATATCTAACAAGAGGCCAAGAAATGGATTCTGTGGTAAGCTTTGGCATTAA 2154 0.4271 MDLEEKFLAKVSGLQSLSSSVQSTPEKNGHSDDASRSPELLQEFLKSGPKKELLRTCFDKDKKNISAKGRVIENKSSKATKKQDSKKVSSSNQSSKKQHRKGENPTRLLPTPDQSSDFGHTNSWICKNSACRAVLSIDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESAQGDSCGLSCHIECAIQHEKVGVVDHGQLMQLDGGYCCATCGKVTGILGCWRKQLSIAKDARRVDVLCYRIYLSYRLLNGTSRFKELHEIVQEAKAKLETEVGPVNGVSAKMARGIVSRLSIASDVQKLCSLAVEKADEWLASVSSENPDSREGSLPAACKFVFEEVMASSVKIILIEMSNSSSEDIKGFKLWYYKSGEELHTKDPVCVFPKSQRRILISNLQPCTEYTFRIVSYTDTCDRGHSEAKCFTKSIEIIRKNPSSLAAPNHNKENHKTGGTSSDPKTEPNPTMADCGFKVRDLGKVLRLAWAQEQGCFEGFCCADVKNCCGGSEMVGPKYSEETLPKVSRGLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQATGADDDAASHDIEKVGLARSHGSGDSQTWTHRPTGEVPAVDSRVDAACRKRVASTNEETHDCDSTLINGSPLRISDGSCSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTYIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFCGKLWH 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3299g00009 717 Gene3D Immunoglobulins 327 422 IPR013783 -
Pral3299g00009 717 MobiDBLite consensus disorder prediction 540 554 - -
Pral3299g00009 717 MobiDBLite consensus disorder prediction 532 559 - -
Pral3299g00009 717 MobiDBLite consensus disorder prediction 11 40 - -
Pral3299g00009 717 PANTHER VIN3-LIKE PROTEIN 2-RELATED 16 717 IPR044514 GO:0010048|GO:0040029
Pral3299g00009 717 SUPERFAMILY Fibronectin type III 336 414 IPR036116 GO:0005515
Pral3299g00009 717 MobiDBLite consensus disorder prediction 68 85 - -
Pral3299g00009 717 CDD FN3 355 406 IPR003961 GO:0005515
Pral3299g00009 717 Pfam PHD - plant homeodomain finger protein 126 244 IPR032881 -
Pral3299g00009 717 ProSiteProfiles Fibronectin type-III domain profile. 325 424 IPR003961 GO:0005515
Pral3299g00009 717 MobiDBLite consensus disorder prediction 68 116 - -
Pral3299g00009 717 MobiDBLite consensus disorder prediction 431 455 - -
Pral3299g00009 717 MobiDBLite consensus disorder prediction 12 28 - -
Pral3299g00009 717 MobiDBLite consensus disorder prediction 429 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3299g00009 Pral-Chr3299 50460 56616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3299g00009 87 710 PHD Gene Family AT3G24440 47.261 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3299g00009 - - gmx:100780157 1186.79