Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3299g00006 ATGGCAAGCCGACTAAAGGAAGATGAGAAGAATGAACGAATAATTAGGGGCCTCCTGAAACTTCAAGAGAACCGCAGGTGTATTAATTGCGGCAGCCTGGGACCACAATATGTATGCACAAATTTTTGGACGTTCGTTTGCACAAACTGTAGTGGAATACACCGGGAATTCACACATCGAGTTAAATCAATTTCAATGGCTAAATTTACTTCGCAAGAAGTTAGTGCCCTTCAAGAAGGAGGAAATCAGCGTGCAAAGGAAATTTATTTTAAAGAATGGGATCCACAACGTCATTCTCTTCCCGATAGCAGTAACATTGACAGGCTCCGAGACTTTATTAAGCATGTTTATGTGGATAGAAGATATAGTGGTGAGAGGAACTATGACAAACCACCAAGAGGAAAGATGGGTGACAAGGATGATTCCTATGAAAACAGAAGGGTTGAGACATATCAGGGAGGATCTAAAAGTCCACCATATGAGGATGCATATGAACGTCGTTATAGTGACAGGTCTAGTCCTGGTGGCAGAAGTCCTGGATATGATCAAGAAAGTAGACAATATGGTGATTACAGGAAAAGCCCAGGCCGTCCTCCAATAATCAATGATTGGCGTCGTGAAGACAGATTTGGAGATGTTAGAAGATTTGAAGATCGTAGAACATCTGATGGAGATTATAAACTGGAAGGCCAATCGCCAGAGCGAGCAAAAGATGTTGATTCTTCAAGTTCACCTGTTGTACGGCCTGTAAGAGATATATTGGGAGAAAATGTGGTTCCTCTTCGAATAAGTGAGCCCCCCAAAACAAACAGTGGAAAGGCTTCTGATGGCTCTGCACTCACACAGAGAACTGCATCTTCGAGTAGCTTAGCATCTAGTAATGGAAATGCAGCAGAAGTTAAGCTTGAGACTACTAAGAGCCTTATTGATTTTGATGCTGAGCCTGAACCTCCCGTTGCTCCAGCAATTCCTCAAGCACAACAAACTACTGCCGTCCAACCTGCTGTGCAGCCAGCAAATTCTAGTGATGACAACTGGGCATCTTTTGATGTTGCCCCTGCAGCAAAGACAACCCAAGGTCCTTCAAATTTAAGTCCACTTGAATCTGTTCTCTCACAACTATCAATGCCTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGCAGCTCCTCAGGTTTCTGGAGTTCAAGGACATCTGCCAGCATCAGCTGTCACTGCCAGTGGAGCTGGAGCTGGAACTGGAACTGGAACTCTTGGCAACTTCTCATCAGTACCACCAAGTGGTACTGCTGTAACAGCCCCTGGGTTGATGACAGTGCCACCAATCAACAATGCAGGCCAGTGGGCCAGTGTGCAACACAACCGTCCTGTATTCCCTACCACTGGGAGCCATCCTACTACTCAACAATTCATTCCATCAGCAGGTGGATCTTTGAACAGTCAGTGGAGTGTATCTCCAGTGCCCACAATGCAAGGGCACCCTGGCATACAAATGCCGCATGCATCCCCTCTTACCGCAAAACCTACCAATGAGGTTAGCTCTAGTGCTGCTTTACAGCCTTCAAAAGAAGTGCAACCAGGTGGAAGAAAAGAACTTCCTGAGGATCTCTTCACCGCAAGGTATTCATCCTTTGCTTCTCCAGCGCCAGGGTGGCAAATGGGTCCTCCCCAGGGCATGGGTATCTATATGCAATATCATACTGCAGCGCCCATGCCAAGTTTTCCACAGTCATCAAAATCGACAAATCCATTTGATGTCAGCAGTGAACCACCTCCAGTTCAAGCCCCAACATTTCCTTCCATGTCATCCTTGCAAGGTGCTCTGCCAAGTATACCACCTTCTTCCGGTGTAATACATCCCCCAAGCCTGGGTAATCCACCACTTTCCTGGAGCTCACCCCAGTCATCATACGGTTCAGTACTTCCTCCGCAAGCTCAAGTTCATGCAGCAGCAATGGCGCCAAGGGCATACGTCGGGCAACAAGTGCCAACTAACATGCCAATGCCTAGGCACCAGGAAATTGGGAATTCTGGCACACATGGAGCTGCTTTTGGCTTCTCAAATCCAGATAAGCAGATAACTGGTATGTTCTCAACCCCTGCTGCGGCAAATTCCTTCTCTGCTGGAGGCAACCCCTTTGGTTGA 2169 0.4772 MASRLKEDEKNERIIRGLLKLQENRRCINCGSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQRAKEIYFKEWDPQRHSLPDSSNIDRLRDFIKHVYVDRRYSGERNYDKPPRGKMGDKDDSYENRRVETYQGGSKSPPYEDAYERRYSDRSSPGGRSPGYDQESRQYGDYRKSPGRPPIINDWRREDRFGDVRRFEDRRTSDGDYKLEGQSPERAKDVDSSSSPVVRPVRDILGENVVPLRISEPPKTNSGKASDGSALTQRTASSSSLASSNGNAAEVKLETTKSLIDFDAEPEPPVAPAIPQAQQTTAVQPAVQPANSSDDNWASFDVAPAAKTTQGPSNLSPLESVLSQLSMPAPAPAPAPAPAPAPAPAPAAPQVSGVQGHLPASAVTASGAGAGTGTGTLGNFSSVPPSGTAVTAPGLMTVPPINNAGQWASVQHNRPVFPTTGSHPTTQQFIPSAGGSLNSQWSVSPVPTMQGHPGIQMPHASPLTAKPTNEVSSSAALQPSKEVQPGGRKELPEDLFTARYSSFASPAPGWQMGPPQGMGIYMQYHTAAPMPSFPQSSKSTNPFDVSSEPPPVQAPTFPSMSSLQGALPSIPPSSGVIHPPSLGNPPLSWSSPQSSYGSVLPPQAQVHAAAMAPRAYVGQQVPTNMPMPRHQEIGNSGTHGAAFGFSNPDKQITGMFSTPAAANSFSAGGNPFG 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3299g00006 722 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Pral3299g00006 722 MobiDBLite consensus disorder prediction 221 298 - -
Pral3299g00006 722 MobiDBLite consensus disorder prediction 511 529 - -
Pral3299g00006 722 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Pral3299g00006 722 MobiDBLite consensus disorder prediction 378 396 - -
Pral3299g00006 722 MobiDBLite consensus disorder prediction 268 298 - -
Pral3299g00006 722 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Pral3299g00006 722 MobiDBLite consensus disorder prediction 581 596 - -
Pral3299g00006 722 MobiDBLite consensus disorder prediction 581 648 - -
Pral3299g00006 722 MobiDBLite consensus disorder prediction 124 147 - -
Pral3299g00006 722 PANTHER ARFGAP/RECO-RELATED 1 722 IPR044820 GO:0005096
Pral3299g00006 722 MobiDBLite consensus disorder prediction 505 537 - -
Pral3299g00006 722 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Pral3299g00006 722 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Pral3299g00006 722 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Pral3299g00006 722 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Pral3299g00006 722 CDD ArfGap_AGFG 12 122 - -
Pral3299g00006 722 MobiDBLite consensus disorder prediction 221 236 - -
Pral3299g00006 722 MobiDBLite consensus disorder prediction 312 347 - -
Pral3299g00006 722 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Pral3299g00006 722 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Pral3299g00006 722 MobiDBLite consensus disorder prediction 124 205 - -
Pral3299g00006 722 MobiDBLite consensus disorder prediction 375 404 - -
Pral3299g00006 722 MobiDBLite consensus disorder prediction 323 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3299g00006 Pral-Chr3299 17043 24379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3299g00006 12 122 C2H2 Transcription Factor Family AT4G21160 33.333 2.46e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3299g00006 - - gmx:102669541 901.738