Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3299g00005 ATGGCAAGCCGACTAAAGGAAGATGAGAAGAATGAACGAATAATTAGGGGCCTCCTGAAACTTCAAGAGAACCGCAGGTGTATTAATTGCGGCAGCCTGGGACCACAATATGTATGCACAAATTTTTGGACGTTCGTTTGCACAAACTGTAGTGGAATACACCGGGAATTCACACATCGAGTTAAATCAATTTCAATGGCTAAATTTACTTCGCAAGAAGTTAGTGCCCTTCAAGAAGGAGGAAATCAGCGTGCAAAGGAAATTTATTTTAAAGAATGGGATCCACAACGTCATTCTCTTCCCGATAGCAGTAACATTGACAGGCTCCGAGACTTTATTAAGCATGTTTATGTGGATAGAAGATATAGTGGTGAGAGGAACTATGACAAACCACCAAGAGGAAAGATGGGTGACAAGGATGATTCCTATGAAAACAGAAGGGTTGAGACATATCAGGGAGGATCTAAAAGTCCACCATATGAGGATGCATATGAACGTCGTTATAGTGACAGGTCTAGTCCTGGTGGCAGAAGTCCTGGATATGATCAAGAAAGTAGACAATATGGTGATTACAGGAAAAGCCCAGGCCGTCCTCCAATAATCAATGATTGGCGTCGTGAAGACAGATTTGGAGATGTTAGAAGATTTGAAGATCGTAGAACATCTGATGGAGATTATAAACTGGAAGGCCAATCGCCAGAGCGAGCAAAAGATGTTGATTCTTCAAGTTCACCTGTTGTACGGCCTGTAAGAGATATATTGGGAGAAAATGTGGTTCCTCTTCGAATAAGTGAGCCCCCCAAAACAAACAGTGGAAAGGCTTCTGATGGCTCTGCACTCACACAGAGAACTGCATCTTCGAGTAGCTTAGCATCTAGTAATGGAAATGCAGCAGAAGTTAAGCTTGAGACTACTAAGAGCCTTATTGATTTTGATGCTGAGCCTGAACCTCCCGTTGCTCCAGCAATTCCTCAAGCACAACAAACTACTGCCGTCCAACCTGCTGTGCAGCCAGCAAATTCTAGTGATGACAACTGGGCATCTTTTGATGTTGCCCCTGCAGCAAAGACAACCCAAGGTCCTTCAAATTTAAGTCCACTTGAATCTGTTCTCTCACAACTATCAATGCCTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGCAGCTCCTCAGGTTTCTGGAGTTCAAGGACATCTGCCAGCATCAGCTGTCACTGCCAGTGGAGCTGGAGCTGGAACTGGAACTGGAACTCTTGGCAACTTCTCATCAGTACCACCAAGTGGTACTGCTGTAACAGCCCCTGGGTTGATGACAGTGCCACCAATCAACAATGCAGGCCAGTGGGCCAGTGTGCAACACAACCGTCCTGTATTCCCTACCACTGGGAGCCATCCTACTACTCAACAATTCATTCCATCAGCAGGTGGATCTTTGAACAGTCAGCAGTGGAGTGTATCTCCAGTGCCCACAATGCAAGGGCACCCTGGCATACAAATGCCGCATGCATCCCCTCTTACCGCAAAACCTACCAATGAGGTTAGCTCTAGTGCTGCTTTACAGCCTTCAAAAGAAGTGCAACCAGGTGGAAGAAAAGAACTTCCTGAGGATCTCTTCACCGCAAGGTATTCATCCTTTGCTTCTCCAGCGCCAGGGTGGCAAATGGGTCCTCCCCAGGGCATGGGTATCTATATGCAATATCATACTGCAGCGCCCATGCCAAGTTTTCCACAGTCATCAAAATCGACAAATCCATTTGATGTCAGCAGTGAACCACCTCCAGTTCAAGCCCCAACATTTCCTTCCATGTCATCCTTGCAAGGTGCTCTGCCAAGTATACCACCTTCTTCCGGTGTAATACATCCCCCAAGCCTGGGTAATCCACCACTTTCCTGGAGCTCACCCCAGTCATCATACGGTTCAGTACTTCCTCCGCAAGCTCAAGTTCATGCAGCAGCAATGGCGCCAAGGGCATACGTCGGGCAACAAGTGCCAACTAACATGCCAATGCCTAGGCACCAGGAAATTGGGAATTCTGGCACACATGGAGCTGCTTTTGGCTTCTCAAATCCAGATAAGCAGATAACTGGTATGTTCTCAACCCCTGCTGCGGCAAATTCCTTCTCTGCTGGAGGCAACCCCTTTGGTTGA 2172 0.4774 MASRLKEDEKNERIIRGLLKLQENRRCINCGSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVSALQEGGNQRAKEIYFKEWDPQRHSLPDSSNIDRLRDFIKHVYVDRRYSGERNYDKPPRGKMGDKDDSYENRRVETYQGGSKSPPYEDAYERRYSDRSSPGGRSPGYDQESRQYGDYRKSPGRPPIINDWRREDRFGDVRRFEDRRTSDGDYKLEGQSPERAKDVDSSSSPVVRPVRDILGENVVPLRISEPPKTNSGKASDGSALTQRTASSSSLASSNGNAAEVKLETTKSLIDFDAEPEPPVAPAIPQAQQTTAVQPAVQPANSSDDNWASFDVAPAAKTTQGPSNLSPLESVLSQLSMPAPAPAPAPAPAPAPAPAPAAPQVSGVQGHLPASAVTASGAGAGTGTGTLGNFSSVPPSGTAVTAPGLMTVPPINNAGQWASVQHNRPVFPTTGSHPTTQQFIPSAGGSLNSQQWSVSPVPTMQGHPGIQMPHASPLTAKPTNEVSSSAALQPSKEVQPGGRKELPEDLFTARYSSFASPAPGWQMGPPQGMGIYMQYHTAAPMPSFPQSSKSTNPFDVSSEPPPVQAPTFPSMSSLQGALPSIPPSSGVIHPPSLGNPPLSWSSPQSSYGSVLPPQAQVHAAAMAPRAYVGQQVPTNMPMPRHQEIGNSGTHGAAFGFSNPDKQITGMFSTPAAANSFSAGGNPFG 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3299g00005 723 MobiDBLite consensus disorder prediction 582 597 - -
Pral3299g00005 723 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 135 - -
Pral3299g00005 723 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Pral3299g00005 723 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Pral3299g00005 723 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Pral3299g00005 723 MobiDBLite consensus disorder prediction 221 298 - -
Pral3299g00005 723 MobiDBLite consensus disorder prediction 582 649 - -
Pral3299g00005 723 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Pral3299g00005 723 MobiDBLite consensus disorder prediction 378 396 - -
Pral3299g00005 723 MobiDBLite consensus disorder prediction 268 298 - -
Pral3299g00005 723 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Pral3299g00005 723 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Pral3299g00005 723 PANTHER ARFGAP/RECO-RELATED 1 723 IPR044820 GO:0005096
Pral3299g00005 723 MobiDBLite consensus disorder prediction 124 147 - -
Pral3299g00005 723 MobiDBLite consensus disorder prediction 507 538 - -
Pral3299g00005 723 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Pral3299g00005 723 CDD ArfGap_AGFG 12 122 - -
Pral3299g00005 723 MobiDBLite consensus disorder prediction 221 236 - -
Pral3299g00005 723 MobiDBLite consensus disorder prediction 312 347 - -
Pral3299g00005 723 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Pral3299g00005 723 MobiDBLite consensus disorder prediction 124 205 - -
Pral3299g00005 723 MobiDBLite consensus disorder prediction 512 530 - -
Pral3299g00005 723 MobiDBLite consensus disorder prediction 375 404 - -
Pral3299g00005 723 MobiDBLite consensus disorder prediction 323 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3299g00005 Pral-Chr3299 16676 24378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3299g00005 12 122 C2H2 Transcription Factor Family AT4G21160 33.333 2.42e-12 67.0