Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3297g00008 ATGATAGGAAGCAGAAACCGGGGGGTGTTTAGTGTAGGTGTGTGTGGGCAAGAAGAGCTTGAACTGTCCAGAGATGGCAGCCATTACAGTCTATCTACCGGCATATTGCCTTCTCTTGGCGCTCGAAGCAACCGCCGAAACATCCTTCGACCTTTCATTATCTCCCCCTACGACCGCCGTTACAGAATATGGCAGACTTTTCTGGTGATTCTGGTTATATACACGGCATGGGTGTCGCCATTTGAGTTTGGATTCCTCAAGGAACCGATAAGATCACTCTCCATTGCAGACAACGTTGTCAACGGATTCTTTGCAATTGACATAGTTCTTACCTTCTTCGTTGCCTATCTTGACAAAACTTCCTACTTATTAGTGGATAGCCACAAAAGAATCGCCTGGAAATACGTTAGTTCTTGGTTTGCCTTTGATGTCATCTCCACGATCCCTTCAGAGCTCGCTCGAAAAATCTCCCCTTCCCCCCTTAAAACCTATGGATTCTTCAACATGCTTCGCCTCTGGCGTCTCCGAAGAGTCAGTGCTCTGTTTTCTAGATTGGAAAAGGACAAGAACTATAACTATTTCTGGGTTCGTTGTGCTAAGCTTATATGTGTCACGCTTTTTGCTGTTCACTGTGCTGGATGCTTCTATTATCTTCTTGCTGCTCGGTATCATGATCCCAAGAGGACGTGGATAGGAGCACAAATGGGGGATGATTTTGAGGAACAGAGCTTGTGGTTGAGATATGTGACTACTATATACTGGTCAATTACAACCTTAACAACTGTCGGCTATGGAGATTTGCATCCAGTAAATTCCAGAGAGATGACCTTCGACGTCTTTTATATGCTCTTTAACCTGGGATTAACTGCGTATTTGATTGGTAACATGACCAATCTGGTTGTCCATTTTACAAGTCGAACTAGACAATTTAGGGATACCATACAAGCTGCGGCAAGCTTTGCACAGAGGAATCGATTGCCTGTTCGGCTACAAGATCAGATGCTTGCACATTTGTGTTTGAAGTTCAGAACAGATTCAGAGGGGTTACAGCAGCAAGAGACACTTGATTCTCTTCCTAAAGCCATAAGATCAAGCATTTCTCATTATCTCTTCTATTCTGTGGTAGATAAGGTTTATTTATTTCGTGGGGTCTCAAATGACTTGCTTTTCCAACTGGTCTCGGAAATGAAAGCTGAGTATTTTCCACCCAAAGAAGATGTCATCTTGGAGAATGAAGCTCCCACAGATTTCTACATTCTAGCGACTGGTGCTGTGGAGCTGTTAGTTTTGAAAAATGGGGTAGAACAAGTGGTGGGAGAGGCAACCACTGGTCAACTCTGTGGTGAGATAGGGGTACTCTGTTACAGGCCACAACTCTTCACGGTTCGAACCAAGAGATTGAGCCAACTTCTTAGGCTGAACCGTGCCACCTTCCTCAACATTGTGCAGGCCAACGTTGGAGATGGCAACATAATCATCAACAATCTCCTTGAGCATTTGAAGGAACAGGAAGACCCAATGATGAAGAGTGTGTTGGTGGAGACAGAGAACATGCTGGCTCGTGGAAGGATGGACCTACCGCTTAGCCTCTGCTTCGCTGCTCTTAGAGGAGACGACTTGATGTTACATCAGTTGTTGAAACGAGGCTTGGATCCCAATGAATCTGACAACAACGGAAGAACTGCTCTCCATATTGCAGCATGTAAAGGAAGTGAGAACTGTGCCGTGCTTCTATTGGATTACGGGGCTGATCTCAACGTTAGAGATTGTGAAGGGAATGTACCACTATGGGAAGCAATACTGGGTCATCACCAATCAATGGTGAAGCTATTAGCAGAAAATGGAGCTTCCTTGAAATTCGGAGACGTGGGTCATTTCGCCTGCATTGCAGCAGAACAGAATGACCTTAACTTGCTCAAAGACATAGTCCGATATGGAGGAGATGTCACACTTCCTAGAAACCACAATGGAACCACAGCCCTCCACGTCGCAGTCTCTGAAGCCAACGTTGAGATTGTCAAGTTCCTGCTGGATCATGGGTCTGACGTAGACAAACCAGACAAGGAAGGGTGGACCCCAAGAGAGCTTGCAGACCAGCAAGGTCATGAAGAAATCAAAACCATTTTTGCATCCACAAAGGAACCCAAAGCTCAGTCTGTTGTATCCATGCCTGAGAGACACAGCACAAAGATCAGATACCTAGGAAGGTTCACTAGTGAGCCATCCATGCCTGTGGCTCCACAAGATGGCCCGCTTCGTGGCAATGATAGGTCGTACGGCGGGAGCAGGCCGAGGAGGAGGACGAATAATTTTCATAATTCTTTGTTTGGGATTATGTCCGCTGCTCACAAGGGGGACAACATGGAGGATTTGATGCTTGGTGTAAATAAGGAAAAATGTATGGGGAATGATGTTGATAATGGAGTTGGTGGAGGGTGTTTGGCTGCTAGGGTTACTATTACTTGTCCAGAAAATGGTGAGGTTGGAGGAAGACTTGTGCTGTTGCCTGAGAGCTTTAAGGATCTGATTGAGATTGGTGTTAAGAAATTTGGATTGAGCCATGATAACGTCAAGGTTCTGAACATAGATGGGGCTCAGATTGATGATATTGATGTTGTTAGAGATGGTGACCATCTGGTTTTTGCCTCTGCTGGTGGTCTTGTGCGCCAATCCAGTTGCCCGGAACCAACTCAAAACAATGTTTTGTGA 2709 0.4548 MIGSRNRGVFSVGVCGQEELELSRDGSHYSLSTGILPSLGARSNRRNILRPFIISPYDRRYRIWQTFLVILVIYTAWVSPFEFGFLKEPIRSLSIADNVVNGFFAIDIVLTFFVAYLDKTSYLLVDSHKRIAWKYVSSWFAFDVISTIPSELARKISPSPLKTYGFFNMLRLWRLRRVSALFSRLEKDKNYNYFWVRCAKLICVTLFAVHCAGCFYYLLAARYHDPKRTWIGAQMGDDFEEQSLWLRYVTTIYWSITTLTTVGYGDLHPVNSREMTFDVFYMLFNLGLTAYLIGNMTNLVVHFTSRTRQFRDTIQAAASFAQRNRLPVRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSVVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILENEAPTDFYILATGAVELLVLKNGVEQVVGEATTGQLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRATFLNIVQANVGDGNIIINNLLEHLKEQEDPMMKSVLVETENMLARGRMDLPLSLCFAALRGDDLMLHQLLKRGLDPNESDNNGRTALHIAACKGSENCAVLLLDYGADLNVRDCEGNVPLWEAILGHHQSMVKLLAENGASLKFGDVGHFACIAAEQNDLNLLKDIVRYGGDVTLPRNHNGTTALHVAVSEANVEIVKFLLDHGSDVDKPDKEGWTPRELADQQGHEEIKTIFASTKEPKAQSVVSMPERHSTKIRYLGRFTSEPSMPVAPQDGPLRGNDRSYGGSRPRRRTNNFHNSLFGIMSAAHKGDNMEDLMLGVNKEKCMGNDVDNGVGGGCLAARVTITCPENGEVGGRLVLLPESFKDLIEIGVKKFGLSHDNVKVLNIDGAQIDDIDVVRDGDHLVFASAGGLVRQSSCPEPTQNNVL 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3297g00008 902 FunFam Potassium channel SKOR 62 301 - -
Pral3297g00008 902 SUPERFAMILY cAMP-binding domain-like 305 500 IPR018490 -
Pral3297g00008 902 SUPERFAMILY Ankyrin repeat 529 711 IPR036770 -
Pral3297g00008 902 ProSiteProfiles Ankyrin repeat region circular profile. 656 688 - -
Pral3297g00008 902 Pfam KHA, dimerisation domain of potassium ion channel 817 881 IPR021789 -
Pral3297g00008 902 PANTHER POTASSIUM CHANNEL AKT1 27 882 IPR045319 GO:0005249|GO:0006813
Pral3297g00008 902 SUPERFAMILY Voltage-gated potassium channels 56 301 - -
Pral3297g00008 902 ProSiteProfiles Ankyrin repeat profile. 558 590 IPR002110 GO:0005515
Pral3297g00008 902 SMART ANK_2a 558 587 IPR002110 GO:0005515
Pral3297g00008 902 SMART ANK_2a 525 554 IPR002110 GO:0005515
Pral3297g00008 902 SMART ANK_2a 622 651 IPR002110 GO:0005515
Pral3297g00008 902 SMART ANK_2a 656 685 IPR002110 GO:0005515
Pral3297g00008 902 SMART ANK_2a 591 620 IPR002110 GO:0005515
Pral3297g00008 902 Pfam Cyclic nucleotide-binding domain 400 484 IPR000595 -
Pral3297g00008 902 MobiDBLite consensus disorder prediction 739 770 - -
Pral3297g00008 902 Gene3D Jelly Rolls 344 506 IPR014710 -
Pral3297g00008 902 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3297g00008 902 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3297g00008 902 PRINTS EAG/ELK/ERG potassium channel family signature 274 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3297g00008 902 PRINTS EAG/ELK/ERG potassium channel family signature 248 265 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3297g00008 902 PRINTS EAG/ELK/ERG potassium channel family signature 292 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3297g00008 902 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral3297g00008 902 ProSiteProfiles Ankyrin repeat region circular profile. 558 589 - -
Pral3297g00008 902 FunFam Potassium channel KAT2 368 504 - -
Pral3297g00008 902 ProSiteProfiles Ankyrin repeat profile. 656 688 IPR002110 GO:0005515
Pral3297g00008 902 Gene3D - 526 710 IPR036770 -
Pral3297g00008 902 ProSiteProfiles Ankyrin repeat profile. 591 623 IPR002110 GO:0005515
Pral3297g00008 902 ProSiteProfiles cAMP/cGMP binding motif profile. 380 499 IPR000595 -
Pral3297g00008 902 Pfam Ion transport protein 62 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral3297g00008 902 SMART cnmp_10 380 497 IPR000595 -
Pral3297g00008 902 ProSiteProfiles KHA domain profile. 817 899 IPR021789 -
Pral3297g00008 902 PRINTS Ankyrin repeat signature 672 686 IPR002110 GO:0005515
Pral3297g00008 902 PRINTS Ankyrin repeat signature 559 574 IPR002110 GO:0005515
Pral3297g00008 902 CDD CAP_ED 380 485 IPR000595 -
Pral3297g00008 902 Pfam Ankyrin repeats (3 copies) 629 707 IPR002110 GO:0005515
Pral3297g00008 902 Pfam Ankyrin repeats (3 copies) 530 619 IPR002110 GO:0005515
Pral3297g00008 902 Gene3D - 63 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3297g00008 Pral-Chr3297 438025 445310 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3297g00008 22 882 Ion Channels AT2G25600 63.322 0.0 1102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3297g00008 K21867 - qsa:O6P43_023045 1381.7