Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3297g00002 ATGGGGTCCTATGAACCATCAGCAGCCGGCGCCGCCTCCTCCAATGGTAGCTCCTCCAGCTCTGGAACCAAGCCGACGGAGATGGACGGCCTCCTAGCTGGGGGATACAAAGTCAAGTCGTCGGAGCTCCATCAAGTTGCTCGACGTCTCGAGCGGCTCGAGAATGTAATGGTCAACTCCGCGGCTGACATTTCTCAACTCGCTTCCGATACTGTACACTACGACCCCTCCGATATCGGCTCTTGGGTTGACACTCTGCTCACTGAATTGAACCAGACCGTTTCTCTGCCGTGTGATCTGTTGGAATTGCCGGATCTCCCAAATTATCCGTTGCTTGAAGAAACGACGGTCGATAATTGCTGGGTTGTGGCTCAGAATGATCAGAGCCCTCATAGCTTCACTCCTCAGCAGCAGCAATTTCAGCAATTGACGATGGTGACATCGATGGAAGAGAACTCCGGGATAAGGCTGGTCCACATGTTGATGACCTGTGCGGATTCTCTTCAACGTGGCGAGCTAGCTATTGCCGGCTCGCTTATCGAGGACATGCAGGGTTTGTTGGCGCATGTGAACACCAGCTGTGGCATAGGAAAAGTCGCCGGATGTTTCATCGACGCCCTGAGCCGCCGGATCTTCAAGCCACGGACCACCGGCACTGGTTCCTCCTGCACCGGCTCGCCTTATGAGGACGAGGTTTTGTACCATCACTATTACGAGGCTTGTCCTTACCTCAAGTTCGCTCACTTCACGGCTAATCAAGCCATCCTGGAAGCTTTCAACGGCCAGGATTACGTCCATGTCATCGACTTCAACCTCATGCACGGCCTCCAGTGGCCGGCCTTGATTCAAGCTTTGGCCCTCCGTTCCGGTGGGCCCCCCTTACTGAGGTTGACGGGCATTGGCCCGCCGTCTCCGGACGGCCGAGACAGTCTCCGTGAAATTGGTCTGCGACTCGCTGAGTTAGCTCGGCCAGCATGCTCTTGA 984 0.5549 MGSYEPSAAGAASSNGSSSSSGTKPTEMDGLLAGXGYKVKSSELHQVARRLERLENVMVNSAADISQLASDTVHYDPSDIGSWVDTLLTELNQTVSLPCDLLELPDLPNYPLLEETTVDNCWVVAQNDQSPHSFTPQQQQFQQLTMVTSMEENSGIRLVHMLMTCADSLQRGELAIAGSLIEDMQGLLAHVNTSCGIGKVAGCFIDALSRRIFKPRTTGTGSSCTGSPYEDEVLYHHYYEACPYLKFAHFTANQAILEAFNGQDYVHVIDFNLMHGLQWPALIQALALRSGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARPACS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3297g00002 328 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 145 324 IPR005202 -
Pral3297g00002 328 SMART DELLA_2 29 101 - -
Pral3297g00002 328 Pfam Transcriptional regulator DELLA protein N terminal 29 94 IPR021914 -
Pral3297g00002 328 MobiDBLite consensus disorder prediction 1 31 - -
Pral3297g00002 328 FunFam DELLA protein GAI 27 91 - -
Pral3297g00002 328 Pfam GRAS domain family 158 324 IPR005202 -
Pral3297g00002 328 Gene3D - 27 91 IPR038088 -
Pral3297g00002 328 Coils Coil 37 57 - -
Pral3297g00002 328 MobiDBLite consensus disorder prediction 8 26 - -
Pral3297g00002 328 ProSiteProfiles GRAS family profile. 149 328 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3297g00002 Pral-Chr3297 75747 76846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3297g00002 28 323 GRAS Transcription Factor Family AT1G14920 44.127 7.24e-76 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral3297g00002 GRAS 4.9e-46 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3297g00002 K14494 - qsa:O6P43_002319 433.335