Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral3291g00001 | ATGGCAATTCCTTCTGAGCGTAGCCTTGATTGCAAACCCCATCACAGCTTTTCCATGCTTCTGAAATCTTTTCGACACCATCACTGTACTGATCAGACTCCTCAGAACCTCACGCTCGAAGAATTCCTTTCTCGCCTCGAAGAAGAACGCCTCAAGATCGATGCCTTTAAGCGCGAGCTTCCTCTCTGCATGCAACTTCTCACCAACGCTATGGCGGAATCAAGGCAGAAACTTGAGGCTTTGAGTGGAAATGAAGGCAAGAAAAGTGCAGTTCTGGAAGAATTCATACCCTTAAAGCATTCATCATCAACTAGGGAAAGCCCTGATAAAGCAGCAAGCAACTGTGATAATAAAGCTAATTGGATGATATCTGCTCAGCTATGGAGCCAAGCTAGTGAAGAAACCAAGCCACAATATTCCACAATTGCATCGCCTAATAACTGCAATAAAGAAACTGATCATCGGATGGCCGGGTTCGATGTTGTTAGCCCTAATAAACTACACAGAAATATTAATGGAGGAGCCTTTCTTCCATTCTCAAATAATAAGGAACGAATTAGCTCGAATCAGTGCTCCTCATCGCCGCCATTGCAGACTCTTCCGGAGCTGGCACTTGCTTCTGCTGATGATCAGAAACAAATGGAAGATGAGAAATTATACTCAGAGACGATTGAGGATTCTTCTGGTAAAGGAGGAAGCAATAATTGTAGTGATCAAGGAAAAGGGATTACAGTTTCGTGTGAGGCGAAAACAAACAGTAAAACTGTTTTGACGACGTCCACCACGCAAAGTCATCGGAAAGCAAGAAGGTGTTGGTCGCCGGACTTGCACCGGAGATTTGTGAATGCTCTTCAGATGCTTGGTGGATCTCAAGTGGCCACCCCAAAACAGATTAGGGAGCTGATGAAGGTTGACGGATTGACCAATGATGAGGTTAAAAGTCATCTCCAGAAATATCGCCTCCACACAAGACGACCCGGTCCAAACCCGCAAGCAGGTGGGGCGGCAGCACCTCAGCTTGTAGTCCTAGGAGGAATATGGGTCCCACCCGCAACAGGAACCACTAACGCACTCTTTGGCTCGCACCCGGCCTATCATGCTCCCTCACCGCACCACTTCCCTCCCGCCAATCCGTCCCAAGACTCGTTGTTCACCAGGACGACAACACAATCACATAACCACGCTCTTCCCCACCAAGACCACCTCAATGGGTACAAAGCGACTTCGCAGAGCCAGAGATCTCCAGAATCAGAGAGCATAGAAGATGGGAAGTCAGAAAGTAGCAGCTGGAGGCAAGCAGAGAGTAATGAGAACAAAAGGGAAGACAATAAAAGTTGTGGTGCCATCAGCCTCAAATTGTAG | 1362 | 0.4728 | MAIPSERSLDCKPHHSFSMLLKSFRHHHCTDQTPQNLTLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMAESRQKLEALSGNEGKKSAVLEEFIPLKHSSSTRESPDKAASNCDNKANWMISAQLWSQASEETKPQYSTIASPNNCNKETDHRMAGFDVVSPNKLHRNINGGAFLPFSNNKERISSNQCSSSPPLQTLPELALASADDQKQMEDEKLYSETIEDSSGKGGSNNCSDQGKGITVSCEAKTNSKTVLTTSTTQSHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPGPNPQAGGAAAPQLVVLGGIWVPPATGTTNALFGSHPAYHAPSPHHFPPANPSQDSLFTRTTTQSHNHALPHQDHLNGYKATSQSQRSPESESIEDGKSESSSWRQAESNENKREDNKSCGAISLKL | 453 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral3291g00001 | 453 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 21 | 432 | IPR044787 | GO:0003700|GO:0006355 | |
Pral3291g00001 | 453 | SUPERFAMILY | Homeodomain-like | 265 | 325 | IPR009057 | - | |
Pral3291g00001 | 453 | MobiDBLite | consensus disorder prediction | 417 | 447 | - | - | |
Pral3291g00001 | 453 | MobiDBLite | consensus disorder prediction | 226 | 240 | - | - | |
Pral3291g00001 | 453 | Gene3D | - | 266 | 324 | - | - | |
Pral3291g00001 | 453 | MobiDBLite | consensus disorder prediction | 209 | 240 | - | - | |
Pral3291g00001 | 453 | Pfam | Myb-like DNA-binding domain | 269 | 320 | IPR001005 | - | |
Pral3291g00001 | 453 | Coils | Coil | 64 | 84 | - | - | |
Pral3291g00001 | 453 | MobiDBLite | consensus disorder prediction | 362 | 453 | - | - | |
Pral3291g00001 | 453 | MobiDBLite | consensus disorder prediction | 376 | 416 | - | - | |
Pral3291g00001 | 453 | Coils | Coil | 39 | 59 | - | - | |
Pral3291g00001 | 453 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 264 | 324 | IPR017930 | - | |
Pral3291g00001 | 453 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 267 | 322 | IPR006447 | GO:0003677 | |
Pral3291g00001 | 453 | MobiDBLite | consensus disorder prediction | 209 | 224 | - | - | |
Pral3291g00001 | 453 | FunFam | Myb family transcription factor | 266 | 324 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral3291g00001 | Pral-Chr3291 | 70855 | 74097 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral3291g00001 | 1 | 373 | G2-like Transcription Factor Family | AT2G03500 | 49.492 | 7.79e-101 | 306 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Pral3291g00001 | Myb_DNA-binding | 9.7e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral3291g00001 | - | - | pcin:129309792 | 504.212 |