Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3291g00001 ATGGCAATTCCTTCTGAGCGTAGCCTTGATTGCAAACCCCATCACAGCTTTTCCATGCTTCTGAAATCTTTTCGACACCATCACTGTACTGATCAGACTCCTCAGAACCTCACGCTCGAAGAATTCCTTTCTCGCCTCGAAGAAGAACGCCTCAAGATCGATGCCTTTAAGCGCGAGCTTCCTCTCTGCATGCAACTTCTCACCAACGCTATGGCGGAATCAAGGCAGAAACTTGAGGCTTTGAGTGGAAATGAAGGCAAGAAAAGTGCAGTTCTGGAAGAATTCATACCCTTAAAGCATTCATCATCAACTAGGGAAAGCCCTGATAAAGCAGCAAGCAACTGTGATAATAAAGCTAATTGGATGATATCTGCTCAGCTATGGAGCCAAGCTAGTGAAGAAACCAAGCCACAATATTCCACAATTGCATCGCCTAATAACTGCAATAAAGAAACTGATCATCGGATGGCCGGGTTCGATGTTGTTAGCCCTAATAAACTACACAGAAATATTAATGGAGGAGCCTTTCTTCCATTCTCAAATAATAAGGAACGAATTAGCTCGAATCAGTGCTCCTCATCGCCGCCATTGCAGACTCTTCCGGAGCTGGCACTTGCTTCTGCTGATGATCAGAAACAAATGGAAGATGAGAAATTATACTCAGAGACGATTGAGGATTCTTCTGGTAAAGGAGGAAGCAATAATTGTAGTGATCAAGGAAAAGGGATTACAGTTTCGTGTGAGGCGAAAACAAACAGTAAAACTGTTTTGACGACGTCCACCACGCAAAGTCATCGGAAAGCAAGAAGGTGTTGGTCGCCGGACTTGCACCGGAGATTTGTGAATGCTCTTCAGATGCTTGGTGGATCTCAAGTGGCCACCCCAAAACAGATTAGGGAGCTGATGAAGGTTGACGGATTGACCAATGATGAGGTTAAAAGTCATCTCCAGAAATATCGCCTCCACACAAGACGACCCGGTCCAAACCCGCAAGCAGGTGGGGCGGCAGCACCTCAGCTTGTAGTCCTAGGAGGAATATGGGTCCCACCCGCAACAGGAACCACTAACGCACTCTTTGGCTCGCACCCGGCCTATCATGCTCCCTCACCGCACCACTTCCCTCCCGCCAATCCGTCCCAAGACTCGTTGTTCACCAGGACGACAACACAATCACATAACCACGCTCTTCCCCACCAAGACCACCTCAATGGGTACAAAGCGACTTCGCAGAGCCAGAGATCTCCAGAATCAGAGAGCATAGAAGATGGGAAGTCAGAAAGTAGCAGCTGGAGGCAAGCAGAGAGTAATGAGAACAAAAGGGAAGACAATAAAAGTTGTGGTGCCATCAGCCTCAAATTGTAG 1362 0.4728 MAIPSERSLDCKPHHSFSMLLKSFRHHHCTDQTPQNLTLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMAESRQKLEALSGNEGKKSAVLEEFIPLKHSSSTRESPDKAASNCDNKANWMISAQLWSQASEETKPQYSTIASPNNCNKETDHRMAGFDVVSPNKLHRNINGGAFLPFSNNKERISSNQCSSSPPLQTLPELALASADDQKQMEDEKLYSETIEDSSGKGGSNNCSDQGKGITVSCEAKTNSKTVLTTSTTQSHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPGPNPQAGGAAAPQLVVLGGIWVPPATGTTNALFGSHPAYHAPSPHHFPPANPSQDSLFTRTTTQSHNHALPHQDHLNGYKATSQSQRSPESESIEDGKSESSSWRQAESNENKREDNKSCGAISLKL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3291g00001 453 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 21 432 IPR044787 GO:0003700|GO:0006355
Pral3291g00001 453 SUPERFAMILY Homeodomain-like 265 325 IPR009057 -
Pral3291g00001 453 MobiDBLite consensus disorder prediction 417 447 - -
Pral3291g00001 453 MobiDBLite consensus disorder prediction 226 240 - -
Pral3291g00001 453 Gene3D - 266 324 - -
Pral3291g00001 453 MobiDBLite consensus disorder prediction 209 240 - -
Pral3291g00001 453 Pfam Myb-like DNA-binding domain 269 320 IPR001005 -
Pral3291g00001 453 Coils Coil 64 84 - -
Pral3291g00001 453 MobiDBLite consensus disorder prediction 362 453 - -
Pral3291g00001 453 MobiDBLite consensus disorder prediction 376 416 - -
Pral3291g00001 453 Coils Coil 39 59 - -
Pral3291g00001 453 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 264 324 IPR017930 -
Pral3291g00001 453 NCBIfam myb-like DNA-binding domain, SHAQKYF class 267 322 IPR006447 GO:0003677
Pral3291g00001 453 MobiDBLite consensus disorder prediction 209 224 - -
Pral3291g00001 453 FunFam Myb family transcription factor 266 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3291g00001 Pral-Chr3291 70855 74097 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3291g00001 1 373 G2-like Transcription Factor Family AT2G03500 49.492 7.79e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral3291g00001 Myb_DNA-binding 9.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3291g00001 - - pcin:129309792 504.212