Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3287g00013 ATGGACGACGCGGGAATATCAGCAGTAGCAAAGCTTGCTGAATATTTGGTGGATCCTACTTTGCACCAATTGCAATATTTGTTTTGTGTTGGCAAAATCACTAGAAATGTTGAGACCAAAAGGGAGGAATTAATATTGAAGCAAGGGAGGGTGCAAGAACTTGTTGAAGAAGCCATTAAGAGGACTGAGAGGATCGATGATGAGGTTAACAAGTGGATGAATGAGGTGGTGAGCCTCATAGCAGAGGTGGAGAGCTTGGTGCAAGAACTGAATGCCAACAATAACTGCTTCCAAAGGTGGTGTCCTACTTGGAGGAGATATCATCTCTGCAAAGTGTTGGCGAAGACAGCCCAGCAGATGACAGAGTTGAATGCAAAGAGTGATCAGCTTGAACCATTTTCTCATTATGTTATTGTTCCAGATATAGAGTATCACTCTTCTAAAGATTTTATGCTCTTCAGATCAACAGAAATGGCATATGATGAGCTATGGGAGGCACTGCAAGATAATGATAGCTTTATTATTGGGTTGTGGGGCATGGGCGGTTCAGGCAAAACCACATTGGTCAAGGAAGTGGGAAAGAAATCCAAAGAATCAAAGCTGTTTGATCGAGTTATAATCACAACAATTTCCCAAACTCCAAATATAAGGAAGAGCCAAGGTGAAATTGCAGACTTGTTGGGACTCGAGCTGAGGGAAGAAAGTGAAGTAGGAAGGGCAAGAAGAATTGCAATGAAATTACAAAGTCCAAAGGAACAAATTCTAATTATATTGGATGATGTATGGGCTATGCTAAACCTTAAGGATATAGGGAATCCCTTTAGGAATGAAGGTCCAAGAAACTGCAAAGTTCTTCTTACCACGCGTCGTAAAGAGGTATGTACCTTGATGGATTGCCAAAAAACTATTTCATTGGGTCTACTAACAGAAGGTGAAGCTTGGGATCTATTTCAAACTCATGCTAAAGTAGATGATGGTGCAATAGAAGTGGCTCAAGAAGTTGCCATGGAATGTAAGGGACTACCCATTGCAATTGTGGCCATGGGGAAGTGCTTAAAAGCAAAAGGACTTGATGAGATAAATGTAGTATTGCATAGGTTGAGACATTCAAAGCCAGTTGTTGTGGATGAAGGAGGGAGCGATGCTTGTGCTTGTCTCAAGTTAAGCTATGATTATTTGAAAACTGTAGAAGCCAAATTGTTGTTCTTGATATGTGCTCTATTTCCTGAAGATCATGAAATCATCATTGAAGATCTTTTCAGGTATGGGATTGGGTTAGGCTTATGCAAAGATGCTGACTCATTGGAAATAGGAAGAAGTCAAGTTATAGCAGCTATAAATGTTCTCATTGACTCTTCATTGTTGACGTATTATGTCAACTCTTGGAATGAAAAATGTGTGAAAATGCATGACATGGTTCGTGATGTAGCTTTATGGATAGCACCTAAAGAGCATGGTACTATTATGGTCAACTGTGCTAAAGAATTTAATGGATTGCATGAAAATGAATCAGCAAAGGATTGCTATGCAATATCTTCATGGAATAGAAAGAATGAATTACTTCAATTTCCTTGTCAACTGGACGCTCCAAAGCTTGAGCTTATGTTGATAAATTCAAGCAAACCCATGGATTTATCACGTGCATCATTTGAAGGTGTTAAAGGACTAAAAGTTGTGGCTCTGAACAACAATGGACCGTTCTATTTGACAAAATTGCTTCCTCAATCAATACAATGGCTGTCCAATCTTCAAACTTTGCGCTTGCGAGATTGGGATTTAGGTGACATTTCTTTTGTGGTAAGCCTAAAAAGACTTGAAATTCTTGACCTGAAAGGAAGCAGATTCAAAAAAATGCCAAATGGAATTGAAAATCTAATCCATCTAAAATTGCTGGACTTGTCATGGTGTATAGCTGAAGAGTGTTTTTATAAAGCAATGGGAAGGTGTTCACAACTAGAAGAATTGTATGCTTATATAATACACCCTTCAAAATGCACAACTTGTTATGAATGCTTTGTGGGTGTCCCTGCTCTTTCAAAATTGGGAAGGTATACGTTGGAAATGGGGCCACACAACAAGACTATGTTCCAGAATAAAGGCATAAGAGAGATATTCTTTGCAGAGTTAAATATCTCCATCCCAAGTGCAATGATCAAGGATCTTGCACAAAGAGCAATTGCAATTGAATTTTATAAGCTTCAAGGAGGTTGCAGAAGGTTCAGTCCAGATGTGGTTCAAGCTGTAGGAGGCATGAATGAGTTAACTAAACTCTGTCTTCAACATTGTTCTGAGATCGAATGCTTTACTGATCAAACTATTCCTCATGAAGACATAGTTGTCCTTAGATTGGTTGAGCTGGTGTTGAAGCATATGGATAATCTAAAACAACTATGTTATGGCCCTTCAAATGCTAGCTTATTTCTAAATCTAGGAAGTCTAAACATAGAAAGTTGCCCTCAATTGCACAACGTGTTTCCTAGTAAATGCAATTTAGGCAACCTTAAGTACCTCAACATTGTCAACTGTCCGATGTTGACATCCCTCTTCCCTATCTCAGTTGCTTGTACTTTGCTATCGCTAGAACAACTCTCAATAAATGAATGTCATGAATTGAAGCATATAATTGAGGGAGAGGATGGTATTGTTGACGCAAGGGAGGATCCGATATTCCCAAAATGGGGAATTCTGTCTGTCTGGAATTGTAACCAATTAGAATCTATTTGCCCAAGCTTTTGTGTTCAAGGGTTTACACAATTAAAATCTATATTCATAAAAGATGCTCCTCAGTTGAAATTTGTATTTGGTGAAGCAACATCAATATGTGATGGAATAGAGACTAGCATAGTGCTTCCACTTTTAGAAAATTTCAGATTGGAAAACCTCCCAAATCTAGTCAGAATTTGTCCAGAGAGCTATCATCTATTGTGGCCATCTCTAATGAAAGCAGAATGGACAAGCTGTCCTAAGATAGAATACTTCATTTGA 2985 0.3866 MDDAGISAVAKLAEYLVDPTLHQLQYLFCVGKITRNVETKREELILKQGRVQELVEEAIKRTERIDDEVNKWMNEVVSLIAEVESLVQELNANNNCFQRWCPTWRRYHLCKVLAKTAQQMTELNAKSDQLEPFSHYVIVPDIEYHSSKDFMLFRSTEMAYDELWEALQDNDSFIIGLWGMGGSGKTTLVKEVGKKSKESKLFDRVIITTISQTPNIRKSQGEIADLLGLELREESEVGRARRIAMKLQSPKEQILIILDDVWAMLNLKDIGNPFRNEGPRNCKVLLTTRRKEVCTLMDCQKTISLGLLTEGEAWDLFQTHAKVDDGAIEVAQEVAMECKGLPIAIVAMGKCLKAKGLDEINVVLHRLRHSKPVVVDEGGSDACACLKLSYDYLKTVEAKLLFLICALFPEDHEIIIEDLFRYGIGLGLCKDADSLEIGRSQVIAAINVLIDSSLLTYYVNSWNEKCVKMHDMVRDVALWIAPKEHGTIMVNCAKEFNGLHENESAKDCYAISSWNRKNELLQFPCQLDAPKLELMLINSSKPMDLSRASFEGVKGLKVVALNNNGPFYLTKLLPQSIQWLSNLQTLRLRDWDLGDISFVVSLKRLEILDLKGSRFKKMPNGIENLIHLKLLDLSWCIAEECFYKAMGRCSQLEELYAYIIHPSKCTTCYECFVGVPALSKLGRYTLEMGPHNKTMFQNKGIREIFFAELNISIPSAMIKDLAQRAIAIEFYKLQGGCRRFSPDVVQAVGGMNELTKLCLQHCSEIECFTDQTIPHEDIVVLRLVELVLKHMDNLKQLCYGPSNASLFLNLGSLNIESCPQLHNVFPSKCNLGNLKYLNIVNCPMLTSLFPISVACTLLSLEQLSINECHELKHIIEGEDGIVDAREDPIFPKWGILSVWNCNQLESICPSFCVQGFTQLKSIFIKDAPQLKFVFGEATSICDGIETSIVLPLLENFRLENLPNLVRICPESYHLLWPSLMKAEWTSCPKIEYFI 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3287g00013 994 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 934 - -
Pral3287g00013 994 Gene3D Ribonuclease Inhibitor 504 981 IPR032675 -
Pral3287g00013 994 Gene3D - 390 478 IPR036388 -
Pral3287g00013 994 SUPERFAMILY L domain-like 468 931 - -
Pral3287g00013 994 PRINTS Disease resistance protein signature 174 189 - -
Pral3287g00013 994 PRINTS Disease resistance protein signature 600 616 - -
Pral3287g00013 994 PRINTS Disease resistance protein signature 248 262 - -
Pral3287g00013 994 PRINTS Disease resistance protein signature 338 352 - -
Pral3287g00013 994 Coils Coil 55 93 - -
Pral3287g00013 994 Pfam NB-ARC domain 159 373 IPR002182 GO:0043531
Pral3287g00013 994 Gene3D - 144 304 IPR027417 -
Pral3287g00013 994 Gene3D - 307 389 IPR042197 -
Pral3287g00013 994 FunFam Probable disease resistance protein At1g61300 144 302 - -
Pral3287g00013 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 405 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3287g00013 Pral-Chr3287 187888 190872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3287g00013 175 642 WRKY Transcription Factor Family AT5G45050 22.804 8.75e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3287g00013 - - pcin:129301500 1194.49