Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3287g00012 ATGGCTGAGGTCGGAGCGTCAGTAGCAGCAAAACTTGCTGAATATTTGGTGCATCCAACTTTACAACAGCTGCAGTATATGTTCTATGTTAGCAAGATCACCGGAAACGTTGAGATCAAAAAAAGGAAGCTAATACTAAAGCAGGGAAAGGTGCAAGAATGTGTTCAAGAGGCCATCAATAGGACTGAGAGGATTGATGGTGAGGTTACCAAGTGGAAGAATGACGTGAATAGCCTTATAGCAGAGGTGGAGAAACTGGAGGAAGAACTAAGGGCCAACAATGGTTGCCTTCAAGGGTGGTGTCCTACTTGGAGGAGATATTGTCTCTGCAAAATGTTGGCTAAGACAACTCAGAGGATGATTGATCTAGATATAAAGAGTGATCACTTCAATCCATTTTCCCATCCTGTTACTATTTCTGATATTGACTATCACTCTTCTCAAAATTTTAAGCTCTTCAATTCTACGCAAAAGGCTTTTGATCAATTGTGGGAGGCATTGCAAGATGATGGTAACTCCATGATTGGGTTATGGGGGATGGGAGGGTCAGGGAAAACCACCTTGGTGAAAGAAGTGGGAAAGAAAGCCAAAAAGTCACAGCTATTTGATCGAGTTGTGCTCACGACATTTTCTCAAAGCCTAGACATAAGAAAAATTCAAGGTGAAATTGCTGACACGTTGGGGCTTGAATTGAAGGAAGAAACTGAAATAGGCAGAGCGAAAAGAATAGCTCTACGATTACAAAGTGGAGAACGAATTTTGATAATACTAGATTACATATGGGCTATGCTGAACCTTGAGGACATAGGGATTCCCATTGAAAGAAATCATCAAAGAAGTTGCAAGGTTATCTTGACCACGCGTCGTCTAGATGTGTGTACCTTGATGGAATGCCAAAACAAGATTCAACTTCATTTGTTAAAAGAAGATGAAGCATGGACTTTGTTTCAAACTCATGCCAATGTTGATGAAGCTGCTAAGGAATGTGTGGCACGAGCAATTGCTAGGGAATGTAAAGGCCTACCTATTGCAATTGTAGCTGTAGGAAGTTGCTTGAAAGGCAAAGGAATTGATGAGATGAATATAGTGTTGTGTAGGTTGAGAAATGCAAAGCCAAACAATATAGATAAAGGTGTGAGGGATGCTTTTGCTTGTCTTGAATTAAGCTATGATTTTTTGGCAACTCTAGAAGCCCAGCGTTTATTGCTAATATGTGCTATGTTTCCTGAAGACCATGACATTGTTGTTGAAGACCTTTTTAGATATGGAGTGGGATTAGGCCTATGCAAAGATGCAGACTCATTTCAAACAGCGAGGAGCCAAGTTAGAGCAGCTATAAATGATCTCATTGACTCCTCATTGTTGATGCATTCTTCTCTAAAGTTCAACGTGCATGCACCAACACATGTGAAATTACATGATATGGTTCGTGATGTTGCATTGTGGATAGCATCTAAAAAAGATGGTAATATTATGGTAAATTGTACAAAAGAATTAAACGAGTTGATTGTTGACGAAGTGATAAAAGGTTGCTATGCCATATCTTCATGGCATGAAAATAATGAATTACTTCAATTTCCTTCTCAATTGGATGCCCCAAAACTTGAGTTTCTATTGTTACACTCAAGGGAAACCTTAGATATATCACATGAATTTTTTGAAGGTGCTAAAGGACTCAAGGCTTTGATTATTATGTGTGTGGATTGGGATAGGATTAAACTACAACCTTGTTTAATCCAACACTTGTCAAACCTTCGAACTTTGAGATTGCAAAATTGGGATTTACGTGACATCTCTTTTGTGGTAAGCCTTATAAGACTTGAAATTCTTGACTTGCAATTTAGTAAATTTGAAAGAGTACCGAATGGAATTGAAAAGTTGAAGAAGCTGAAGTTGTTAGATTTGTCAAGTTGTACAATAGATGAATGTTGTTATGATGTAATAGGAAAATGCTCACAGTTAGAAGAGTTGTATGTTCCCACACATTCTCGACACTCAAAAAATACAAATTGCTATGAATACCTTGTGGGCCACACTGGTTTGATGTATTTGAGAAGGTATAATTTAGAAATTAGGAAGCACGGCAGAGGCTTCGTATTTAAGGGTGAACATACAAGATCTTTACGCTTGGGTCAGTTAAATATCTCTATGTTGTTACCCACAATAATCAAGCATCTTGCACAAAGAGCAACCAAGATTGTATTTTATGAGCTTGAAGGAGGTAGCAAAAGTTTCATCCCTGGTATTGTCCAAGCTGTAGGAGGCATGAAGGAGTTGAGTAGACTCTGTCTTCAAAGATGTTCAAAGATTGAATGCATTATTGACGAAACTACTCTTCAAGAAGATGCAGTTGTCCCCAAATTGAATGAGTTAGTGCTAAGAGATATGGATAATCTTGAACGACTATGTCGTGCTCCTTCTCCTTTTAGCTTGTTCGAAAAGTTGGAAAGATTAACCATATTCAACTGTCCTCAGTTGCTCCACATATTCCCTGTCGACTGCAGCTTAGGCAATCTTAAGGTTCTCAATGTTAACAAGTGTCCAATTTTAACATCTCTCTTTCCTGTCTCTGCTGTTTGCACACTGCTATCCTTAGAAGAGCTCCGAATAAAATGTTGCAATGAATTGAAGCACGTATTAGATGAAGATGGTGGTGTTGATGCATGGGTGAGTTTGAGATTCTCAAAATTGAAAATTTTGTATGTTAGGAATTGCTGCAATTTAGAATCTGTGTGCCCGGTCTTCTTAGCTCAGAGATTTGTACAATTGCAAGATCTATCGGTAATAAATGCTCTACAGATGAAATCTTTGTTTAGTGAAAATGCTGGTGAAGAAGAACCAATGTTTGATCACGATGAGACTCAGATAGTTCTTCCTCTTTTAGAATATCTCAACCTGAAAAATCTTCCAAATCTTGTCCAAATTTGCTCAGAGAGGTATCATCCAAGGTGTCCATCTATAAAGACAATAGAATGGAAAGACTGCCCAAATATGGAATTGAAGGAACTTAAAGGCCATCAATTGTGGAATGAAGAATACAAGTCATTGGCAACTATAGAAAGGATTCGACTTGATAATTGTGGAGTAGAATCCATTTTAAACCACCAGACTGGGGTTGAAGGACAAATTCCAACATTTCAATACCTTAAAGAATTAACTCTGGAAAATTGCGCAAGATTAAAATTTGTCTTTTACGCTCATATCTTTCAAAGTCTCCCAGGGTTAATTTCTGTAAACATATCTTGTTGTGAGGAGTTGGAGGCAATTTTTTGGGGAAATGAAGAGACTGATAAGAATCCACCCGCCACTGAATCTTGTCTGCTGAAATTGAAGAGGGTGGAGATCTCTAAGTGCAACAAGCTTAAATTCCTTTGCATGCTCGGTGCTGCTACCTCAATGCTTCCACAACTAGACACTCTAATCATATCAGATTCTTATCAAATGGAACAAATTTTTAGATGCTCAAATATTGAAAATCAAGGCATTGACAGTGAAAAGGAGATTTTGCTCCCAAAAATGAAACTTATGAAACTTCAGAACTTGCCAAGGCTTGTTAATGTCTGCCAAGGGTTTAAGTTGCAAACATGGGAGTTTTGCACTGTTGAGGTTCATGACTGCCCAAGACTTGTGCCAATTATGAGTGCAATTATTGATTGGACTAAAGAGGGACTTGAAAGGAAGTATGTGTTGAAAGACAGCCAGTTAAATAATAATAAGGCTTTCAATCGTTCGCTTCCTATTCTATATGCTGGAGAACTTGATACTCAACGTCCTAGAGTTGAACACAAGTGGCGAGTGATTGGTGATGATGAGCGAGAAGAAACCAACGACTCAGAAATATTGAGGTCAAAACAACAAATGCTGGGAGGTCTTGTTCCCACAGAAGTTTTGAGCTTCCAATATCTTTGTTCCTTAGAAATAACTCACTGTAAAAAGCTGAAGTTCGTATTCTCAATGAGCACTATTGTCCACAACATCCTTCCCAAACTGACTTCGCTAGCCTTATTTGATTGTGAGGAACTAGAGGAAATAATTGCAGAAAATGAGGAACATCAGATCCTGTCCAACGTTCAAGTTGGCTTCCCAGAATTAAGATGGGTGGCTGTTAAGAGGTGCAATAAGCTCAAAAGACTCTTCTCTACGTCCATGGCTACCATCCTTCCACAACTAAACTCTTTGTTGATAACTGAGGCTGACCAATTAGAGGTGATTTTTGGACATAGTAGTGAAGATGATACCAACAACGGTGAGATTGTGCTTTCAAGCTTGGGGAAGGTAGAGCTAACAAATTTGCCAAATTTCATGACTGTTTGTCAAGGGTTGCAGATTCAGGCGCAGCTAAGCGACATATGGATACACAACTGCCCCAAATTTGTGGATTCAAGTTTGGGAAGGGCTCTTCAACAATTGGGAACAATATCGGTTTCAACAGAAGATTCAAATGTTCAAATTTCATCAAATGTAGAAGAACAATTGCCTGCAAGTGAGGAAAAAGGGATGATCTTGATCTCAAGAGCAGAGTACTTGCACATATGGGATTCAATTAGCCTCATATCTGTATGGGAGGGTCCCACTTTCATCATCTTCCAAAATCTGAAGGAGCTATACGTGAATGATTGTAGTAGATTGAAGTGTATATTCCCCAGCGCTGTGATAAGAAGCCTACCATGTTTGTCGCATCTAGACATTGATTACTGTGAAGAGTTGGAGGAGATAATGTCATCAGAGCATCACTTCCCAAATGCATATTCCTCTCATTCCTTCTGCTTCCCACAGCTTGAGACTCTTAGCGTCTTCGGATGCAGAAAGTTGAAATGGCTCTTCCCCTCTCTGCCTTCTGCCCAACATCTTCCACAGTTGAAATATCTGAGGATTAGCTGGTGCTCTGAACTAAAGGGACTTTTTAATGGTGAACTTGAAGTCCATGACGAGGAAGGCTCCAACAACAACATGCTTCCAATGCTGAGAGATCTTCAGGTAGACGATTGCCCAAACTTCTCCAAAACCACACTTGCTGCTCTTCAAAGTCAGCAGCAACAAAAAGAAGCGAAAGATGGTGATGATGATGATTGA 5073 0.3925 MAEVGASVAAKLAEYLVHPTLQQLQYMFYVSKITGNVEIKKRKLILKQGKVQECVQEAINRTERIDGEVTKWKNDVNSLIAEVEKLEEELRANNGCLQGWCPTWRRYCLCKMLAKTTQRMIDLDIKSDHFNPFSHPVTISDIDYHSSQNFKLFNSTQKAFDQLWEALQDDGNSMIGLWGMGGSGKTTLVKEVGKKAKKSQLFDRVVLTTFSQSLDIRKIQGEIADTLGLELKEETEIGRAKRIALRLQSGERILIILDYIWAMLNLEDIGIPIERNHQRSCKVILTTRRLDVCTLMECQNKIQLHLLKEDEAWTLFQTHANVDEAAKECVARAIARECKGLPIAIVAVGSCLKGKGIDEMNIVLCRLRNAKPNNIDKGVRDAFACLELSYDFLATLEAQRLLLICAMFPEDHDIVVEDLFRYGVGLGLCKDADSFQTARSQVRAAINDLIDSSLLMHSSLKFNVHAPTHVKLHDMVRDVALWIASKKDGNIMVNCTKELNELIVDEVIKGCYAISSWHENNELLQFPSQLDAPKLEFLLLHSRETLDISHEFFEGAKGLKALIIMCVDWDRIKLQPCLIQHLSNLRTLRLQNWDLRDISFVVSLIRLEILDLQFSKFERVPNGIEKLKKLKLLDLSSCTIDECCYDVIGKCSQLEELYVPTHSRHSKNTNCYEYLVGHTGLMYLRRYNLEIRKHGRGFVFKGEHTRSLRLGQLNISMLLPTIIKHLAQRATKIVFYELEGGSKSFIPGIVQAVGGMKELSRLCLQRCSKIECIIDETTLQEDAVVPKLNELVLRDMDNLERLCRAPSPFSLFEKLERLTIFNCPQLLHIFPVDCSLGNLKVLNVNKCPILTSLFPVSAVCTLLSLEELRIKCCNELKHVLDEDGGVDAWVSLRFSKLKILYVRNCCNLESVCPVFLAQRFVQLQDLSVINALQMKSLFSENAGEEEPMFDHDETQIVLPLLEYLNLKNLPNLVQICSERYHPRCPSIKTIEWKDCPNMELKELKGHQLWNEEYKSLATIERIRLDNCGVESILNHQTGVEGQIPTFQYLKELTLENCARLKFVFYAHIFQSLPGLISVNISCCEELEAIFWGNEETDKNPPATESCLLKLKRVEISKCNKLKFLCMLGAATSMLPQLDTLIISDSYQMEQIFRCSNIENQGIDSEKEILLPKMKLMKLQNLPRLVNVCQGFKLQTWEFCTVEVHDCPRLVPIMSAIIDWTKEGLERKYVLKDSQLNNNKAFNRSLPILYAGELDTQRPRVEHKWRVIGDDEREETNDSEILRSKQQMLGGLVPTEVLSFQYLCSLEITHCKKLKFVFSMSTIVHNILPKLTSLALFDCEELEEIIAENEEHQILSNVQVGFPELRWVAVKRCNKLKRLFSTSMATILPQLNSLLITEADQLEVIFGHSSEDDTNNGEIVLSSLGKVELTNLPNFMTVCQGLQIQAQLSDIWIHNCPKFVDSSLGRALQQLGTISVSTEDSNVQISSNVEEQLPASEEKGMILISRAEYLHIWDSISLISVWEGPTFIIFQNLKELYVNDCSRLKCIFPSAVIRSLPCLSHLDIDYCEELEEIMSSEHHFPNAYSSHSFCFPQLETLSVFGCRKLKWLFPSLPSAQHLPQLKYLRISWCSELKGLFNGELEVHDEEGSNNNMLPMLRDLQVDDCPNFSKTTLAALQSQQQQKEAKDGDDDD 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3287g00012 1690 SUPERFAMILY RNI-like 1523 1674 - -
Pral3287g00012 1690 Gene3D Ribonuclease Inhibitor 958 1168 IPR032675 -
Pral3287g00012 1690 Gene3D Ribonuclease Inhibitor 698 944 IPR032675 -
Pral3287g00012 1690 Gene3D Ribonuclease Inhibitor 1285 1410 IPR032675 -
Pral3287g00012 1690 Gene3D Ribonuclease Inhibitor 1480 1686 IPR032675 -
Pral3287g00012 1690 FunFam Probable disease resistance protein At1g61300 139 301 - -
Pral3287g00012 1690 PRINTS Disease resistance protein signature 174 189 - -
Pral3287g00012 1690 PRINTS Disease resistance protein signature 247 261 - -
Pral3287g00012 1690 PRINTS Disease resistance protein signature 338 352 - -
Pral3287g00012 1690 PRINTS Disease resistance protein signature 625 641 - -
Pral3287g00012 1690 Gene3D - 306 389 IPR042197 -
Pral3287g00012 1690 Pfam NB-ARC domain 157 391 IPR002182 GO:0043531
Pral3287g00012 1690 Coils Coil 69 93 - -
Pral3287g00012 1690 Gene3D - 390 481 IPR036388 -
Pral3287g00012 1690 Gene3D - 143 303 IPR027417 -
Pral3287g00012 1690 SUPERFAMILY RNI-like 961 1346 - -
Pral3287g00012 1690 Gene3D Ribonuclease Inhibitor 499 678 IPR032675 -
Pral3287g00012 1690 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 922 1152 - -
Pral3287g00012 1690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 403 IPR027417 -
Pral3287g00012 1690 SUPERFAMILY L domain-like 466 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3287g00012 Pral-Chr3287 155181 166363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3287g00012 175 635 WRKY Transcription Factor Family AT5G45050 23.701 6.58e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3287g00012 - - pcin:129317821 1625.91