Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3287g00006 ATGGCAGAGGTGGGAGTGTCGGTAGCAGCAAAACTTGCTGAGTATTTGTTGGATCCAACTTTACAGCGACTCCAATATTTGTTCTGTGTCGGCAAAATCACCAGAAATGTTGAGATCAGAAAGGAGGAACTGATACTGAAGCAAGGGAGGGTGCAAAAAGATGTTCAAGAGGCCATCAACAGGACCGAAAGGATATATGACGAGGTTAACATGTGGAAGAATGACGTGAAGACTCTCATAGCAGAGGTGGAGAAACTGGAGGAAGAACTAAGGGCCAACAATGGCTGCCTTCGAGGGTGGTGTCCTACTTGGAGGAGATATTGTCTCTGCAAAGAGTTGGCTAAGACAGCACAGAGGATAATTGATCTGAATACAAAGTGCGGTTGCTTCAATCAAGTTTCCCATCCTGTTATTGCCCCAAATATAGAATTTCACTCTTCTCAAAACTTTAAGTTCTTCAACTCTACACAAATGGCCTTTGATCAGCTGTGGGAGGCATTACGTGATGACGGTATCTCCATGATTGGGATATGGGGCATGGGAGGGTCAGGGAAAACCTCCTTGATGAGAGTAGTGGAAAAGAAAGCCGAGGAGTCACAGCTTTTTAATCAAGTTGTGCTCACTACAATTTCTCAAAGCCCAGATATAAGAAAAATTCAAGGCGAAATTGCTGATGCTTTGGGGCTCGAATTGAAGGAAGAATCTGAAACGGGAAGGGCAAAAAGAATAGCACTACGATTACATAGTGGAAAACGAATTTTGGTAATAATGGATGATGTATGGGCTATGTTGAATCTTGAGGACATAGGGATTTCCATGGGGGGAAACCATCAAAGAAGTTTCAAAGTTGTCCTAACCACACGCAGTCTTGATGTATGTATCTTAATGGAGTGCCAAAAGAGGATTCGACTTGATTTATTAAAAGAAGATGAAGCTTGGACTTTATTTCAAGCGCATGCTAATGTCAAAGATGCTACTAAAGGAGATATGGCGCGACAAATTGCTATGGAATGTAAGGGCCTACCCATTGCTATTGTAGCTGTGGGAACTTGCTTGAAAGAAAAAGGAGTCGATGAGATGAAGGTAATGTTGTATCAGCTAAGGAATAAGAAAGCAACCAATGTGAATAAAGGAGTAAGGGATGCTTTTACTTGTCTTAAACTAAGCTATGATAATTTGGCAACCCGAGAAGCCAAGTTGTTGTTGTTAATGTGTGCTATGTTTCCTGAAGATCATAATATTGGTGTTGAAGACCTTTTTAGATATGGAGTGGCTTTAGGCCTATGTGATGATGTAGACTCATTTGAAATAGCAAGGAGCCAAGTTAGAGCAATTATAAATTATCTCATTAACTCCTCATTGTTGATGCGTTCTTCAAAATTCAACACAAAGTCACAAGAATATGTGACCATGCATGATATGGTTCGTGATTTTGCATTGTGGAAAGCATCTGAAGAGGATCGTACCATTATGATAACTTGTACAAAAGAATTGAATGAATTGATGGCTGATGAAGCCATAAAAAATTGCTATGCCATATGTTCTTGGTATGTCAACAACAAATTTTCTTTTCAATTGGATGTTTCAAAAGTTGAGTTTCTATTGTTATGTTCAAGAGAACCCTTGGATATATCACATGCATCATTTGAAGGCACTAAAGGACTCAAGGCATTGATTATTACGTCCTCCATTTTTTTGCCCAAGATTGAACTATTAGGACCTCAATCAATCCAACACTTGTCTAATCTTCGAACTTTGCGATTGCAAGGTTGGTATTTACATGACATCTCTTTTGTGGTAAGCCTTACAAGACTTGAAATTCTTGACTTGCAACGAAGTACGTTTGAAAGAATGCCAAATGGAATTGAAAATTTAAACAAGCTGAAGTTGTTAGATTTGTCAGATTGTAACATACGTAAGTGTTGTTACAAAGTAATAGGAAGGTACTCACAGTTAGAAGAGTTGTATGTTTCCGGGCATTTTTCACAGTCAAAAAATGCAAATTGCTATGAATACTTTGTGGCCGCCACTGCTTTGATGAAATGGAGAAGGTATATGCTAGAAATTGGGAGGCATGAAACACGCTTGATATCTCCTAATGAAAGGACAAGATATTTACGCTTGGGTCAGTTAAACATCTCCATGCTAGGTGCAGGAATCAAGGATCTTGCACAAAGAGCAACTGAAATTGAATTTTATGAGCTTAAGGGAGGCAGCAGAAGTTTCATGCCTAATGTTGTTCAAGCTATTGAAGGTATGAATGAGTTATCTAAACTCTATCTTAGAAGATGTTCAGAGATGGAGTGCATTAATGACAAAATTAATGCTCAAGAAGATGTGATTGCCCCAACATTGGATGAGTTAGTGCTAAGAGATATGAATAATCTTCAACAACTACATCGTGGTCCTTCTTCTTTTAGCTTGTTTCAAAAGCTGGAAACATTAAGTATATCCAACTGCCCTCAGTTGCTCCTCATATTCCCTGCTGGTTGCAACTTCAGCAATCTTAAGTCTGTCAGTATTTCTAATTGTCCGAGGTTGACGTCTCTCTTCATTGTCTCTGTTGCGTGCACTCTGTTGTCCTTACAAGAGCTCCGAATAAAAAGTTGCAGTGAACTAAAGCATGTAATAAAAGAAGAGGGTGTTGGCAATGCATGGGAGAATTTGAGATTCCCAAAATTGAAAATTTTGTTTGTTGATAATTGCTGCAAATTAGAATCTGTATGGTCAGTCTTTTTAGCTCAAAGGTTTGTACAATTGCAGCGTCTATCCATAACAAATGCTCCTCAGATGAAATTTGTGTTCGGTGAAAATGTTGATGAAGAACAGCCATTGTGTGATCAAGATGAGGCTCAAATAGCTCTTTCTCTTTTGGATTACCTCACACTAACAAATCTTCCAAACCTTGTCAGAATTTGCCCGGAGAGTTATCATCTAAGGTGCCCATCTATAAAAACAATAGAATGGAAGGATTGTCCAAATCTGGAACTTAAAGGCCATCAATTGAGGAATGAAGAATGCAAGTCAGTGGCAGATATAGGACGTACTGAACTTCGTAACCGTGGAGTACAATCTATTTTCCTTTATAAGACTGGGGTTGGAGAACGAAGGACAACATTTAAATACCTTCAAGAATTAACTTTAAGAAATTGTAAAAGACTGAAATTTGTCTTTTCTGCTCATATTTGTCAAAGTCTTCCTGAGTTAACTTCTGTCACCATATCTTGTTGTGAGGAGTTGGAGGCAATTTTTCTGGGGAATGAAGAGACTCATAAGAATCTGCCCATAGCTGAATCTGATCTGCTAAAGTTGAAGAGTCTGGAGATCTCTAAGTGCAACAAGCTTAAATTCATTTTCATGATCAGTGCTGCTATCTCAATACTTCCTCAGCTAAGCACTCTAACCATATCAGATTCTTCTCAAATTGAAGAAATTTTCAAGTGCTCAGACATTGAAAATCATGACATTGACAGTGAAAAGGAGATTACATTCCCAAACATGAAACGTATGGAACTCGATAACTTGCCACGACTTGTTAATGTCTGTCAAGGGTTTAAGCTGCATACACGGGAGATTTTCAAGGTTCAGGTTCATCACTGCCTAAATTTCTTGCCAATTATAAGTGCAACTATTCATTGGACTGAAGAGGGACTTGTAAGGGAGTATGTGTTGAAATACAACCAGTTAAATAATAATAAGGCTCTCAACCTTCCGCTTTCTGTTCTGAATGCTGGAGAGCTTGATATTCGAAGTCCTGGAGTTGAACACAATTGGCGAGTGATTGGTGATGATGAGGAACAAGAAACCAACAACTCAGGAATGTTGAGATCAGAACAACAAATGCTGGGAGGTCTTGTTCCCACCCAGGTTTTGAGCTTTCAACATCTTCATTCCTTAGAAGTAACTCACAATAAAAGGTTGAAGTTTTTGTTCTCAAGCAGCACACTTGTCCACACCAGCCTTCCCAAATTGGCTTCCTTAATCTTATCTGATTGTGAAGAACTGGAGGAAATAATTGCAGAAAATGAGGAACATCATATCATGTCCAGTGCTGAAGTTCACTTCCCAAAACTTGGGGAGTTGAAGGTTGAGAGGTGCAACAAGCTCAAAAGACTCTTCTCTACGTCCACGAGTATTATTCTTCCACAACTATACTCTTTGTCAATAGCTGAGGCTAATCAACTGGAGGTGATTTTTAGACATAGCAGTGAAGGTGATGCGAACTACAGTGAGGCAATTGTGCTTTGCAGCTTGAGGACGATAGAGCTAACAAATTTGTCAAATTTGAAAAGTGTTTGTCAAGGATTGCAGATTCAGGTGAAGCTGAGCAGCATCAGCATATGGAACTGCCCAAAATTTGTGGATTCAACCTTGGGAAGGGCTCTTCAACAATTGGGAACAGTATCGGTTTCAAGGGAAGATTCAAATATTCAAACTTCATCAAATGGAGAAAAAGAATTGGTAGTAAATGAAGAAAAAGGGACGGTTGTGATCTCAGGAGCGGAGTACTTGTATTTGAAGGATTCAATGAATCTCATATCTGTATGGGAGGGTCCCGGTTTCATGGTCTTCCAAAATCTTAAGAGTTTATTTGTGAATAAATGTACAAAATTGAAGTGTATGTTCCCAAGCACTGTGATCAGAAGCCTACCGTGTTTGTGGTCTCTAAGCATTGAAGAATGTGAAGAGATGGAGGACATGATGTCATCAGAAGAAGAGCATCACTACTTTCCAAATACATCCTCCTCTCCTTCCTTCTGCTTCCCACAACTTCAATATCTTGAAGTCAGGAGATGCAGAAAGTTGAAATGGCTCTTCCCCTCTCTGCCCTCTACTCTCCATCTTCCACAGTTGGATTGTTTGTGGATTGATAAGTGCTCTGAACTAAAGGGACTTTTTAATTGCGAGCTCGAAATTCAAGAGAAGGGGTTTTACAACAACATATTTCCAAACCTGACATATCCATTTATCAGTGATTGCCCCATCTTCTCCAAAACCATACTCGCGGCTCTTCAAAGTCACGCAGCGAAAATACGAAGTCATCATGATCGTCGTGTCGATGATGATGGTGACGGTGACAGTGATGGCATATAA 5094 0.3946 MAEVGVSVAAKLAEYLLDPTLQRLQYLFCVGKITRNVEIRKEELILKQGRVQKDVQEAINRTERIYDEVNMWKNDVKTLIAEVEKLEEELRANNGCLRGWCPTWRRYCLCKELAKTAQRIIDLNTKCGCFNQVSHPVIAPNIEFHSSQNFKFFNSTQMAFDQLWEALRDDGISMIGIWGMGGSGKTSLMRVVEKKAEESQLFNQVVLTTISQSPDIRKIQGEIADALGLELKEESETGRAKRIALRLHSGKRILVIMDDVWAMLNLEDIGISMGGNHQRSFKVVLTTRSLDVCILMECQKRIRLDLLKEDEAWTLFQAHANVKDATKGDMARQIAMECKGLPIAIVAVGTCLKEKGVDEMKVMLYQLRNKKATNVNKGVRDAFTCLKLSYDNLATREAKLLLLMCAMFPEDHNIGVEDLFRYGVALGLCDDVDSFEIARSQVRAIINYLINSSLLMRSSKFNTKSQEYVTMHDMVRDFALWKASEEDRTIMITCTKELNELMADEAIKNCYAICSWYVNNKFSFQLDVSKVEFLLLCSREPLDISHASFEGTKGLKALIITSSIFLPKIELLGPQSIQHLSNLRTLRLQGWYLHDISFVVSLTRLEILDLQRSTFERMPNGIENLNKLKLLDLSDCNIRKCCYKVIGRYSQLEELYVSGHFSQSKNANCYEYFVAATALMKWRRYMLEIGRHETRLISPNERTRYLRLGQLNISMLGAGIKDLAQRATEIEFYELKGGSRSFMPNVVQAIEGMNELSKLYLRRCSEMECINDKINAQEDVIAPTLDELVLRDMNNLQQLHRGPSSFSLFQKLETLSISNCPQLLLIFPAGCNFSNLKSVSISNCPRLTSLFIVSVACTLLSLQELRIKSCSELKHVIKEEGVGNAWENLRFPKLKILFVDNCCKLESVWSVFLAQRFVQLQRLSITNAPQMKFVFGENVDEEQPLCDQDEAQIALSLLDYLTLTNLPNLVRICPESYHLRCPSIKTIEWKDCPNLELKGHQLRNEECKSVADIGRTELRNRGVQSIFLYKTGVGERRTTFKYLQELTLRNCKRLKFVFSAHICQSLPELTSVTISCCEELEAIFLGNEETHKNLPIAESDLLKLKSLEISKCNKLKFIFMISAAISILPQLSTLTISDSSQIEEIFKCSDIENHDIDSEKEITFPNMKRMELDNLPRLVNVCQGFKLHTREIFKVQVHHCLNFLPIISATIHWTEEGLVREYVLKYNQLNNNKALNLPLSVLNAGELDIRSPGVEHNWRVIGDDEEQETNNSGMLRSEQQMLGGLVPTQVLSFQHLHSLEVTHNKRLKFLFSSSTLVHTSLPKLASLILSDCEELEEIIAENEEHHIMSSAEVHFPKLGELKVERCNKLKRLFSTSTSIILPQLYSLSIAEANQLEVIFRHSSEGDANYSEAIVLCSLRTIELTNLSNLKSVCQGLQIQVKLSSISIWNCPKFVDSTLGRALQQLGTVSVSREDSNIQTSSNGEKELVVNEEKGTVVISGAEYLYLKDSMNLISVWEGPGFMVFQNLKSLFVNKCTKLKCMFPSTVIRSLPCLWSLSIEECEEMEDMMSSEEEHHYFPNTSSSPSFCFPQLQYLEVRRCRKLKWLFPSLPSTLHLPQLDCLWIDKCSELKGLFNCELEIQEKGFYNNIFPNLTYPFISDCPIFSKTILAALQSHAAKIRSHHDRRVDDDGDGDSDGI 1697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3287g00006 1697 Gene3D Ribonuclease Inhibitor 949 1203 IPR032675 -
Pral3287g00006 1697 Gene3D - 390 482 IPR036388 -
Pral3287g00006 1697 Gene3D - 306 389 IPR042197 -
Pral3287g00006 1697 Pfam NB-ARC domain 159 392 IPR002182 GO:0043531
Pral3287g00006 1697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 402 IPR027417 -
Pral3287g00006 1697 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1129 1399 - -
Pral3287g00006 1697 Gene3D Ribonuclease Inhibitor 1224 1403 IPR032675 -
Pral3287g00006 1697 Gene3D Ribonuclease Inhibitor 1498 1643 IPR032675 -
Pral3287g00006 1697 FunFam Probable disease resistance protein At1g63360 390 481 - -
Pral3287g00006 1697 Coils Coil 69 93 - -
Pral3287g00006 1697 SUPERFAMILY L domain-like 1035 1470 - -
Pral3287g00006 1697 SUPERFAMILY L domain-like 470 986 - -
Pral3287g00006 1697 SUPERFAMILY L domain-like 1505 1662 - -
Pral3287g00006 1697 FunFam Probable disease resistance protein At1g61300 143 301 - -
Pral3287g00006 1697 Gene3D Ribonuclease Inhibitor 735 943 IPR032675 -
Pral3287g00006 1697 PRINTS Disease resistance protein signature 174 189 - -
Pral3287g00006 1697 PRINTS Disease resistance protein signature 338 352 - -
Pral3287g00006 1697 PRINTS Disease resistance protein signature 623 639 - -
Pral3287g00006 1697 PRINTS Disease resistance protein signature 247 261 - -
Pral3287g00006 1697 Gene3D - 143 303 IPR027417 -
Pral3287g00006 1697 Gene3D Ribonuclease Inhibitor 510 679 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3287g00006 Pral-Chr3287 108989 119255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3287g00006 172 633 WRKY Transcription Factor Family AT5G45050 23.819 1.24e-07 55.1