Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3287g00004 ATGGCAGAGGTGGGAGTGTCGGTAGCAGCAAAACTTGCTGAGTATTTGTTGGATCCAACTTTACAGCGACTCCAATATTTGTTCTGTGTCGGCAAAATCACCAGAAATGTTGAGATCAGAAAGGAGGAACTGATACTGAAGCAAGGGAGGGTGCAAAAAGATGTTCAAGAGGCCATCAACAGGACCGAAAGGATATATGACGAGGTTAACATGTGGAAGAATGACGTGAAGACTCTCATAGCAGAGGTGGAGAAACTGGAGGAAGAACTAAGGGCCAACAATGGCTGCCTTCGAGGGTGGTGTCCTACTTGGAGGAGATATTGTCTCTGCAAAGAGTTGGCTAAGACAGCACAGAGGATAATTGATCTGAATACAAAGTGCGGTTGCTTCAATCAAGTTTCCCATCCTGTTATTGCCCCAAATATAGAATTTCACTCTTCTCAAAACTTTAAGTTCTTCAACTCTACACAAATGGCCTTTGATCAGCTGTGGGAGGCATTACGTGATGACGGTATCTCCATGATTGGGATATGGGGCATGGGAGGGTCAGGGAAAACCTCCTTGATGAGAGTAGTGGAAAAGAAAGCCGAGGAGTCACAGCTTTTTAATCAAGTTGTGCTCACTACAATTTCTCAAAGCCCAGATATAAGAAAAATTCAAGGCGAAATTGCTGATGCTTTGGGGCTCGAATTGAAGGAAGAATCTGAAACGGGAAGGGCAAAAAGAATAGCACTACGATTACATAGTGGAAAACGAATTTTGGTAATAATGGATGATGTATGGGCTATGTTGAATCTTGAGGACATAGGGATTTCCATGGGGGGAAACCATCAAAGAAGTTTCAAAGTTGTCCTAACCACACGCAGTCTTGATGTATGTATCTTAATGGAGTGCCAAAAGAGGATTCGACTTGATTTATTAAAAGAAGATGAAGCTTGGACTTTATTTCAAGCGCATGCTAATGTCAAAGATGCTACTAAAGGAGATATGGCGCGACAAATTGCTATGGAATGTAAGGGCCTACCCATTGCTATTGTAGCTGTGGGAACTTGCTTGAAAGAAAAAGGAGTCGATGAGATGAAGGTAATGTTGTATCAGCTAAGGAATAAGAAAGCAACCAATGTGAATAAAGGAGTAAGGGATGCTTTTACTTGTCTTAAACTAAGCTATGATAATTTGGCAACCCGAGAAGCCAAGTTGTTGTTGTTAATGTGTGCTATGTTTCCTGAAGATCATAATATTGGTGTTGAAGACCTTTTTAGATATGGAGTGGCTTTAGGCCTATGTGATGATGTAGACTCATTTGAAATAGCAAGGAGCCAAGTTAGAGCAATTATAAATTATCTCATTAACTCCTCATTGTTGATGCGTTCTTCAAAATTCAACACAAAGTCACAAGAATATGTGACCATGCATGATATGGTTCGTGATTTTGCATTGTGGAAAGCATCTGAAGAGGATCGTACCATTATGATAACTTGTACAAAAGAATTGAATGAATTGATGGCTGATGAAGCCATAAAAAATTGCTATGCCATATGTTCTTGGTATGTCAACAACAAATTTTCTTTTCAATTGGATGTTTCAAAAGTTGAGTTTCTATTGTTATGTTCAAGAGAACCCTTGGATATATCACATGCATCATTTGAAGGCACTAAAGGACTCAAGGCATTGATTATTACGTCCTCCATTTTTTTGCCCAAGATTGAACTATTAGGACCTCAATCAATCCAACACTTGTCTAATCTTCGAACTTTGCGATTGCAAGGTTGGTATTTACATGACATCTCTTTTGTGGTAAGCCTTACAAGACTTGAAATTCTTGACTTGCAACGAAGTACGTTTGAAAGAATGCCAAATGGAATTGAAAATTTAAACAAGCTGAAGTTGTTAGATTTGTCAGATTGTAACATACGTAAGTGTTGTTACAAAGTAATAGGAAGGTACTCACAGTTAGAAGAGTTGTATGTTTCCGGGCATTTTTCACAGTCAAAAAATGCAAATTGCTATGAATACTTTGTGGCCGCCACTGCTTTGATGAAATGGAGAAGGTATATGCTAGAAATTGGGAGGCATGAAACACGCTTGATATCTCCTAATGAAAGGACAAGATATTTACGCTTGGGTCAGTTAAACATCTCCATGCTAGGTGCAGGAATCAAGGATCTTGCACAAAGAGCAACTGAAATTGAATTTTATGAGCTTAAGGGAGGCAGCAGAAGTTTCATGCCTAATGTTGTTCAAGCTATTGAAGGTATGAATGAGTTATCTAAACTCTATCTTAGAAGATGTTCAGAGATGGAGTGCATTAATGACAAAATTAATGCTCAAGAAGATGTGATTGCCCCAACATTGGATGAGTTAGTGCTAAGAGATATGAATAATCTTCAACAACTACATCGTGGTCCTTCTTCTTTTAGCTTGTTTCAAAAGCTGGAAACATTAAGTATATCCAACTGCCCTCAGTTGCTCCTCATATTCCCTGCTGGTTGCAACTTCAGCAATCTTAAGTCTGTCAGTATTTCTAATTGTCCGAGGTTGACGTCTCTCTTCATTGTCTCTGTTGCGTGCACTCTGTTGTCCTTACAAGAGCTCCGAATAAAAAGTTGCAGTGAACTAAAGCATGTAATAAAAGAAGAGGGTGTTGGCAATGCATGGGAGAATTTGAGATTCCCAAAATTGAAAATTTTGTTTGTTGATAATTGCTGCAAATTAGAATCTGTATGGTCAGTCTTTTTAGCTCAAAGGTTTGTACAATTGCAGCGTCTATCCATAACAAATGCTCCTCAGATGAAATTTGTGTTCGGTGAAAATGTTGATGAAGAACAGCCATTGTGTGATCAAGATGAGGCTCAAATAGCTCTTTCTCTTTTGGATTACCTCACACTAACAAATCTTCCAAACCTTGTCAGAATTTGCCCGGAGAGTTATCATCTAAGGTGCCCATCTATAAAAACAATAGAATGGAAGGATTGTCCAAATCTGGAATTGCAGGAACTTAAAGGCCATCAATTGAGGAATGAAGAATGCAAGTCAGTGGCAGATATAGGACGTACTGAACTTCGTAACCGTGGAGTACAATCTATTTTCCTTTATAAGACTGGGGTTGGAGAACGAAGGACAACATTTAAATACCTTCAAGAATTAACTTTAAGAAATTGTAAAAGACTGAAATTTGTCTTTTCTGCTCATATTTGTCAAAGTCTTCCTGAGTTAACTTCTGTCACCATATCTTGTTGTGAGGAGTTGGAGGCAATTTTTCTGGGGAATGAAGAGACTCATAAGAATCTGCCCATAGCTGAATCTGATCTGCTAAAGTTGAAGAGTCTGGAGATCTCTAAGTGCAACAAGCTTAAATTCATTTTCATGATCAGTGCTGCTATCTCAATACTTCCTCAGCTAAGCACTCTAACCATATCAGATTCTTCTCAAATTGAAGAAATTTTCAAGTGCTCAGACATTGAAAATCATGACATTGACAGTGAAAAGGAGATTACATTCCCAAACATGAAACGTATGGAACTCGATAACTTGCCACGACTTGTTAATGTCTGTCAAGGGTTTAAGCTGCATACACGGGAGATTTTCAAGGTTCAGGTTCATCACTGCCTAAATTTCTTGCCAATTATAAGTGCAACTATTCATTGGACTGAAGAGGGACTTGTAAGGGAGTATGTGTTGAAATACAACCAGTTAAATAATAATAAGGCTCTCAACCTTCCGCTTTCTGTTCTGAATGCTGGAGAGCTTGATATTCGAAGTCCTGGAGTTGAACACAATTGGCGAGTGATTGGTGATGATGAGGAACAAGAAACCAACAACTCAGGAATGTTGAGATCAGAACAACAAATGCTGGGAGGTCTTGTTCCCACCCAGGTTTTGAGCTTTCAACATCTTCATTCCTTAGAAGTAACTCACAATAAAAGGTTGAAGTTTTTGTTCTCAAGCAGCACACTTGTCCACACCAGCCTTCCCAAATTGGCTTCCTTAATCTTATCTGATTGTGAAGAACTGGAGGAAATAATTGCAGAAAATGAGGAACATCATATCATGTCCAGTGCTGAAGTTCACTTCCCAAAACTTGGGGAGTTGAAGGTTGAGAGGTGCAACAAGCTCAAAAGACTCTTCTCTACGTCCACGAGTATTATTCTTCCACAACTATACTCTTTGTCAATAGCTGAGGCTAATCAACTGGAGGTGATTTTTAGACATAGCAGTGAAGGTGATGCGAACTACAGTGAGGCAATTGTGCTTTGCAGCTTGAGGACGATAGAGCTAACAAATTTGTCAAATTTGAAAAGTGTTTGTCAAGGATTGCAGATTCAGGTGAAGCTGAGCAGCATCAGCATATGGAACTGCCCAAAATTTGTGGATTCAACCTTGGGAAGGGCTCTTCAACAATTGGGAACAGTATCGGTTTCAAGGGAAGATTCAAATATTCAAACTTCATCAAATGGAGAAAAAGAATTGGTAGTAAATGAAGAAAAAGGGACGGTTGTGATCTCAGGAGCGGAGTACTTGTATTTGAAGGATTCAATGAATCTCATATCTGTATGGGAGGGTCCCGGTTTCATGGTCTTCCAAAATCTTAAGAGTTTATTTGTGAATAAATGTACAAAATTGAAGTGTATGTTCCCAAGCACTGTGATCAGAAGCCTACCGTGTTTGTGGTCTCTAAGCATTGAAGAATGTGAAGAGATGGAGGACATGATGTCATCAGAAGAAGAGCATCACTACTTTCCAAATACATCCTCCTCTCCTTCCTTCTGCTTCCCACAACTTCAATATCTTGAAGTCAGGAGATGCAGAAAGTTGAAATGGCTCTTCCCCTCTCTGCCCTCTACTCTCCATCTTCCACAGTTGGATTGTTTGTGGATTGATAAGTGCTCTGAACTAAAGGGACTTTTTAATTGCGAGCTCGAAATTCAAGAGAAGGGGTTTTACAACAACATATTTCCAAACCTGACATATCCATTTATCAGTGATTGCCCCATCTTCTCCAAAACCATACTCGCGGCTCTTCAAAGTCACGCAGCGAAAATACGAAGTCATCATGATCGTCGTGTCGATGATGATGGTGACGGTGACAGTGATGGCATATAA 5103 0.3947 MAEVGVSVAAKLAEYLLDPTLQRLQYLFCVGKITRNVEIRKEELILKQGRVQKDVQEAINRTERIYDEVNMWKNDVKTLIAEVEKLEEELRANNGCLRGWCPTWRRYCLCKELAKTAQRIIDLNTKCGCFNQVSHPVIAPNIEFHSSQNFKFFNSTQMAFDQLWEALRDDGISMIGIWGMGGSGKTSLMRVVEKKAEESQLFNQVVLTTISQSPDIRKIQGEIADALGLELKEESETGRAKRIALRLHSGKRILVIMDDVWAMLNLEDIGISMGGNHQRSFKVVLTTRSLDVCILMECQKRIRLDLLKEDEAWTLFQAHANVKDATKGDMARQIAMECKGLPIAIVAVGTCLKEKGVDEMKVMLYQLRNKKATNVNKGVRDAFTCLKLSYDNLATREAKLLLLMCAMFPEDHNIGVEDLFRYGVALGLCDDVDSFEIARSQVRAIINYLINSSLLMRSSKFNTKSQEYVTMHDMVRDFALWKASEEDRTIMITCTKELNELMADEAIKNCYAICSWYVNNKFSFQLDVSKVEFLLLCSREPLDISHASFEGTKGLKALIITSSIFLPKIELLGPQSIQHLSNLRTLRLQGWYLHDISFVVSLTRLEILDLQRSTFERMPNGIENLNKLKLLDLSDCNIRKCCYKVIGRYSQLEELYVSGHFSQSKNANCYEYFVAATALMKWRRYMLEIGRHETRLISPNERTRYLRLGQLNISMLGAGIKDLAQRATEIEFYELKGGSRSFMPNVVQAIEGMNELSKLYLRRCSEMECINDKINAQEDVIAPTLDELVLRDMNNLQQLHRGPSSFSLFQKLETLSISNCPQLLLIFPAGCNFSNLKSVSISNCPRLTSLFIVSVACTLLSLQELRIKSCSELKHVIKEEGVGNAWENLRFPKLKILFVDNCCKLESVWSVFLAQRFVQLQRLSITNAPQMKFVFGENVDEEQPLCDQDEAQIALSLLDYLTLTNLPNLVRICPESYHLRCPSIKTIEWKDCPNLELQELKGHQLRNEECKSVADIGRTELRNRGVQSIFLYKTGVGERRTTFKYLQELTLRNCKRLKFVFSAHICQSLPELTSVTISCCEELEAIFLGNEETHKNLPIAESDLLKLKSLEISKCNKLKFIFMISAAISILPQLSTLTISDSSQIEEIFKCSDIENHDIDSEKEITFPNMKRMELDNLPRLVNVCQGFKLHTREIFKVQVHHCLNFLPIISATIHWTEEGLVREYVLKYNQLNNNKALNLPLSVLNAGELDIRSPGVEHNWRVIGDDEEQETNNSGMLRSEQQMLGGLVPTQVLSFQHLHSLEVTHNKRLKFLFSSSTLVHTSLPKLASLILSDCEELEEIIAENEEHHIMSSAEVHFPKLGELKVERCNKLKRLFSTSTSIILPQLYSLSIAEANQLEVIFRHSSEGDANYSEAIVLCSLRTIELTNLSNLKSVCQGLQIQVKLSSISIWNCPKFVDSTLGRALQQLGTVSVSREDSNIQTSSNGEKELVVNEEKGTVVISGAEYLYLKDSMNLISVWEGPGFMVFQNLKSLFVNKCTKLKCMFPSTVIRSLPCLWSLSIEECEEMEDMMSSEEEHHYFPNTSSSPSFCFPQLQYLEVRRCRKLKWLFPSLPSTLHLPQLDCLWIDKCSELKGLFNCELEIQEKGFYNNIFPNLTYPFISDCPIFSKTILAALQSHAAKIRSHHDRRVDDDGDGDSDGI 1700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3287g00004 1700 Gene3D Ribonuclease Inhibitor 1227 1406 IPR032675 -
Pral3287g00004 1700 Gene3D Ribonuclease Inhibitor 1501 1646 IPR032675 -
Pral3287g00004 1700 Gene3D - 390 482 IPR036388 -
Pral3287g00004 1700 Gene3D - 306 389 IPR042197 -
Pral3287g00004 1700 Pfam NB-ARC domain 159 392 IPR002182 GO:0043531
Pral3287g00004 1700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 402 IPR027417 -
Pral3287g00004 1700 PRINTS Disease resistance protein signature 174 189 - -
Pral3287g00004 1700 PRINTS Disease resistance protein signature 338 352 - -
Pral3287g00004 1700 PRINTS Disease resistance protein signature 623 639 - -
Pral3287g00004 1700 PRINTS Disease resistance protein signature 247 261 - -
Pral3287g00004 1700 Gene3D Ribonuclease Inhibitor 704 933 IPR032675 -
Pral3287g00004 1700 Gene3D Ribonuclease Inhibitor 510 679 IPR032675 -
Pral3287g00004 1700 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1132 1402 - -
Pral3287g00004 1700 FunFam Probable disease resistance protein At1g63360 390 481 - -
Pral3287g00004 1700 Coils Coil 69 93 - -
Pral3287g00004 1700 SUPERFAMILY RNI-like 963 1179 - -
Pral3287g00004 1700 SUPERFAMILY RNI-like 1288 1675 - -
Pral3287g00004 1700 FunFam Probable disease resistance protein At1g61300 143 301 - -
Pral3287g00004 1700 SUPERFAMILY L domain-like 470 996 - -
Pral3287g00004 1700 Gene3D Ribonuclease Inhibitor 949 1206 IPR032675 -
Pral3287g00004 1700 Gene3D - 143 303 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3287g00004 Pral-Chr3287 108989 121851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3287g00004 172 633 WRKY Transcription Factor Family AT5G45050 23.819 1.37e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3287g00004 - - pcin:129317821 1563.51