Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3287g00003 ATGGCTGAGGTCGGAGCGTCAGTGGCGGCAAAACTTGCTGAATATTTGGTGCATCCAACTTTACAACAGCTGCAGTATATATTCTATGTTAGCAAAATCACCGGAAACGTTGACATCAAAAAAAGGAAGCTAATACTAAAGCATGGAAAGGTGCAAGAATGTGCTCAAGAGGCCATCAATAGGACTGAGAGGAATGATGGTGAGGTTAACAAGTGGAAGAATGACGTGAATAGCCTTATAGCAGGGGTGGAGAAACTGGCGGAAGAACTAAGGGCCAACAGTGGTTGCCTTCAAGGGTGGTGTCTTACTTGGAGGAGACATTGTCTCTGCAAAATGTTGGCTAAGACGACTCAGAGGATGATTGATCTAGATATAAAGAGTGATCACTTCAATCCATTTTCCCATCCTGTTACTATTTCTAATATTGACTATCACTCTTCTCAAAATTTTAAGCTCTTCAATTCTACGCAAAAGGCTTTTGATCCATTGTGGGAGGCATTGCAAGATGATGGTAACTCCATGATTGGATTATGGGGGATGGGAGGGTCAGGGAAAACCACCTTGGTGAAAGAAGTGGGAAACAAAGCCAAAAAGTCACAGCTATTTGATCGAGTTGTGCTCACGGCAGTTTCTCAAAGCCTAGACATAAGAAAAATTCAAGGTGAGATTGCTGACACGCTGGGGCTTGAATTGAAGGAAGAAACTGAAATGGGCAGGGCGAAAAGAATAGCTCTACGATTACAAAGTGGAGAACGAATTTTGATAATACTAGATGATATATGGGCTATGCTGAATCTTGAGGACATAGGGATTCCCATTGAAAGAAATCATCAAAGAAGTTGCACAGTTATCCTGACCACGCGTCGCCTAGATGTGTGTACCTTGATGGAATGCCAAAAAAAGATTCAACTTCATTTGTTAAAAGAAGATGAAGCATGGACTTTGTTTCAAACTCATGCTAATGTTGATGAAGCTGCTAAGGAATGTGTGGCACGAGCAATTTCTAGGGAATTTAAAGGCCTACCTATTGCAATTGTAGCTATAGGAAGTTGCTTGAAAGGAAAAGGAGTTGATGAGATGAATATAGTGTTGTGTAGGTTGAGAAATGCAAAGCCAAACAATATAGATAAAGGTGTGAGGGATGCTTTTGCTTGTCTTGAATTAAGCTATGATTTTTTGGCAACTCTAGAAGCCCAGCGGTTATTGCTAATATGTGCTATGTTTCCTGAAGACCATGACATTGTTGTTGAAGACCTTTTTAGATATGGAGTGGGATTAGGCCTATGCAAAGATGTAGACTCATTTCAAACAGTGAGGAGCCAAGTCAAAGCAGCTATAAATTATCTCATTGACTCCTCATTGTTGATGCATTCTTCTCTAAAGTTCAACGTGGATGCACCAACACATGTGAAATTACATGATATGGTTCGTGATGTTGCATTGTGA 1446 0.4066 MAEVGASVAAKLAEYLVHPTLQQLQYIFYVSKITGNVDIKKRKLILKHGKVQECAQEAINRTERNDGEVNKWKNDVNSLIAGVEKLAEELRANSGCLQGWCLTWRRHCLCKMLAKTTQRMIDLDIKSDHFNPFSHPVTISNIDYHSSQNFKLFNSTQKAFDPLWEALQDDGNSMIGLWGMGGSGKTTLVKEVGNKAKKSQLFDRVVLTAVSQSLDIRKIQGEIADTLGLELKEETEMGRAKRIALRLQSGERILIILDDIWAMLNLEDIGIPIERNHQRSCTVILTTRRLDVCTLMECQKKIQLHLLKEDEAWTLFQTHANVDEAAKECVARAISREFKGLPIAIVAIGSCLKGKGVDEMNIVLCRLRNAKPNNIDKGVRDAFACLELSYDFLATLEAQRLLLICAMFPEDHDIVVEDLFRYGVGLGLCKDVDSFQTVRSQVKAAINYLIDSSLLMHSSLKFNVDAPTHVKLHDMVRDVAL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3287g00003 481 Coils Coil 73 93 - -
Pral3287g00003 481 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 37 481 - -
Pral3287g00003 481 SMART AAA_5 171 308 IPR003593 GO:0016887
Pral3287g00003 481 FunFam Probable disease resistance protein At1g61300 138 301 - -
Pral3287g00003 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 403 IPR027417 -
Pral3287g00003 481 Gene3D - 306 389 IPR042197 -
Pral3287g00003 481 Gene3D - 390 481 IPR036388 -
Pral3287g00003 481 PRINTS Disease resistance protein signature 247 261 - -
Pral3287g00003 481 PRINTS Disease resistance protein signature 174 189 - -
Pral3287g00003 481 PRINTS Disease resistance protein signature 338 352 - -
Pral3287g00003 481 Pfam NB-ARC domain 158 391 IPR002182 GO:0043531
Pral3287g00003 481 Gene3D - 142 304 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3287g00003 Pral-Chr3287 95875 97320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3287g00003 175 480 WRKY Transcription Factor Family AT5G45050 25.316 1.58e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3287g00003 - - pcin:129317508 712.22