Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3287g00002 ATGGCAGAGGTGGGAGTGTCGGTGGCAGCAAAACTTGCTGAATATTTGGTGCATCCAACTTTACAGCAGCTGCAATATTTGTTCTGTGTGGACAAAATCACCAAAAATGTTGAGATCCGAAAGGAAGAGCTGATCCTGAAGCAAGGGAGGGTGCAGGAACGCGTTCAAGAGGCCATCAACAGGACTGAGAGGATTGATGATGAGGTTCACAGGTGGAAGAATGACGTGAAGAGCCTCATAGCAGAGGTGGAGAATTTGGAGGAAAGACTAAGGGCTAATCATGGCTGCCTTCGAGGGTGGTGTCCTACTTGGAGGAGATATTATATCTGCAAAAAGTTGGCTAAGACAATCCGGAGGATGATTGATCTAATTACGAACAGTAATCGCTTGGATCCATTTTCCCATCCCGTTATTCCTCCAAATATAGAATATCGCTCTTCTCAAAACTTCAAGTTCTTCAACTCTGCACAAATGGCTTTTGATCAGCTGTGGGAGGCATTGCACGATGATGGTAGCTCCATGATTGGGCTATGGGGAATGGGAGGGTCAGGGAAAACCTCCTTGATGAGACTTGTGGAAGAGAGAGCCGAGAAGTCACAGCTCTTTCGTCGAGTCGTGCTAACTACAATTTCTCAAAGCCCAGATATAAGAAAAATTCAAGGTGATATTGCTGATGCGTTGGGGCTCGAATTGAAGGAAGAATCTGTAACGGGAAGGGCAAAAAGAATAGCACAACGATTACGAAGTGGAGAACGAATTTTGATGATACTGGATGATCTATGGGATGTGCTGACTCTTGAGGACATAGGGATTCCTTTAGGGGAAAATCATCAAAGAAGTCTCAAAGTTGTCCTAACCACACGCATTCTTGATGTATGTAACAGGATGGAATGCCAAAAGAAGATTCGACTTGATTTGTTAAAAGAAGATGAAGCTTGGACATTGTTTCAAACTCATGCTAATTATGTCTATGATGTTGCCAAAGAAGATATGGCACGAGAAATTGCTATAGAATGTAAGGGCCTACCTATTGCAATTGTAGTTGTGGGTACTTGCTTGAAAGAAAAAGGAGTTGATGAGATCAAGGTGATGTTGTATCAGTTGAGGAACTCGAAGCCAAACATTGTGGATGAAGGAGTGAGTAAGGCTTTTACTTGTCTTGAATTAAGCTATGATTATTTGGCAACCCCAAAAGCCAAGTTATTGTTGTTAATGTGTGCTATGTTTCCTGAAGATCATAATATTGATGTTGAAGACCTTTTCAGATATGGAGTGGGTTTAGGTCTATGTGAAGATGTGGACTCATTTGAAACAGCGAGGAGCCAAGTTAGAGCAACTATAAATTATCTCATTGACTCCTCGTTGCTGATGCATTCTTCAAAATTCAACACCAAGTCACAAGAATATGTGACAATGCATGATATGGTTCGTGACTTTGCATTGTGGAAAGCATCTAAAGAGGATCGTACCATTATGGTAAATTGTACAAAAGAATTGAATGAATTGATGGCTGATGAAGCCATACAAAATTGCTATGCCATATCCTGTTGGTATGAGAACAACAAAATACTTAAATTTTCTTCTCAATTGGCTGCTTCAAAACTTGAGTTTCTAATGTTACATTCAAGAGAATCCTTGGATATGTCACATGCATCATTTGAAGGCACTAAAGGACTCAGGGCATTAATTATTTGCTCGCGTGATTGGATTAGGAGTGAACTGCAACTTCAATCAATCCAACACTTGTTTAATCTTCGAACTTTGCGATTGCAACAGCAGGATTTACATGACATCTCTGTTGTGGTAAGCCTTCCAAGACTTGAAATTCTTGACTTGAAATATTGTAGATTTGAAAGACTACCAAATGGAATTGAAAAATTAAACAAGTTGAAGTTGTTAGATTTGTCAGGTTGCATAATAGATGAATGTTGTTATGAAGTGATAGGAAGGTGCTCACGGTTAGAAGAGTTGTATGTTTCCTCACATTCTCCACATATAGAAAATGGAAATTGCTATGAATACCTTCTAGGCCCTTCTGCTTTGGTGAAATTGGAAAGGTATAGTTTGGAAGTTGGGAAGTATGGTGGGACCCGCTTGTTGCTTCATAATGAAAGCCAAAGATCTTTACGATTGGGTCAGTTAAATATCTCTATGTTAGGTGCAAGAATCAAAGACCTTGCACAAAGAGCAGCTGCGATTGAATTTTATGAGCTTAAGGGGGGCATCAAAAGTTTCATGGCTAATATTATCCGAGTTGTAGGAGGCATGAATGAGTTAACTGGACTTGCCCTTCGAAGATGTTCAGAGATTGAATGCATTGCCGACAAAATGGCTCCTCATGAAGATGCAGTTGTCCCCAGATTAGATGAGTTAAATTTAGAAGACATGGACAATCTTAAACAACTACATCATGGTCCTTCTCCTTTTGGATTATTCGAAAAGCTCAAAAGATTAAGTATCGTCAAATGCCCTCAATTGCTCCACATATTCCCTGCTGATTGCAACTTAGGCAATCTTAAGCTTCTCGAAATTATTAGCTGTTCGATGTTGACATGTCTCTTCCCCATCTCTGCCGCATGCACTCTGTTATCCATAGAGGAACTCCGCATAGGAGACTGCAGTGAATTGAAGCATGTCATAGAAGGAGAGGGTGGTGGTGATGCATGCGAGAATTTGAGCTTCCCAAAAATGAAAATTTTATCTGTTGATGATTGCTGCAAATTAGAATCTGTATGCCCAGCCTTTTTAGCTCAAAGGCTTGTAAAATTGCAGGACCTATCCATAAGAAATGCTCCTAAGATGAAATTTGTGTTTGGTGAAAATGCTGGTGAAGAACAACCAATGCATGATCAAGATGAGATTCAGTTAGTTCTCCCTCTTTTGTTACATCTCTTCATGGTAAATCTTCCAAATCTTGTCGGACTTTGCTCACAGAGGTATCATCCAAGGTTTCCATCTATAAAGGCTGTATATTGGGGGGATTGTCCAAATATGGAACTTGAGAGCCACCAGAGGAATGAAGAACACGAGTCGTTGGCAACTATAGAACGTATTCAACTTTATAACTGCGGAGTAGAATCCATTTCCCTCTATAAGACGCGCGTTGAAGAACAATATCCAACATTTCAATCCCTTAAAGAACTAGTCTTGTATAATCATGCAAGATTGAAATTTGTCTTTTCTGCTGACATGTGTCAAAGTCTTCTAGAGTTAACTTCTATAACCATATCTCGTTGTGAGGAGTTGGAGGCGATCTTTTCGGAGAATGAAGAGACTCAGAAAAATCCACCTAATGCTGAATCTTGTCTCCCGAAATTCAAGACGTTGGAAGTCTCTGAGTGCAACAAGCTTAAATTCATTTTATCTTTCATGATTGGTCCTACTGTCTCAATGCTGCCACAACTAAGCACTCTAGGCATATCAAATTCTTCCGAAATGGAAGAAATTTTCAAATGCCCAAATATTGAAGATCATCACATTGATAGCAGTGAAAAGGAGATTACATTCCCGAACATGAAATATCTGAAACTTGAGAACTTGCCAAGACTTGTTAATGTCTGCCAAGGATTCAAGTTGCAGACAGGGGAGTTTTGCACGGTTGCGGTTCATGACTGCCCAAAACTTATGCCAATTATGGGTGCATTTATTCATTGGACTAAAGAGGGGCTTGTAAGGGAGTATGTGTTGAGATACAACCAATTAAATAATAATGAGGCTCTCAATCATCCGCTTCCTGTTCTGAATGCCGGAGAGCTTGATATTCGAAGTCCTGGAGTTGAACACAACTGCCGAGTGATTGGTGATGATGAGGAGGAAGAAACCAACAACTCAGGAATGTTGAGATCAGAACAACAAATGCTGGGAGGTCTTGTTCCCACGCAAGTTTTGAGCTTTCAACATCTCCATTCCTTAGAAGTAACTCACGATAAAAAGTTGAAGTTTTTGTTCACAAGAAGCACTATTGTCCACACCAGCCTTCCCAAATTGGCTTCCCTAATCTTATCTGATTGTGAAGAACTAGAGGAAATAATTGCAGAAAGTGAGGAACATCAGATCATGTGCAGTGCTGAGGTTCACTTCCCAAAACTAAGAAAGTTGAAGGTTGAGAGGTGCAACAAGCTCAAAAGACTCTTCTCTACGTCCACGGGTATTATTCTTCCACAACTATACACTTTGTCAATAGCTGAGGCTAATCAACTGGAGGTGATTTTTAGACACAGCAGTGAAGGTGATGCGAATTCCAGTGAGGCAATTGTGCTTTCCAGCTTGAGGACGATAACGCTAACAAATTTGTCAAATTTGAAAAGTATCTGTCAAGGATTGCAGATTCAGGTGCAGCTGAGCAGCATCAGCATACGGAACTGCCCAAAATTTGTGGATTCAACGTTGGGAAGGGCTCTTCAACAATTGGGAACGACATCAGTATGA 4428 0.4047 MAEVGVSVAAKLAEYLVHPTLQQLQYLFCVDKITKNVEIRKEELILKQGRVQERVQEAINRTERIDDEVHRWKNDVKSLIAEVENLEERLRANHGCLRGWCPTWRRYYICKKLAKTIRRMIDLITNSNRLDPFSHPVIPPNIEYRSSQNFKFFNSAQMAFDQLWEALHDDGSSMIGLWGMGGSGKTSLMRLVEERAEKSQLFRRVVLTTISQSPDIRKIQGDIADALGLELKEESVTGRAKRIAQRLRSGERILMILDDLWDVLTLEDIGIPLGENHQRSLKVVLTTRILDVCNRMECQKKIRLDLLKEDEAWTLFQTHANYVYDVAKEDMAREIAIECKGLPIAIVVVGTCLKEKGVDEIKVMLYQLRNSKPNIVDEGVSKAFTCLELSYDYLATPKAKLLLLMCAMFPEDHNIDVEDLFRYGVGLGLCEDVDSFETARSQVRATINYLIDSSLLMHSSKFNTKSQEYVTMHDMVRDFALWKASKEDRTIMVNCTKELNELMADEAIQNCYAISCWYENNKILKFSSQLAASKLEFLMLHSRESLDMSHASFEGTKGLRALIICSRDWIRSELQLQSIQHLFNLRTLRLQQQDLHDISVVVSLPRLEILDLKYCRFERLPNGIEKLNKLKLLDLSGCIIDECCYEVIGRCSRLEELYVSSHSPHIENGNCYEYLLGPSALVKLERYSLEVGKYGGTRLLLHNESQRSLRLGQLNISMLGARIKDLAQRAAAIEFYELKGGIKSFMANIIRVVGGMNELTGLALRRCSEIECIADKMAPHEDAVVPRLDELNLEDMDNLKQLHHGPSPFGLFEKLKRLSIVKCPQLLHIFPADCNLGNLKLLEIISCSMLTCLFPISAACTLLSIEELRIGDCSELKHVIEGEGGGDACENLSFPKMKILSVDDCCKLESVCPAFLAQRLVKLQDLSIRNAPKMKFVFGENAGEEQPMHDQDEIQLVLPLLLHLFMVNLPNLVGLCSQRYHPRFPSIKAVYWGDCPNMELESHQRNEEHESLATIERIQLYNCGVESISLYKTRVEEQYPTFQSLKELVLYNHARLKFVFSADMCQSLLELTSITISRCEELEAIFSENEETQKNPPNAESCLPKFKTLEVSECNKLKFILSFMIGPTVSMLPQLSTLGISNSSEMEEIFKCPNIEDHHIDSSEKEITFPNMKYLKLENLPRLVNVCQGFKLQTGEFCTVAVHDCPKLMPIMGAFIHWTKEGLVREYVLRYNQLNNNEALNHPLPVLNAGELDIRSPGVEHNCRVIGDDEEEETNNSGMLRSEQQMLGGLVPTQVLSFQHLHSLEVTHDKKLKFLFTRSTIVHTSLPKLASLILSDCEELEEIIAESEEHQIMCSAEVHFPKLRKLKVERCNKLKRLFSTSTGIILPQLYTLSIAEANQLEVIFRHSSEGDANSSEAIVLSSLRTITLTNLSNLKSICQGLQIQVQLSSISIRNCPKFVDSTLGRALQQLGTTSV 1475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3287g00002 1475 PRINTS Disease resistance protein signature 339 353 - -
Pral3287g00002 1475 PRINTS Disease resistance protein signature 174 189 - -
Pral3287g00002 1475 PRINTS Disease resistance protein signature 625 641 - -
Pral3287g00002 1475 PRINTS Disease resistance protein signature 247 261 - -
Pral3287g00002 1475 Gene3D - 144 305 IPR027417 -
Pral3287g00002 1475 FunFam Probable disease resistance protein At1g61300 142 301 - -
Pral3287g00002 1475 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1133 1438 - -
Pral3287g00002 1475 FunFam Probable disease resistance protein At1g63360 391 482 - -
Pral3287g00002 1475 Pfam NB-ARC domain 160 392 IPR002182 GO:0043531
Pral3287g00002 1475 Gene3D - 391 483 IPR036388 -
Pral3287g00002 1475 Gene3D Ribonuclease Inhibitor 738 937 IPR032675 -
Pral3287g00002 1475 SUPERFAMILY L domain-like 471 1150 - -
Pral3287g00002 1475 Gene3D Ribonuclease Inhibitor 484 730 IPR032675 -
Pral3287g00002 1475 Gene3D Ribonuclease Inhibitor 958 1158 IPR032675 -
Pral3287g00002 1475 Gene3D Ribonuclease Inhibitor 1280 1409 IPR032675 -
Pral3287g00002 1475 Coils Coil 69 93 - -
Pral3287g00002 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 404 IPR027417 -
Pral3287g00002 1475 SUPERFAMILY RNI-like 1288 1460 - -
Pral3287g00002 1475 Gene3D - 306 390 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3287g00002 Pral-Chr3287 41060 46720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3287g00002 175 638 WRKY Transcription Factor Family AT5G45050 21.073 1.04e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3287g00002 - - pcin:129317821 1556.58