Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3285g00004 ATGGACAACACCTACTGTTCAAGGCCTGAAACATCTTATCTACGTCCAGTCTCTCGCCAGATCTGGTCATTGCAGGCCAATTCTATTCTTCTCACTCTTGAAAATCTACAACCCCAGACCGAAAGTGCAACTTCATCTGTCACAGAGGTGGGAGTGTCGGTGGCAGCAAAACTTGCTGAATATTTGGTGCATCCAACTTTACAGCAGCTGCAATATTTGTTCTGTGTGGGCAAAATCTCCAAAAATGTTGAGATCAGAAAGGAGGAGCTGATACTGAAGCAAGGGAGGGTGCAGGAACGCGTTCAAGAGGCCGTCAACAGGACTGAGAGGATTGATGATGAGGTTCACAGGTGGAAGAATGACGTGAAGAGCCTCATAGCAGAGGTGGAGAATTTGGAGGAAAGACTAAGGGCTAATCATGGGTGCCTTCGAGGGTTGTGTCCTACTTGGAGGAGATATTATCTCTGCAAAAAGTTGGCTAAGACAATCCGGAGGATGATTGATCTAATTACAAAGAGTAATCGCTTGGATCCATTTTCCCATCCCGTTATTGTTCCAGATATAGTGTATCACTCTTCACAAAACTTCAAGCTCTTCAACTCTACACAAATGGCTTTTGACCAGTTGTGGGAGGCTTTGCAAAATGAGGGTAGCTCCGTGATTGGACTTTGGGGAATGGGAGGGTCAGGGAAAACCACCTTGGTGACAGAAGTGGGAAAGAAAGCCAAAGAGTCACAACTCTTCGACAGAGTTGTGATTGCCACAATTTCTCAAAGTTTAGATATCATGCAAATTCAGGATGAAATTGCTGACTCGTTGGGGCTCAAGTTAGAAGAAAAATCTAAAACAGGAAGGGCAAAAAGAATTGCACTACGATTACAAGGCGGAAAACCGATTTTGGTAATACTGGATGATATATGGGCTAAGCTAAATCTTGAGCACATAGGGATTCCCATGGGGGGAAATCTTCAAAGGAGTTGCAAAGTTGTCCTGACCACACGCCTTTTAGAAGTATGTACCTTGATGGAATGTCAAAAGACAATCAAACTTGATTTGTTAAAAGAAGATGAAGCTTGGATTTTGTTTCAAAGTCATGCTAATGTCAATGATGCTGCTCAACAAGATATGGCACGACAAATCGCTATGGAATGTAAGGGCCTACCCATTGCGATTGTAGCTGTGGGTACTTGCTTGAAAGAAAAAGGAGTTGATGAGATGAAGGTAATGTTGCATCAGTTGAGGAATGCGAAAGCAACCAATGTGAATAAAGGAGTAAGGGATGCTTTTACTTGTCTTGAATTAAGCTATGATAATTTGGCAACCCGAGAAGCCAAGTTGTTATTGTTAATGTGTGCTATGTTTCCTGAAGATCATAATATTAGTGTTGAAGACCTTTTCAGATATGGAGTGGGTTTAGGCCTATGTGAAGATGTAGACTCATTTGAAATAGCAAGGTGCCAAGTTATAACAACTATCAATGATCTCATCAACTCCTCATTGTTGATGTGTTCTTCAAAATTCAACACAAATGCACAAGAATATGTGACAATGCATGATATGGTTCGTGATTTTGCATTGTGGAAAGCATCTAAAGAGGATCGTACCATTGGGGTAAGTTGTGGAAAGGAATTGAATGAAGTGATTGCTGATGAAGTGGTGAAAAATTGTTATGCTGTATCTTCATGGTATGAGAACAATAAACACTTTGAATTTCCTTCTCAATTGGATGTCTTTCAATTTCCTTCTCAATTGGATGCTCCAAAGCTTGAGTTTCTGTTGTTACAATCTGGAAAACTCTTGGATATCTCAGATGCATCATTTGAAGGAACTAAAGGACTGAAGGCGTTAATTATTAGCTCCTCCTATTTTGGGCAGCCCAATGCTAGACTATTACAACATCAATCAATCCAACACTTGTCTAATCTTCGAACTTTGCAATTGCAAGGTTGGAATTTACGTGACATCTCTTTTGTGGTAAGCCTTACAAGACTTGAAATTCTTGACTTGCAAAGAAGTATGTTTGAAAGATTGCCAAATGGAATTGAAAATTTAAATAAGCTGAAGTTGTTAGATTTGTCAGATTGTTACATAGGTGAATGTTGTTGCAAAGTAATAGGAAGATGCTCACAGTTAGAAGAGTTGTATGTTACCATGCATTGTCCACAGTCAAAAATTGCAAAATGCTATGAATGCCTTATGGCCCCTACTGCTTTGATTAAACTGAGAAGGTATAGGATAGGAATTGGGGAGCATAAATTGATGTCTCAAAAGGAAAGTGCAAGATATTTACGCTTGGTTCAGTTAAATATCGCCATGTTAGGTGTAGGAATCAAGGATCTTGCACAAAGAGCAACTACAATTAAATTTCATGAGCTTGAGGGAGGCAGCAGAAGTTTCATGCCTAATGTTGTTCAAGCTATCGGAGCCATGAATGAGTTAACTAAGCTCTGTCTTGGAAGGTGTTCAGAGATGGAATGCATTGTTGACAAAATTAATACTCATGAAGATGCGATTTCCCCAAGATTGGATGAGTTAGTGCTAAAAGATATGGATAATCTTCAACAACTACATCGTGGTCTTTCTTCTTTTAGCTTGTTCCAAAAGCTAGAAACACTACGTATATCCAATTGCCCTCAGTTGCTCCATATATTCCCTGCTGATTGCAACATAGGCAATCTTAAGTTTCTCAATATTTTTGGTTGTCCAAGGTTGACATCTCTCTTCCCTGTCTCTGCTGTGTGCACTCTGTTGTCCTTACAAGAGCTCCAAATAGAAAGGTGCAATGAACTGAAGCATGTAATAGAAGGAGAGGGTGGTGGTGATGCATTGGAAAGACTATGTATATCCAATTGCCCTCAGTTGCTCCATATATTCCCTGCTGATTGCAACATAGGCAATCTTAAGTTTCTCAATATTTTTGGTTGTCCGAGGTTGACATCTCTCTTCCCTGTCTCTGCTGTGTGCACTCTGCTGTCCTTACAAGAGCTCCAAATAGAAAGGTGCAATGAACTGAAGCATGTAATAGAAGGAGAGGGTGGTGGTGATGCATTGGAAAGACTATATATATCCAATTGCCCTCAGTTGCTCCATATATTCCCTGCTGATTGCAACTTAGGCAATCTTAAGTTTCTCAATATTTTTGGTTGTCCGAAGTTAACATCTCTCTTCCCTGTCTCTGTTGTGTGCACTCTATTGTCATTACGAGAGCTCCGAATACAAAGTTGCAGTGAACTGAAGCATGTTTTAGAGGGAGAGAGTGATGGTGATGCATGGGAGAATTTGAGCTTCCCAAAATTGAAAATTTTGTCTGTTGGTGATTGCTGCAAATTAGAATCTGTATGCTCAGTCTTTTTAGCTCAAAGGTTTGTACAATTGCAGCGTCTATCCATAACAAATGCTCCTCAAATGAAATTTGTGTTCGGTGAAAATGCTGATGAAGAACAACCACTGCGTGATCAAGATGAGACTCAAATAGCTCTTTCTCTTTTGGAATACCTCACACTAACAAGTCTTCCAAACCTTGTCGGAATTTGCTCAGAGAGGTATCATCTAAGGGGGCCATCTATAAAGACAATAGAATGGAAGGATTGTCCAAATCTGGAACTTGAGAGCCACCAGAGGAATGAAGAACACAAGTCATTGACAACTATAGAAAGTATTCAACTTCATAACTGTGGAGTAGAATCCATTTCCCTCTATAAGACAGGCGTTGAAGAACAATATCCAACATTTCAATCCCTTAAAGAACTAGCCTTGCGAAATCATGCAAGATTGAAATTTGTCTTTTCTGCTCACATGTGTCAAAGTCTTCCAGAGTTAACTTCTGTAACCATATCTTGCTGTGAGGAGTTGGAGGCGATCTTTTCGGAGAATGAAGAGACTCAGAAAAATCCACCTAATGCTGAATCTTGTCTCCCGAAATTGAAGACGTTGAGAGTCTCTGGGTGCAACAAGCTTAAATTCATTTTATCTTTCATGATTGGTCCTACTGTCTCAATGCTGCCACAACTAAGCACTCTAGCCATATCAAATTCTTCCGAAATGGAAGAAATTTTCAAATGCCCAAATATTGAAGATCATCACATTGATAGTAGTGAAAAGGAGATTACATTCCCGAACATGAAATATCTGGAACTTAAGAACTTGCCAAGACTTGTTAATGTCTGCCAAGGATTCAAGTTGCAGACAGGGGAGTTTTACATGGTTGCGGTTCATGACTGCCCAAAACTTATGCCAATTATGGGTGCATCTATTCATTGGACTAAAGAGGGACTTGTAAGGAAGTATGTGTTGAGATACAGCCAATTGGATAACAATGAGGCTCTCAATAATCTTCCACTTTCTGTTCTAAATATTGGAGAGCTTGATATTCAAAGTCCTAGAGTTGAACACGAGCGGCGAGTGATTGTTAATGATGAGCAAGAAGAAGCCAATAACTCAGAAATGTTGAGATCAGAAGAGCAAATGGTGGGAGGTCTTGTTCCCACGCAAGTGTTGAGCTTTCAACATCTTCATTCCTTAGAAGTAACTCACAATAAAAAGTTGAAGTTTTTGTTCTCAAGAAGCACTATTGTCCATACCAGCCTTCCCAAGCTAACTTCCCTAACCTTATCTGATTGTGAGGAATTAGAGGTGATTTTTAGACAAAGCAGTGAAGGTGATGCGAACTACAGTGAGACAATTGTGCTTTCCAGCTTGAGGACGATAGAGCTAACAAATTTGTCAAATTTGACAAGTGTTTGTCAAGGATTGCAGATTTAG 4761 0.3999 MDNTYCSRPETSYLRPVSRQIWSLQANSILLTLENLQPQTESATSSVTEVGVSVAAKLAEYLVHPTLQQLQYLFCVGKISKNVEIRKEELILKQGRVQERVQEAVNRTERIDDEVHRWKNDVKSLIAEVENLEERLRANHGCLRGLCPTWRRYYLCKKLAKTIRRMIDLITKSNRLDPFSHPVIVPDIVYHSSQNFKLFNSTQMAFDQLWEALQNEGSSVIGLWGMGGSGKTTLVTEVGKKAKESQLFDRVVIATISQSLDIMQIQDEIADSLGLKLEEKSKTGRAKRIALRLQGGKPILVILDDIWAKLNLEHIGIPMGGNLQRSCKVVLTTRLLEVCTLMECQKTIKLDLLKEDEAWILFQSHANVNDAAQQDMARQIAMECKGLPIAIVAVGTCLKEKGVDEMKVMLHQLRNAKATNVNKGVRDAFTCLELSYDNLATREAKLLLLMCAMFPEDHNISVEDLFRYGVGLGLCEDVDSFEIARCQVITTINDLINSSLLMCSSKFNTNAQEYVTMHDMVRDFALWKASKEDRTIGVSCGKELNEVIADEVVKNCYAVSSWYENNKHFEFPSQLDVFQFPSQLDAPKLEFLLLQSGKLLDISDASFEGTKGLKALIISSSYFGQPNARLLQHQSIQHLSNLRTLQLQGWNLRDISFVVSLTRLEILDLQRSMFERLPNGIENLNKLKLLDLSDCYIGECCCKVIGRCSQLEELYVTMHCPQSKIAKCYECLMAPTALIKLRRYRIGIGEHKLMSQKESARYLRLVQLNIAMLGVGIKDLAQRATTIKFHELEGGSRSFMPNVVQAIGAMNELTKLCLGRCSEMECIVDKINTHEDAISPRLDELVLKDMDNLQQLHRGLSSFSLFQKLETLRISNCPQLLHIFPADCNIGNLKFLNIFGCPRLTSLFPVSAVCTLLSLQELQIERCNELKHVIEGEGGGDALERLCISNCPQLLHIFPADCNIGNLKFLNIFGCPRLTSLFPVSAVCTLLSLQELQIERCNELKHVIEGEGGGDALERLYISNCPQLLHIFPADCNLGNLKFLNIFGCPKLTSLFPVSVVCTLLSLRELRIQSCSELKHVLEGESDGDAWENLSFPKLKILSVGDCCKLESVCSVFLAQRFVQLQRLSITNAPQMKFVFGENADEEQPLRDQDETQIALSLLEYLTLTSLPNLVGICSERYHLRGPSIKTIEWKDCPNLELESHQRNEEHKSLTTIESIQLHNCGVESISLYKTGVEEQYPTFQSLKELALRNHARLKFVFSAHMCQSLPELTSVTISCCEELEAIFSENEETQKNPPNAESCLPKLKTLRVSGCNKLKFILSFMIGPTVSMLPQLSTLAISNSSEMEEIFKCPNIEDHHIDSSEKEITFPNMKYLELKNLPRLVNVCQGFKLQTGEFYMVAVHDCPKLMPIMGASIHWTKEGLVRKYVLRYSQLDNNEALNNLPLSVLNIGELDIQSPRVEHERRVIVNDEQEEANNSEMLRSEEQMVGGLVPTQVLSFQHLHSLEVTHNKKLKFLFSRSTIVHTSLPKLTSLTLSDCEELEVIFRQSSEGDANYSETIVLSSLRTIELTNLSNLTSVCQGLQI 1586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3285g00004 1586 PRINTS Disease resistance protein signature 682 698 - -
Pral3285g00004 1586 PRINTS Disease resistance protein signature 293 307 - -
Pral3285g00004 1586 PRINTS Disease resistance protein signature 384 398 - -
Pral3285g00004 1586 PRINTS Disease resistance protein signature 220 235 - -
Pral3285g00004 1586 SUPERFAMILY L domain-like 516 928 - -
Pral3285g00004 1586 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1124 1352 - -
Pral3285g00004 1586 Pfam NB-ARC domain 205 438 IPR002182 GO:0043531
Pral3285g00004 1586 Gene3D - 436 528 IPR036388 -
Pral3285g00004 1586 Coils Coil 115 139 - -
Pral3285g00004 1586 Gene3D - 352 435 IPR042197 -
Pral3285g00004 1586 FunFam Probable disease resistance protein At1g63360 436 527 - -
Pral3285g00004 1586 FunFam Probable disease resistance protein At1g61300 191 347 - -
Pral3285g00004 1586 SUPERFAMILY RNI-like 1163 1385 - -
Pral3285g00004 1586 SUPERFAMILY L domain-like 858 1135 - -
Pral3285g00004 1586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 448 IPR027417 -
Pral3285g00004 1586 Gene3D Ribonuclease Inhibitor 552 740 IPR032675 -
Pral3285g00004 1586 Gene3D Ribonuclease Inhibitor 760 963 IPR032675 -
Pral3285g00004 1586 Gene3D - 191 351 IPR027417 -
Pral3285g00004 1586 Gene3D Ribonuclease Inhibitor 964 1057 IPR032675 -
Pral3285g00004 1586 Gene3D Ribonuclease Inhibitor 1150 1368 IPR032675 -
Pral3285g00004 1586 Gene3D Ribonuclease Inhibitor 1058 1142 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3285g00004 Pral-Chr3285 73113 79621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3285g00004 221 692 WRKY Transcription Factor Family AT5G45050 22.774 7.23e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3285g00004 - - pcin:129317821 1273.84