Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3285g00003 ATGGCAGAGGTGGGAGTGTCGGTGGCAGCAAAACTTGCTGAATATTTGGTGCATCCAACTTTACAGCAGCTGCAATATTTGTTCTGTGTGGGCAAAATCACCAAAAATGTTGAGATCAGAAAGGAAGAGCTGATCCTGAAGCAAGGGAGGGTGCAGGAACGCGTTCAAGAGGCCGTCAACAGGACTGAGAGGATTGATGATGAGGTTCACAGGTGGAAGAATGACGTGAAGAGCCTCATAGAAGAGGTGGAGAATTTGGAGGAAAGACTAAGGGCTAATCATGGTTGCCTTCGAGGGTTGTGTCCTACTTGGAGGAGATATTATCTCTGCAAAAAGTTGGCTAAGACAATCCGGAGGATGATTGATCTAATTACAAAGAGTAATCGCTTGGATCCATTTTCCCATCCCGTTATTGTTCCAGATATAGTGTATCACTCTTCACAAAACTTCAAGCTCTTCAACTCTACACAAATGGCTTTTGACCAGTTGTGGGAGGCTTTGCAAAATGAGGGTAGCTCCGTGATTGGACTTTGGGGGATGGGAGGGTCAGGGAAAACTACCTTGGTGACAGAAGTGGGAAAGAAAGCCAAAGAGTCACAACTCTTCGATAGAGTTGTGATTGCCACAATTTCTCAAAGTTTAGATATCATGCAAATTCAGGATGAAATTGCTGACTCGTTGGGGCTCAAGTTAGAAGAAAAATCTAAAACAGGAAGGGCAAAAAGAATTGCACTACGATTACAAGGCGGAAAACCGATTTTGGTAATACTGGATGATATATGGGCTAAGCTAAATCTTGAGCACATAGGGATTCCCATGGGGGGAAATCCTCAAAGAAGTTGCAAAGTTGTCCTGACCACACGCCTTTTAGAAGTGTGTACCTTGATGGAATGTCAAAAGACAATCAAACTTGATTTGTTAAAAGAAGATGAAGCTTGGATTTTGTTTCAAAGTCATGCTAATGTCAATGATGCTGCTCAACAGGATATGGCACGACAAATCGCTATGGAATGTAAGGGCCTACCCATTGCGATTGTAGCTGTGGGTACTTGCTTGAAAGAAAAAGGAGTTGATGAGATGAAGGTAATGTTGTATCAGTTGAGGAATGCGAAAGCAACCAATGTGAATAAAGGAGTAAGGGATGCTTTTACTTGTCTTGAATTAAGCTATGATAATTTGGCAACCCGAGAAGCCAAGTTGTTATTGTTAATGTGTGCTATGTTTACTGAAGATCGTAATATTAGTGTTGAAGACCTTTTCAGATATGGAGTGGGTTTAGGCCTATGTGAAGATGTAGACTCATTTGAAATAGCAAGGAGCCAAGTTAGAACAACTATAAATGATCTCATCAACTCCTCATTGTTGATGTATTCTTCAAAATTCAACACAAATGCACAAGAATATGTGACAATGCATGATATGGTTCGTGATTTTGCATTGTGGAAAGCATCTAAAGAGGATCGTACCATTGGGGTAAATTGTGGAAAGGAATTGAATGAATTGATTGCTGATGAAGTGGTGAAAAATTGTTATGCTGTATCTTCATGGTATGAGAACAATAAACTCTTTCAACTTCCTTCTCAATTGGATGTCTTTCAATTTCCTTCTCAATTGGATGCTCCAAAGCTTGAGTTTCTGTTGTTACAATCTGGAAAACTCTTGGATATCTCACATGCATCATTTGAAGGAACTAAAGGACTGAAGGTGTTAATTATTAGGTCCTTCTGTTTTGGGCACCTCAAAGCTAAACTATTACAACCTCAATCAATCCAACACTTGTCTAATCTTCGAACTTTGCGATTGCAAGGTTGGAATTTACGTGACATCTCTTTTGTGGTAAGCCTTACAAGACTTGAAATTCTTGACTTGCAAACAAGTATGTTTGAAAGATTGCCAAATGGAATTGAAAATTTAAACAAGCTGAAGTTGTTAGATTTGTCAGATTGTTACATAGGTGAATGTTGTTGCAAAGTAATAGGAAGATGCTCACAGTTAGAAGAGTTGTATGTTACCATGCATTGTCCACAGTCAAAAATTGCAAAATGCTATGAATGCCTTATGGCCCCTACTGCTTTGATTAAACTGAGAAGGCATAGGATAGAAATTGGGGAGCATAAATTTTTGTATCAAAGGGAAAGTGCAAGATATTTACGCTTGGTTCAGTTAAATATCGCCATGTTAGGTGTAGGAATCAAGGATCTTGCACAAAGAGCAACTACAATTGAATTTCATGAGCTTGAGGGAGGCAGCAGAAGTTTCATGCCTAATGTTGTTCAAGCTATTGGAGCCATGAATGAGTTAACCAAGCTCTGTCTTGGAAGGTGTTCAGAGATGGAATGCATTATTGACAAAATCAATGCTCATGAAGATGCGATTGCCCCAAGATTGGATGAGTTAGTGCTAGAAGATATGGATAATCTTCAACAACTACATCGTGGTCTTTCTTCTTTTAGCTTGTTCCAAAAGCTGGAAAGACTAACTATATCCAATTGCCCTCAGTTGCTCCATATATTCCCTGCTGATTGCAACTTAGGCAATCTTAAGTTTCTCGATATTTCTGGTTGTCTGAGGTTGACATCTCTCTTCCCTGTCTCTGCTATGTTCACTCTGCTGTCCTTACAAGAGCTCCGAATAGAAAGGTGCAGTGAACTGAAGCATGTAATAGAAGGAGAGGCTGATGGTGATGCAAGGGAGAATTTGAGCTTCCCAAAATTGAAAATTTTGTCTGTTGATAATTGCTGCAAATTAGAATCTGTATGCTCAGTCTTTTTAGCTCAAAGGTTTGTACAATTGCAGCGTCTATCCATAGCAAATGCTCCTCAGATGAAATTTTTGTTCGGTGAAAATGCTGATGAAGAACAACCACTGCGTGATCAAGATGAGACTCAAATAGCTCTTTCTATTTTGGAATACCTCACACTAACAAATCTTCCAAACCTTGTCGGAATTTGCTCAAAGAGGTATCATCTAAGGGGGCCATCTATAAAGACAATAGAATGCGAGGATTGTCCAAATCTGGAACTTCAGAGCCACCAGAGGAATGAAGAACACGAGTCGTTGGCAACTATAGAACGTATTGGACTTCATAACTGCGGAGTAGAATCCATTTCCCTCTATAAGACGCGCGTCGAAGAACAATATCCAACATTTCAATCCCTTAAAGAACTAGCCTTGGCAAACCATGCAAGATTGAAATTTGTCTTTTCTGCTCACATGTGTCAAAGTCTTCCAGAGTTAACTTCTGTAACCATATCTCGCTGTGAGGAGTTGGAGGCGATCTTTTCGGAGAATGAAGAGACTCAGAAAAATCCACCTAATGCTGAATCTTGTCTCCCGAAATTGAAGACGTTGGAAGTCTCTGAGTGCAACAAGCTTAAATTCATTTTATCTTTCATGATTGGTCCTACTGTCTCAATGCTGCCACAACTAAGCACTCTAGCCATATCAAATTCTTCCGAAATGGAAGAAATTTTCAAATGCCCAAATATTGAAGATCATCACATTGATAGTAGTGAAAAGGAGATTACATTCCCGAACATGAAATATCTGAAACTTGAGAACTTGCCAAGACTTGTTAATGTCTGCCAAGGATTCAAGTTGCAGACAGGGGAGTTTTGCACGGTTGCGGTTCATGACTGCCCAAAACTTATGCCAATTATGGGTGCATCTATTCATTGGACTAAAGAGGGACTTGTAAGGAAGTATGTGTTGAGATACAGCCAATTGGATAACAATGAGGCTCTCAATAATCTTCCACTTTCTGTTCTAAATATTGGAGAGTTTGATATTCAAAGTCCTAGAGTTGAACACAAGCGGCGAGTGATTAAATGTTGA 3834 0.398 MAEVGVSVAAKLAEYLVHPTLQQLQYLFCVGKITKNVEIRKEELILKQGRVQERVQEAVNRTERIDDEVHRWKNDVKSLIEEVENLEERLRANHGCLRGLCPTWRRYYLCKKLAKTIRRMIDLITKSNRLDPFSHPVIVPDIVYHSSQNFKLFNSTQMAFDQLWEALQNEGSSVIGLWGMGGSGKTTLVTEVGKKAKESQLFDRVVIATISQSLDIMQIQDEIADSLGLKLEEKSKTGRAKRIALRLQGGKPILVILDDIWAKLNLEHIGIPMGGNPQRSCKVVLTTRLLEVCTLMECQKTIKLDLLKEDEAWILFQSHANVNDAAQQDMARQIAMECKGLPIAIVAVGTCLKEKGVDEMKVMLYQLRNAKATNVNKGVRDAFTCLELSYDNLATREAKLLLLMCAMFTEDRNISVEDLFRYGVGLGLCEDVDSFEIARSQVRTTINDLINSSLLMYSSKFNTNAQEYVTMHDMVRDFALWKASKEDRTIGVNCGKELNELIADEVVKNCYAVSSWYENNKLFQLPSQLDVFQFPSQLDAPKLEFLLLQSGKLLDISHASFEGTKGLKVLIIRSFCFGHLKAKLLQPQSIQHLSNLRTLRLQGWNLRDISFVVSLTRLEILDLQTSMFERLPNGIENLNKLKLLDLSDCYIGECCCKVIGRCSQLEELYVTMHCPQSKIAKCYECLMAPTALIKLRRHRIEIGEHKFLYQRESARYLRLVQLNIAMLGVGIKDLAQRATTIEFHELEGGSRSFMPNVVQAIGAMNELTKLCLGRCSEMECIIDKINAHEDAIAPRLDELVLEDMDNLQQLHRGLSSFSLFQKLERLTISNCPQLLHIFPADCNLGNLKFLDISGCLRLTSLFPVSAMFTLLSLQELRIERCSELKHVIEGEADGDARENLSFPKLKILSVDNCCKLESVCSVFLAQRFVQLQRLSIANAPQMKFLFGENADEEQPLRDQDETQIALSILEYLTLTNLPNLVGICSKRYHLRGPSIKTIECEDCPNLELQSHQRNEEHESLATIERIGLHNCGVESISLYKTRVEEQYPTFQSLKELALANHARLKFVFSAHMCQSLPELTSVTISRCEELEAIFSENEETQKNPPNAESCLPKLKTLEVSECNKLKFILSFMIGPTVSMLPQLSTLAISNSSEMEEIFKCPNIEDHHIDSSEKEITFPNMKYLKLENLPRLVNVCQGFKLQTGEFCTVAVHDCPKLMPIMGASIHWTKEGLVRKYVLRYSQLDNNEALNNLPLSVLNIGEFDIQSPRVEHKRRVIKC 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3285g00003 1277 Gene3D - 390 482 IPR036388 -
Pral3285g00003 1277 Gene3D - 306 389 IPR042197 -
Pral3285g00003 1277 Gene3D - 145 305 IPR027417 -
Pral3285g00003 1277 FunFam Probable disease resistance protein At1g61300 145 301 - -
Pral3285g00003 1277 Coils Coil 69 93 - -
Pral3285g00003 1277 Gene3D Ribonuclease Inhibitor 504 684 IPR032675 -
Pral3285g00003 1277 Pfam NB-ARC domain 159 392 IPR002182 GO:0043531
Pral3285g00003 1277 SUPERFAMILY RNI-like 973 1189 - -
Pral3285g00003 1277 Gene3D Ribonuclease Inhibitor 839 949 IPR032675 -
Pral3285g00003 1277 Gene3D Ribonuclease Inhibitor 965 1169 IPR032675 -
Pral3285g00003 1277 Gene3D Ribonuclease Inhibitor 746 838 IPR032675 -
Pral3285g00003 1277 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 930 1158 - -
Pral3285g00003 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 402 IPR027417 -
Pral3285g00003 1277 SUPERFAMILY L domain-like 470 984 - -
Pral3285g00003 1277 PRINTS Disease resistance protein signature 174 189 - -
Pral3285g00003 1277 PRINTS Disease resistance protein signature 842 858 - -
Pral3285g00003 1277 PRINTS Disease resistance protein signature 247 261 - -
Pral3285g00003 1277 PRINTS Disease resistance protein signature 338 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3285g00003 Pral-Chr3285 51848 56929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3285g00003 175 646 WRKY Transcription Factor Family AT5G45050 22.567 2.75e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3285g00003 - - pcin:129317821 1360.13