Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3285g00002 ATGGCAGAGGTGGGAGTGTCGTTAGCGGCAAAACTTGCTGAATATCTAGTGGATCCAACTTTACGGCGGTTGCAGTATTTGTTCTGTGTCGGCAAAATCACCAAAAACGTTCAGATCAGAAAGGAGGAGCTGATACTCAAGCAAGGAAGGGTACAGGAACGTGTTCAAGAGGCCATCAACAGGACTGAGTGGATTGACGGTGAGGTTGACAGGTGGAAGAATGATGTAAAGAGTCTCATAGCAGAGGTGGAGGAATTGGAGGACGAACTAGGGGCCAACAATGGCTGTCATGGACAATGGTATCCTACTTGGAGGAGATATGATCTCTGCAAAAAGTTGGCTAAGACAACCCAGAGGATGATTGATCTAAACACAAAGAGTGATCGCTTCAATCCATTTTCTCACCCTGTTATTATTCCAGGTATAGAATATCACTCTTCTAAAGGTTTTATGTTCTTTGAGTCAACGAAAAAAGCACATGATGAACTATGGGCAGCGTTGCAAGATGATGATAGCTCTATGATCGGATTGTGGGGTATGGGCGGTTCAGGCAAAACCACATTGGTAAAGGAAGTAGGAAAGAAAGCCAAAGCATCAAAGCTATTTGATCAAGTAATAATTACAACAGTTTCTCAAACTCCAAATATTTGGAAGATCCAAGGTGAAATTGCAGACTTGTTGGGACTCAAGCCGGAGGAAGAAACTGAAGCGGGAAGGGCAAGAAGAATTGCATTGAAATTACAAAGTTCAAACAATCGAATTTTGATTGTACTAGATGATGTATGGGATATGCTGGACCTTGAGAATATAGGGAATCCCTATAGGGACGAAGGTCCAAGAAACTGTAAACTTCTTCTTACCACACGTCGTCAAGAGGTGTGTACTATGATGGATTGCCAGAAAACAATTTCCCTGGGTTTGTTAACAGAAGGTGAAGCTTGGGATCTATTTCAAACTCATGGTAGAGTAGATGATGGTGTAAGAAAAGTGGCTCAAGAAGTTGTCGCTGAATGTAGGGGATTACCCATTGCAATTGTGGCCATGGGGAAGTGCTTAAGAAGAAAAGGACTTGATGAGATGAATGTAGCATTGCATAGATTGAGACATTCAAAGCCACTTGATGAGGATAAAGCCTTTACTATTCTCAAGTTAAGCTATGATTACTTGAAAAATGCAGAGGCTAAGTTGTTGTTCTTGGTATGTGCCATGTTTCCTGAAGATCATGAAATCGAAATTGAAGATCTTTTTAGATATGGAGTTGGATTGGGCCTATGCAAAGATGCTGACTCATTTGAAATAGCAAGGAGCCAAGTTAGAGCAGCTATAAATGTTCTCGTTGACTCTTCATTGTTGATGTTTTCTGTCAACTCCAGAGAAGAAAAATGTGTGAAAATGCATGACATAGTTCGTGATGTAGCTTTATGGGTAGCAACTCAAGAGAATAGTACCATTATGGTAAACAATGGAAAAGAATGGAATAAATTGATTTCTGATGAAGTTATAAAAGATTGCTATGCTATATCTTCATGGTATGATGATAGTATATTATTTCAATTTTTGTCTCAACTGGGTGCTCCAAAACTTGAGTTTCTATTATTAGATTCTGTGAAACTTGTTGATACATTACATGCATCATTTGAAGGCTCTACAGGACTCAAGGCATTGATTATGATGTGCAAGTATTTCGATAGGATTGAGCTACAACCTCAATCAATTCAACACTTGTCTAATCTTCGGACTTTGCGATTGCAAGGTTGGAATTTATGTGACATCTCTTTTGTGGTAAGCCTTACAAGACTTGAAATTCTTGACTTGCAAAGAAGTATGTTTGAAAGATTGCCAAATGGAATTGAAAATTTAAACAAGCTGAAGTTGTTAGATTTGTCAGATTGTTACATAGGTGAATGTTGTTGCAAAGTAATAGGAAGATGCTCACAGTTAGAAGAGTTGTATGTTACCATGCATTGTCCACAGTCAAAAATTGCAAAATGCTATGAATGCCTTATGGCCCCTACTGCTTTGATTAAACTGAGAAGGTATAGGATAGGAATTGGGGAGCATAAATTGATGTCTCAAAAGGAAAGTGCAAGATATTTACGCTTGGTTCAGTTAAATATCGCCATGTTAGGTGTAGGAATCAAGGATCTTGCACAAAGAGCAACTACAATTAAATTTCATGAGCTTGAGGGAGGCAGCAGAAGTTTCATGCCTAATGTTGTTCAAGCTATCGGAGCCATGAATGAGTTAACTAAGCTCTGTCTTAGAAGGTGTTCAGAGATGGAATGCATTGTTGACAAAATTAATACTCATGAAGATGCGATTTCCCCAAGATTGGATGAGTTAGTGCTAAAAGATATGGATAATCTTCAACAACTACATCGTGGTCTTTCTTCTTTTAGCTTGTTCCAAAAGCTAGAAACACTACATATATCCAATTGCCCTCAGTTGCTCCATATATTCCCCGCTGATTGCAACATAGGCAATCTTAAGTTTCTCAATATTTTTGGTTGTCCGAGGTTGACATCTCTCTTCCCTGTCTCTGCTGTGTGCACTCTGCTGTCCTTACAAGAGCTCCAAATAGAAAGGTGCAATGAACTGAAGCATGTAATAGAAGGAGAGGGTGGTGGTGATGCATTGGAAAGACTATGTATATCCAATTGCCCTCAGTTGCTCCATATATTCCCTGCTGATTGCAACTTAGGCAATCTTAAGTTTCTCAATATTTTTGGTTGTCCGAAGTTAAGATCTCTCTTCCCTGTCTCTGTTGTGTGCACTCTATTGTCATTACGAGAGCTCCGAATACAAAGTTGCAGTGAACTGAAGCATGTTTTAGAGGGAGAGAGTGATGGTGATGCATGGGAGAATTTGAGCTTCCCAAAATTGAAAATTTTGTCTGTTGGTGATTGCTGCAAATTAGAATCTGTATGCTCAGTCTTTTTAGCTCAAAGGTTTGTACAATTGCAGCGTCTATCCATAACAAATGCTCCTCAAATGAAATTTGTGTTCGGTGAAAATGCTGATGAAGAACAACCACTGCGTGATCAAGATGAGACTCAAATAGCTCTTTCTCTTTTGGAATACCTCACACTAACAAATCTTCCAAACCTTGTTGGAATTTGCTCAGAGAGGTATCATCTAAGGGGGCCATCTATAAAGACAATAGAATGGAAGGATTGTCCAAATCTGGAATTTGAGAGCCACCAGAGGAATGAAGAACACGAGTCGTTGGCAACTATAGAACGTATTCAACTTCATAACTGCGGAGTAGAATCCATTTCCCTCTATAAGACGCGCGTTGAAGAACAATATCCAACATTTCAATCCCTTAAAACACCTAGACTTGGATAA 3348 0.394 MAEVGVSLAAKLAEYLVDPTLRRLQYLFCVGKITKNVQIRKEELILKQGRVQERVQEAINRTEWIDGEVDRWKNDVKSLIAEVEELEDELGANNGCHGQWYPTWRRYDLCKKLAKTTQRMIDLNTKSDRFNPFSHPVIIPGIEYHSSKGFMFFESTKKAHDELWAALQDDDSSMIGLWGMGGSGKTTLVKEVGKKAKASKLFDQVIITTVSQTPNIWKIQGEIADLLGLKPEEETEAGRARRIALKLQSSNNRILIVLDDVWDMLDLENIGNPYRDEGPRNCKLLLTTRRQEVCTMMDCQKTISLGLLTEGEAWDLFQTHGRVDDGVRKVAQEVVAECRGLPIAIVAMGKCLRRKGLDEMNVALHRLRHSKPLDEDKAFTILKLSYDYLKNAEAKLLFLVCAMFPEDHEIEIEDLFRYGVGLGLCKDADSFEIARSQVRAAINVLVDSSLLMFSVNSREEKCVKMHDIVRDVALWVATQENSTIMVNNGKEWNKLISDEVIKDCYAISSWYDDSILFQFLSQLGAPKLEFLLLDSVKLVDTLHASFEGSTGLKALIMMCKYFDRIELQPQSIQHLSNLRTLRLQGWNLCDISFVVSLTRLEILDLQRSMFERLPNGIENLNKLKLLDLSDCYIGECCCKVIGRCSQLEELYVTMHCPQSKIAKCYECLMAPTALIKLRRYRIGIGEHKLMSQKESARYLRLVQLNIAMLGVGIKDLAQRATTIKFHELEGGSRSFMPNVVQAIGAMNELTKLCLRRCSEMECIVDKINTHEDAISPRLDELVLKDMDNLQQLHRGLSSFSLFQKLETLHISNCPQLLHIFPADCNIGNLKFLNIFGCPRLTSLFPVSAVCTLLSLQELQIERCNELKHVIEGEGGGDALERLCISNCPQLLHIFPADCNLGNLKFLNIFGCPKLRSLFPVSVVCTLLSLRELRIQSCSELKHVLEGESDGDAWENLSFPKLKILSVGDCCKLESVCSVFLAQRFVQLQRLSITNAPQMKFVFGENADEEQPLRDQDETQIALSLLEYLTLTNLPNLVGICSERYHLRGPSIKTIEWKDCPNLEFESHQRNEEHESLATIERIQLHNCGVESISLYKTRVEEQYPTFQSLKTPRLG 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3285g00002 1115 Coils Coil 69 89 - -
Pral3285g00002 1115 Pfam NB-ARC domain 158 387 IPR002182 GO:0043531
Pral3285g00002 1115 PRINTS Disease resistance protein signature 248 262 - -
Pral3285g00002 1115 PRINTS Disease resistance protein signature 618 634 - -
Pral3285g00002 1115 PRINTS Disease resistance protein signature 174 189 - -
Pral3285g00002 1115 PRINTS Disease resistance protein signature 338 352 - -
Pral3285g00002 1115 Gene3D Ribonuclease Inhibitor 894 1006 IPR032675 -
Pral3285g00002 1115 FunFam Probable disease resistance protein At1g63360 386 475 - -
Pral3285g00002 1115 Gene3D - 386 474 IPR036388 -
Pral3285g00002 1115 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 879 1002 - -
Pral3285g00002 1115 SUPERFAMILY L domain-like 464 994 - -
Pral3285g00002 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 401 IPR027417 -
Pral3285g00002 1115 Gene3D Ribonuclease Inhibitor 741 888 IPR032675 -
Pral3285g00002 1115 FunFam Probable disease resistance protein At1g61300 153 302 - -
Pral3285g00002 1115 Gene3D - 149 304 IPR027417 -
Pral3285g00002 1115 Gene3D Ribonuclease Inhibitor 511 667 IPR032675 -
Pral3285g00002 1115 Gene3D - 307 385 IPR042197 -
Pral3285g00002 1115 SMART AAA_5 171 373 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3285g00002 Pral-Chr3285 21486 25441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3285g00002 175 480 WRKY Transcription Factor Family AT5G45050 25.949 3.22e-14 75.9