Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3283g00014 ATGGATTCATTTGAGCCAAATGGAAACGGGAATGATGACAGTTTGCCGCCACCACCACCTCCGCCTCCTGAAGTGCCACCAAATATTGTTCCAGTGAAAGTAGAAGAGCTGCCTCCTGAACCAGCTAAGAAGCCTTCTCGAGTTCCAATAGCTAGACGGGGCTTGGGATCCAAAGGAAGTAAACTGCAACTTCTCACCAATCACTTCAAAGTTGATGTCAACAACAAGGATGGGCATTTCTTTCATTACAGTGTAGCCCTTTTCTATGAAGATGGACGACCTGTGGAAGGTAAGGGTGTGGGAAGAAAGTTAATTGATAGAGTACAGGAGACTTACGCATCTGAGCTAGCGGGAAAAGACTTTGCCTATGATGGTGAGAAGAGTTTGTTTACTGTTGGATCTCTTCCTCGAAACAAACTTGAGTTTACGGTTGTTCTAGAGGATGTCATATCAAACAGAAATAATGGAAATTGCAGCCCTGATGGTCATGGAAGTCCAAATGAGGGTGACAGGAAGAGGATTCGGCGACCGAATCGTGCAAAAACATTTAAAGTGGAGATCAGCTTTGCTGCAAAGATTCCGATGCAGGCCATTGCCAACGCATTACGTGGGCAGGAGACTGAGAATTTTCAAGAAGCCATAAGAGTTCTTGATATTATATTGAGGCAAAATGCTGCTAAGAAAGGCTGTCTACTTGTTCGGCAATCCTTCTTCCACAATGATCCAATGAATTTTGCTGATGTGGGCGGTGGTGTTCTGGGCTGCCGGGGATTTCATTCAAGTTTTAGGACTACACAGAGTGGCTTATCCCTCAACATCGATGTATCAACTACGATGATAATACAACCTGGGCCTGTGGTGGACTTCTTAATTGCCAACCAAAACGTGAGACATCCTTCTTCCCTTGACTGGGCCAAGGCTAGAAAGACTCTGAAGAATTTGAGGATTACAACGACCCCATCTAATCAAGAGTACAAGATATGTGGGCTCAGTGAACTCCCATGTCGTCAACAGACGTTTACTCTCAAGAGTAAGGGTGGTGATGATAGTGCAGCAGAGGAAATAACTGTTCTTGATTATTTTGAAAATTATCGCAAGATACATCTTAAGTACTCCGCTGATATGCCTTGCGTTAATGTTGGGAAACCAAAACGCCCAACTTATATTCCCATTGAGCTTTGCTCTTTGGTATCCCTGCAACGTTATACAAAGGCACTTACTACACTGCAAAGGGCATCATTGGTTGAAAAGTCTCGGCAGAAGCCACAAGAGAGGATGAAGGTTTTGTCTGATGTTTTAAAAGTCAGCAAGTATGATTCTGATCCTATGCTACATAATTGTGCAATTCGAATAAATACTGGTTTTACACAAGTGGATGGCCGTGTCCTCCCAGCTCCAAGGTTGAAGTTTGGCAATGGAGAAGAGTTCAATCCAAGAAATGGGAGGTGGAATTTTAACAATAAGAAATTTGTGCAGCCAACAAAGATAGAGCGATGGGCTGTGGCAAACTTTTCTGCACGTTGTGATGTGCAATCTCTTGTTCGGGATCTGACTAGATGTGCACAAGCGAAAGGAATTCAAATAGATCCCCCATTTGATGTATTTGAGGAAAGTCCGCAGTTTAGGCGTGCCCCACCTATGGTTAGAGTGGATAAGATGTTTGAAGAGATACAGTCGAAACTTCCTGGAGCACCTCAGTTCCTTCTCTGTCTTCTTCCGGAGCGGAAAAATTGTGATATATATGGCCCCTGGAAAAAGAAGAATCTTGCTGACTTTGGAATTGTTAATCAGTGCATGTGTCCGCAAAGGGTCAATGATCAATATCTGACCAATGTGTTGCTGAAAATCAATGCTAAGCTAGGTGGGATGAATTCATTTTTATCTGTTGAAAAATCTCCTACTCTGCCCATTGTTTCCAAAGTTCCTACCATTATCCTTGGGATGGACGTGTCCCATGGCTCACCTGGGCAGACGGATATTCCTTCCATTGCAGCGGTGGTGAGCTCCCGACAGTGGCCTTTGATCTCGAAGTATAGGGCCTGTGTTCGAACCCAGTCTCCAAAGGTTGAAATGATTGATAATCTGTTCAAGCCAGTAGGTGAAAAGGAAGATGAGGGCATTATCAGGGAACTTCTTGTTGATTTCTATCAAAGTTCTGGTAATAGGAAGCCTGAAAACATAATCATATTCAGGGATGGGGTTAGTGAATCACAGTTCACTCAAGTTTTAAACATCGAGCTTAATCAAATCATTGAGGCCTGTAAATTCCTTGATGAAAAGTGGGACCCCAAATTTGTGGTGATTGTTGCTCAGAAAAATCACCACACAAAATTTTTCCAGAATGGGTCTCCTGATAATGTCCCCCCTGGAACTATTATTGACAACAAAATTTGTCATCCCCGAAATTATGATTTCTACTTATGTGCACATGCTGGAATGATCGGAACCACTAGGCCGACACATTACCATGTTCTGTTAGATGAGATTGGTTTCTCTGCAGATGATCTACAAGAATTGGTGCATTCTCTTTCATACGTTTATCAGCGGAGCACCACTGCCATATCTGTCGTTGCTCCTGTCTGTTATGCACACCTGGCAGCAACTCAGCTGGGGCAGTTCATGAAATTTGAGGACAAGTCTGAGACTTCGTCGAGCCATGGTGGCCAGTCTTCTGCCTCTGGTGGCACTGTTCCTCAGTTGCCGCCATTGCAGGAAAATGTCTGCAATTCCATGTTCTTCTGTTGA 2745 0.4372 MDSFEPNGNGNDDSLPPPPPPPPEVPPNIVPVKVEELPPEPAKKPSRVPIARRGLGSKGSKLQLLTNHFKVDVNNKDGHFFHYSVALFYEDGRPVEGKGVGRKLIDRVQETYASELAGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDVISNRNNGNCSPDGHGSPNEGDRKRIRRPNRAKTFKVEISFAAKIPMQAIANALRGQETENFQEAIRVLDIILRQNAAKKGCLLVRQSFFHNDPMNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNVRHPSSLDWAKARKTLKNLRITTTPSNQEYKICGLSELPCRQQTFTLKSKGGDDSAAEEITVLDYFENYRKIHLKYSADMPCVNVGKPKRPTYIPIELCSLVSLQRYTKALTTLQRASLVEKSRQKPQERMKVLSDVLKVSKYDSDPMLHNCAIRINTGFTQVDGRVLPAPRLKFGNGEEFNPRNGRWNFNNKKFVQPTKIERWAVANFSARCDVQSLVRDLTRCAQAKGIQIDPPFDVFEESPQFRRAPPMVRVDKMFEEIQSKLPGAPQFLLCLLPERKNCDIYGPWKKKNLADFGIVNQCMCPQRVNDQYLTNVLLKINAKLGGMNSFLSVEKSPTLPIVSKVPTIILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVGEKEDEGIIRELLVDFYQSSGNRKPENIIIFRDGVSESQFTQVLNIELNQIIEACKFLDEKWDPKFVVIVAQKNHHTKFFQNGSPDNVPPGTIIDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPVCYAHLAATQLGQFMKFEDKSETSSSHGGQSSASGGTVPQLPPLQENVCNSMFFC 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3283g00014 914 Gene3D paz domain 277 402 - -
Pral3283g00014 914 MobiDBLite consensus disorder prediction 155 177 - -
Pral3283g00014 914 Gene3D - 634 914 IPR036397 GO:0003676
Pral3283g00014 914 Pfam Argonaute linker 2 domain 424 470 IPR032472 -
Pral3283g00014 914 MobiDBLite consensus disorder prediction 878 899 - -
Pral3283g00014 914 FunFam Protein argonaute 7 278 402 - -
Pral3283g00014 914 FunFam Protein argonaute 3 635 914 - -
Pral3283g00014 914 SUPERFAMILY PAZ domain 278 438 IPR036085 GO:0005515
Pral3283g00014 914 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 42 877 - -
Pral3283g00014 914 Pfam Piwi domain 568 875 IPR003165 GO:0003676
Pral3283g00014 914 CDD PAZ_argonaute_like 283 397 - -
Pral3283g00014 914 SMART DUF1785_2 231 283 IPR014811 -
Pral3283g00014 914 SMART Piwi_a_2 567 875 IPR003165 GO:0003676
Pral3283g00014 914 MobiDBLite consensus disorder prediction 1 53 - -
Pral3283g00014 914 Gene3D - 462 628 - -
Pral3283g00014 914 MobiDBLite consensus disorder prediction 12 34 - -
Pral3283g00014 914 Pfam Argonaute linker 1 domain 233 281 IPR014811 -
Pral3283g00014 914 CDD Piwi_ago-like 442 869 IPR045246 -
Pral3283g00014 914 SUPERFAMILY Ribonuclease H-like 551 873 IPR012337 -
Pral3283g00014 914 Pfam N-terminal domain of argonaute 61 221 IPR032474 -
Pral3283g00014 914 ProSiteProfiles PAZ domain profile. 308 398 IPR003100 GO:0005515
Pral3283g00014 914 Pfam PAZ domain 287 414 IPR003100 GO:0005515
Pral3283g00014 914 ProSiteProfiles Piwi domain profile. 567 875 IPR003165 GO:0003676
Pral3283g00014 914 Pfam Mid domain of argonaute 477 530 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3283g00014 Pral-Chr3283 38930 47980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3283g00014 52 914 Eukaryotic Initiation Factors Gene Family AT5G43810 35.189 7.41e-168 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3283g00014 K11593 - gmx:100820376 1496.49