Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3281g00026 ATGCAACTCAGACAGAGAAATTTTGAGCAAAATGGAGGAAACTTGCTTCTACAACAACTTTCACAACAACAAAGATATACCGACAGAACCAGAATATTTACAAAAGTTGAGCTTAAGAATGCCACAAACAACTTTGATGAAAGCAGAATTCTTGGTCGTGGAGGACAAGGCACAGTTTATAAAGGTATATTGCCAGACAACACAATTGTTGCAATTAAGAAGTCCAGGTTGGGGGATCCCCAAAATATTAAAAGTTTTATCAATGAAGTGTTTGTGCTTTCCCAAATCAACCACAGGCATGTGGTTAAACTTTTGGGATGTTGTCTTGAAACTGAAGTGCCTTTGTTAGTGTATGAGTTTGTAGAGAATGGAAGCCTTCTTGACCACCTAGACCCATCAAAAAATGAATGTTCTATCACATGGGAGACTCGATTAAGAATAGCTACAGAAACTGCTGAGGCCATTTCCTATTTACATTCTGCAGCTTCTATTCCAATTATCCATAGAGATATCAAGTCTGCCAATATACTTTTAGACCATAATGATAGAGCAAAGGTATCTGATTTTGGAGCTTCAAGACTTGTCCATCTTGGTGAAGCTCAAGTTGCCACTGTGGTTCAAGGAACAATAGGATATCTGGATCCTGAGTACCTTCAAACAGGTCAGTTGAATGAGAAGAGTGATGTCTATAGTTTTGGAATTGTGCTGCTGGAGTTACTCACTGGGAGTAAGGCTTTTAAATTCAATACATTGGCTAGCCATTTTGTATCTTCAATGAGAGAAGATCGCCTGTGGGAGATTCTTGATAGGCGAGTACTAGACCAAAGGAAGAACGCAAAACAGTTGAAAGAAGTAGCCTTATTGGCAAGCAGATGCGTTAGGGTTAATGGAGAGGAACGGCCAACAATGAAAGAAGTAGCAATGGAGTTAGAGGGTCTAATTGCAATGGAAAAGCATCTTCAGGAGAAGGACAAGGATATGATGAAAGCAGAAGAAAGTGAATACTTATTGGGCCATTGCCCTTATGATGGATATGGGGGTGCCAGTGCTAGCTTCTCAGTTGCTAGCTATGATAGCATACAAAAGCAAGTAGCATTTGAGATTATGGATAGTGGGCGATAA 1122 0.3984 MQLRQRNFEQNGGNLLLQQLSQQQRYTDRTRIFTKVELKNATNNFDESRILGRGGQGTVYKGILPDNTIVAIKKSRLGDPQNIKSFINEVFVLSQINHRHVVKLLGCCLETEVPLLVYEFVENGSLLDHLDPSKNECSITWETRLRIATETAEAISYLHSAASIPIIHRDIKSANILLDHNDRAKVSDFGASRLVHLGEAQVATVVQGTIGYLDPEYLQTGQLNEKSDVYSFGIVLLELLTGSKAFKFNTLASHFVSSMREDRLWEILDRRVLDQRKNAKQLKEVALLASRCVRVNGEERPTMKEVAMELEGLIAMEKHLQEKDKDMMKAEESEYLLGHCPYDGYGGASASFSVASYDSIQKQVAFEIMDSGR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3281g00026 373 Gene3D Transferase(Phosphotransferase) domain 1 121 337 - -
Pral3281g00026 373 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 316 IPR045274 GO:0007166
Pral3281g00026 373 SMART serkin_6 45 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00026 373 Pfam Protein kinase domain 46 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00026 373 SUPERFAMILY Protein kinase-like (PK-like) 23 310 IPR011009 -
Pral3281g00026 373 FunFam Wall-associated receptor kinase 2 121 334 - -
Pral3281g00026 373 CDD STKc_IRAK 51 313 - -
Pral3281g00026 373 FunFam Wall-associated receptor kinase 2 15 120 - -
Pral3281g00026 373 Coils Coil 313 333 - -
Pral3281g00026 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pral3281g00026 373 Gene3D Phosphorylase Kinase; domain 1 10 120 - -
Pral3281g00026 373 ProSiteProfiles Protein kinase domain profile. 45 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3281g00026 Pral-Chr3281 487681 490118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3281g00026 2 373 Receptor kinase-like Gene Family AT1G21230 56.614 1.57e-135 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral3281g00026 Pkinase 4.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3281g00026 - - pcin:129317315 594.734