LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3281g00012	ATGAAACTTCCCAAGTCCATTGGAAACTTGTCTGATTCTCTACAAGTGCTGTTGATACACTCCTGCGAGATTAATGGTAAAATACCATCAGAAATTGGGAATTTGTCTAACTTGTATCACTTATCTTTCGCTGAAAATGTCTTAAGTGGATCAATTCCAGCAACAATTAGCAACTTGCAGGCTCTTCAGCTTTTGAATCTTATGGGCAATGAGCTAGATGGTTTGATTGTTGATGAGCTTTGTGACATTAGAAGGCTTGCATATTTATATCTGTCCCGAAACCAATTTTCTGGAGCAATGCCGTTTTGCTTAGGAAATCTTATGTACCTGCAGGAGCTTTATTTGGACGCCAATAAATTGACTGCTGAGGTACCTTCTTCCTTTTGGAATTTGACAGGTATATTGCAAGTAAACCTATCTTCCAACATGTTGGTTGGAAATCTTTCATTCAAGATTGGGAACATAAAATCTCTCACGCTATTAGATTTGTCCAGAAATCATCTTTCAGGCACCATTCCAACAACCATTGGTAGCTTGCAAAATTTGCAAATTTTCTCCTTAACGCATAACATATTGCAAGGAAAGATTCCGGTATCACTTGGGAATTTGCTAAGCTTAGAAAAGCTAGACCTTTCCCAAAATAATTTGTCTGGTGAGATTCCTAAATCGCTAGAGTCACTTACATCCCTTAAGTACGTGAATCTCTCTTATAATGAACTACAAGGTGAGATTCCTAGCGGTGGGGTCTTCAAAGATTTGTCCGCTGAATCTTTCATGATGAATAAAGCACTTTGTGGTGAGGCAAAAATGCAAGTTCCTCCATGCAGAAAAGAAAAAAGAAAGAGGTCAAAGGCAAAATTGATTTTGCTGATGTACATCCTACCTGTGGTTTTGTCAACAATTTTCATTGGTTTAGGCATTATCCTCTTTCAACGCAAACGAATAAATTCCAGGCATACCATGAAACAAGATTTATCAACTTTAGGAACGCCAATAAGGATTTCTTATTTTGAAATTTTGGATGCAACCAACAGATTTGATAAGAGCAACTTACTGGGAAGTGGAAGTTTTGGTTCTGTATTCAAAGGAAGGCTTTCAAGTGGAATAATGGTTGCTGTCAAAATATTCAATTTTGATTCTGAAACATTGTCAAGGAGCTTTGAAGTGGAATGCGATGCAATGCGTAATGTGCGTCATCGCAATTTGGTGAAGATCATTAGTAGTTGTTCCAATGTTGATTTCAAGTGTTTGATAATGGAGTTCATTCCCAATGGAAGTCTTGAAAAATGGTTATATTCTCATAACTATTGTTTGGATTTTCTGCAAAGGTTAAATATAATGATAAATATCGCATCTGCTTTGGAATATCTCCATCATGGCTTACCAAAACCAATAGTCCACTGTGATCTGAAGCCAAGTAACATTTTGCTGGATGATAAAATGGTTGCTCATTTGAGTGACTTTGGACTTGCAAAATTTTTAGATGAAGGAAAATCGAGGACACTCACAGAGACAATACCTACAATTGGTTATGTTGCACCAGAATACGGATCTCTTGGAATTGTTTCAACGAAAGTTGATGTGTATAGTTTCGGAATAATACTAATAGAAGTGTTCACAAGAAAAAGGCCAACAGAAGATATGTTTGTGGATCGCTTGAGCTTGAAGAGTTGGGTAAGTGAATCATTGTCACATTCATTAACTCAGGTCATAGATTCCAATTTAATACAAGGAGATGATCCGCGATATATTCCTGATATTTTGACAACTACATCCACTATCTTTGAATTGGCCTTGAACTGTTGTGCCGATGTTTCACGAAAGCGTTGCAGTATGTCAGATGTTGTGGCATCATTGAACAAGATCAAGGACATGTTTATGCAAAGATGTCACTTGGATAAATATTGA	1908	0.37	MKLPKSIGNLSDSLQVLLIHSCEINGKIPSEIGNLSNLYHLSFAENVLSGSIPATISNLQALQLLNLMGNELDGLIVDELCDIRRLAYLYLSRNQFSGAMPFCLGNLMYLQELYLDANKLTAEVPSSFWNLTGILQVNLSSNMLVGNLSFKIGNIKSLTLLDLSRNHLSGTIPTTIGSLQNLQIFSLTHNILQGKIPVSLGNLLSLEKLDLSQNNLSGEIPKSLESLTSLKYVNLSYNELQGEIPSGGVFKDLSAESFMMNKALCGEAKMQVPPCRKEKRKRSKAKLILLMYILPVVLSTIFIGLGIILFQRKRINSRHTMKQDLSTLGTPIRISYFEILDATNRFDKSNLLGSGSFGSVFKGRLSSGIMVAVKIFNFDSETLSRSFEVECDAMRNVRHRNLVKIISSCSNVDFKCLIMEFIPNGSLEKWLYSHNYCLDFLQRLNIMINIASALEYLHHGLPKPIVHCDLKPSNILLDDKMVAHLSDFGLAKFLDEGKSRTLTETIPTIGYVAPEYGSLGIVSTKVDVYSFGIILIEVFTRKRPTEDMFVDRLSLKSWVSESLSHSLTQVIDSNLIQGDDPRYIPDILTTTSTIFELALNCCADVSRKRCSMSDVVASLNKIKDMFMQRCHLDKY	635

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3281g00012	635	ProSitePatterns	Protein kinases ATP-binding region signature.	352	374	IPR017441	GO:0005524
	Pral3281g00012	635	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	465	477	IPR008271	GO:0004672\|GO:0006468
	Pral3281g00012	635	FunFam	Serine-threonine protein kinase plant-type	328	421	-	-
	Pral3281g00012	635	FunFam	LRR receptor-like serine/threonine-protein kinase GSO1	1	279	-	-
	Pral3281g00012	635	SUPERFAMILY	L domain-like	12	266	-	-
	Pral3281g00012	635	PANTHER	OS04G0122200 PROTEIN	3	624	-	-
	Pral3281g00012	635	Gene3D	Phosphorylase Kinase; domain 1	330	421	-	-
	Pral3281g00012	635	Pfam	Protein kinase domain	347	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3281g00012	635	Pfam	Leucine rich repeat	84	144	IPR001611	GO:0005515
	Pral3281g00012	635	Pfam	Leucine rich repeat	157	216	IPR001611	GO:0005515
	Pral3281g00012	635	Gene3D	Transferase(Phosphotransferase) domain 1	422	632	-	-
	Pral3281g00012	635	ProSiteProfiles	Leucine-rich repeat profile.	205	228	IPR001611	GO:0005515
	Pral3281g00012	635	ProSiteProfiles	Protein kinase domain profile.	346	627	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3281g00012	635	Gene3D	Ribonuclease Inhibitor	1	284	IPR032675	-
	Pral3281g00012	635	SMART	serkin_6	346	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3281g00012	635	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	422	631	-	-
	Pral3281g00012	635	PRINTS	Leucine-rich repeat signature	203	216	-	-
	Pral3281g00012	635	PRINTS	Leucine-rich repeat signature	158	171	-	-
	Pral3281g00012	635	SUPERFAMILY	Protein kinase-like (PK-like)	320	619	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3281g00012	Pral-Chr3281	393844	396256	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3281g00012	3	628	Receptor kinase-like Gene Family	AT3G47570	37.615	3.00e-134	416

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XII-1	Pral3281g00012		Pkinase	2.5e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3281g00012	-		K13420	qsa:O6P43_031966	744.577