Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3281g00011 ATGGGAAACCTTATCTTTCATTTCTGCTTCATCTTCTTCATGGCTTACCCAGGTTTTTGTCAGTCCAATTTTTCTAATTCCGATGAAGTGGCTCTTCTTGCTTTCAAATCTTCTGCCAGGGATCCTTACAATCACTTGCAAAACTGGTCCAATTCGTCTTCCATATGCAATTGGTCTGGAGTTACATGTGATTCTAAGCATGAGAGAGTAAGAGTATTGAGCCTTGAAAAGATGGGTCTCAAGGGAACCTTGCCCTCACAGATTGGCAATTTGTCGTTCTTAGTGAAACTTGACCTCAGCAGCAACAACTTGTATGGTAAGTTGCCAGAAGAGTTGCTTCACTTGCAGAGGTTAGAAACTCTCAACCTGAGCTATAATGCTTTCAGTGGAGAAATCCCAAGTTCGATAGGAAGCTTATTTATGCTTCAACACTTGATTCTTGGCAATAATAACTTTGGAGGCATCATTCCTGCAAGTATATCCAATTTGTCTACGTTGGAGACCTTGGATTTGAATTCTAACTCTCTCCAAGGATCTATTCCGTTTGATATTGGAAGACTTCAACGTCTCAAAATTTTACGCCTTTCTGTAAACAAGCTTTCAGGAATTATGCCTCCATCTATTTCTAACATTTCCTCACTTGAGCGGCTCATTTTGTCTCTCAACCTCTTACAAGGATATATTCCCATAGAAATGAATAAGCTTACAAAGCTGAAAATTATATACTTGGGAGGTAATAAGTTGAGTGGCCAAATACCAAGAAGTATTGGGAACTTGATCATGCTTCAAGAGTTATCTCTTTCAAACAATAACTTACAAGGAGACATTCCCAACGAAATTAGCAATCTTACAAATGCGAAGAATATATACCTGGAAACCAATCAATTGTCTGGTCACATACCAAAAAGCATTGGAAAATTGACAACGCTTCAAGAGTTATCTCTTGCCAACAACAACTTTGAAGGAATTATTCCCAATGAAATTAGAAGCCTTACAAATCTGAAAATAATGGACATATCAGCTAATCAACTATTTGGCCACATACCAAGAGGCATTGAAAACTTGACTATGCTTCAAAATTTGAACCTTGAAAACAATAATTTAGAAGGCTCAATACCTTTGGAAATAGGCAATCTTCAACAACTTGAGACATTATTGTTGTCTCAAAACAAATTGACCGAATATATTCCATCCGAAGTTTTCAACATCTCAACTTTAGAATTCTTGTCTCTCTCAAACAATTCTCTATCAGGAAGTCTTCCATCAGATCTTGGATATGGCCTTCCTCATCTACAAGAGTTGTATTTATGGGGAAACAAACTTTCTGGAAGAATCCCGAGTACTATATCCAATGCTTCTAAGTTAACCATTCTAGAATTGGAGCAAAATAATTTTGAAGGGGTTTTACCAAGCACACTTGGACATTTAAGATACTTAGAAACCCTTTCGGTGCATGGGAACAATTTCACCATAATGGATGATTTAAATTCTGAAACTGGCTTTTTTAGCTCGTTGTCAAAATGTAGACATTTGAAAACTCTGATTCTCTCAGAGAACCCATTGCGTATGAAACTTCCCAACTCCATCGGAAACTTATCTGATTCTTTACAGATGCTGATGATCGACTTCTGCGGGGTTTATGGCAACATACCATCAGAAATTGGAAATCTGTCTAACTTGTTTGAGATATCTTTTGCTGGAAATGTTTTAAATGGATCAATTCCAGCAACAATTAGCAACTTACAGGCTCTTCAGCATTTGAATCTTGTGGGCAATGAGCTAGATGGTTTCATTGTAGATGAGCTTTGTGACATTAGAACACTTGCATATTTATATCTATCTCGAAACAAGCTTTCTGGAGCAATACCCCCTTGCTTAGGAAACCTTATGTCCCTACGAAGACTTTACTTGGGCGGCAATAAGTTGATTTCTGATATACCTTCTTCCTTTTGGAACTTGACGGGTATATTGGAAGTAAACCTATCTTCCAATATGTTAGTTGGAAATCTTTCATTCAAGATTGGGAACATGAAAGCTCTTATTCGATTAGACTTGTCAAGAAATCATATTTCAGGCACCATTCCATCAACCATAGGCAGCTTACCAAATTTGCAAAATGTCTCCTTAGCAGATAACATATTGCAAGGGACGATTCCGGAATCACTTGGGAATTTGCTGAGCTTAGTAAAGCTAGACCTTTCCCAAAATAATTTGTCTGGTGAGATTCCTAAATCACTAGAGTCACTTACATCCCTTAAATATGTTAATCTCTCTGATAACAGACTGCAAGGTGAGATTCCTAGTGGTGGGGTCTTCAAAGATTTGACGGCTGAATCTTTCATGATGAATAAAGCACTTTGTGGTGAGCCGAAAATGCAAGTGCCTCCATGCAGAAAAGAACAAAGAAAGAGGTCAAAGGCAAAATGGATTTTGTTGAAATACATACTACCTATGGTTTTGTCAGCAATTTTAGTTCTTTCAGGCATTATCCTGTTTCGTCGTAAACGAAGGAATTCTAGGCATACCATAGTGAAACAAGATTTATCAACTTTAGGAATGCCAAGAAGGATTTCGTATTTTGAAATATTGGATGCAACCAACAAATTTGATGAGAGTAACTTACTGGGAAGTGGAAGTTTTGGTTCTGTATTCAAAGGAAGGCTTTCAAATGGAATAATGGTTGCTTTTAAAATATTTAATTCTGATTCAGAAGCTATGTCAAAGAGCTTTGAAGTGGAATGTGACACAATGCGTAATGTGCGTCACCGCAATTTGGTGAAGATCATTAGTAGTTGTTCCAGTGATGACTTCAAGTGTTTGATAATGGAGTTCATTCCCAATGGAAGTCTTGAAAAATGGTTATATTCTCATAACTACTGTTTGGATTTTTTGCGAAGGTTAAATATAATGATAAATATTGCATCTGCTTTGGAGTATCTCCATCATGGCTTGCCAACACAAATAGTTCACTGTGATCTGAAGCCAAGTAACATTTTGTTAGATGACAACATGGTTGCTCATGTGAGTGACTTTGGAATTGCAAAATTTTTAGATAAAGGGAAATCTAGGACACTCACAGAAACAATACCTACAATTGGTTATGTAGCACCAGAATATGGATCTCTTGGAATAGTTTCAGCAAAAGTTGATGTGTACAGTTTTGGAATAATACTGATAGAAGTATTCACAAGAAAAAGGCCAACAGAAGATATGTTTGTGGATGGACTGAACTTAAATAGTTGGGTAAGTGAATCAATGTCACATTCACTAACTCAAGTGATAGATTGCAATTTATTAAAAGGAGATCATGGTGAACAATATATGGCTAACATTTTGACATCTACATCCTCTATTCTTCAATTGGCCTTGAATTGTTGTGCCAATTTTTCACAAAGGCGTTGCAATATGTCAGAGGTTGTGGTATCATTAAACAAGATCAAGGACATGTTTGTTCAATCACGTCATTTAAAGAAATATTGA 3480 0.3678 MGNLIFHFCFIFFMAYPGFCQSNFSNSDEVALLAFKSSARDPYNHLQNWSNSSSICNWSGVTCDSKHERVRVLSLEKMGLKGTLPSQIGNLSFLVKLDLSSNNLYGKLPEELLHLQRLETLNLSYNAFSGEIPSSIGSLFMLQHLILGNNNFGGIIPASISNLSTLETLDLNSNSLQGSIPFDIGRLQRLKILRLSVNKLSGIMPPSISNISSLERLILSLNLLQGYIPIEMNKLTKLKIIYLGGNKLSGQIPRSIGNLIMLQELSLSNNNLQGDIPNEISNLTNAKNIYLETNQLSGHIPKSIGKLTTLQELSLANNNFEGIIPNEIRSLTNLKIMDISANQLFGHIPRGIENLTMLQNLNLENNNLEGSIPLEIGNLQQLETLLLSQNKLTEYIPSEVFNISTLEFLSLSNNSLSGSLPSDLGYGLPHLQELYLWGNKLSGRIPSTISNASKLTILELEQNNFEGVLPSTLGHLRYLETLSVHGNNFTIMDDLNSETGFFSSLSKCRHLKTLILSENPLRMKLPNSIGNLSDSLQMLMIDFCGVYGNIPSEIGNLSNLFEISFAGNVLNGSIPATISNLQALQHLNLVGNELDGFIVDELCDIRTLAYLYLSRNKLSGAIPPCLGNLMSLRRLYLGGNKLISDIPSSFWNLTGILEVNLSSNMLVGNLSFKIGNMKALIRLDLSRNHISGTIPSTIGSLPNLQNVSLADNILQGTIPESLGNLLSLVKLDLSQNNLSGEIPKSLESLTSLKYVNLSDNRLQGEIPSGGVFKDLTAESFMMNKALCGEPKMQVPPCRKEQRKRSKAKWILLKYILPMVLSAILVLSGIILFRRKRRNSRHTIVKQDLSTLGMPRRISYFEILDATNKFDESNLLGSGSFGSVFKGRLSNGIMVAFKIFNSDSEAMSKSFEVECDTMRNVRHRNLVKIISSCSSDDFKCLIMEFIPNGSLEKWLYSHNYCLDFLRRLNIMINIASALEYLHHGLPTQIVHCDLKPSNILLDDNMVAHVSDFGIAKFLDKGKSRTLTETIPTIGYVAPEYGSLGIVSAKVDVYSFGIILIEVFTRKRPTEDMFVDGLNLNSWVSESMSHSLTQVIDCNLLKGDHGEQYMANILTSTSSILQLALNCCANFSQRRCNMSEVVVSLNKIKDMFVQSRHLKKY 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3281g00011 1159 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 504 801 - -
Pral3281g00011 1159 Pfam Protein kinase domain 870 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00011 1159 SUPERFAMILY L domain-like 54 238 - -
Pral3281g00011 1159 Gene3D Ribonuclease Inhibitor 427 495 IPR032675 -
Pral3281g00011 1159 Gene3D Ribonuclease Inhibitor 24 183 IPR032675 -
Pral3281g00011 1159 Pfam Leucine Rich Repeat 142 163 IPR001611 GO:0005515
Pral3281g00011 1159 Pfam Leucine Rich Repeat 262 283 IPR001611 GO:0005515
Pral3281g00011 1159 Pfam Leucine Rich Repeat 117 139 IPR001611 GO:0005515
Pral3281g00011 1159 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Pral3281g00011 1159 SMART LRR_sd22_2 428 454 - -
Pral3281g00011 1159 SMART LRR_sd22_2 629 648 - -
Pral3281g00011 1159 SMART LRR_sd22_2 725 751 - -
Pral3281g00011 1159 SMART LRR_sd22_2 235 261 - -
Pral3281g00011 1159 SMART LRR_sd22_2 187 213 - -
Pral3281g00011 1159 SMART LRR_sd22_2 379 405 - -
Pral3281g00011 1159 SMART LRR_sd22_2 476 497 - -
Pral3281g00011 1159 SMART LRR_sd22_2 163 184 - -
Pral3281g00011 1159 SMART LRR_sd22_2 331 357 - -
Pral3281g00011 1159 SMART LRR_sd22_2 91 114 - -
Pral3281g00011 1159 SMART LRR_sd22_2 557 583 - -
Pral3281g00011 1159 Pfam Leucine rich repeat 189 248 IPR001611 GO:0005515
Pral3281g00011 1159 Pfam Leucine rich repeat 606 666 IPR001611 GO:0005515
Pral3281g00011 1159 Pfam Leucine rich repeat 429 489 IPR001611 GO:0005515
Pral3281g00011 1159 Pfam Leucine rich repeat 702 762 IPR001611 GO:0005515
Pral3281g00011 1159 Pfam Leucine rich repeat 309 368 IPR001611 GO:0005515
Pral3281g00011 1159 Gene3D Transferase(Phosphotransferase) domain 1 945 1157 - -
Pral3281g00011 1159 SUPERFAMILY Protein kinase-like (PK-like) 850 1143 IPR011009 -
Pral3281g00011 1159 Gene3D Ribonuclease Inhibitor 496 806 IPR032675 -
Pral3281g00011 1159 Gene3D Ribonuclease Inhibitor 193 347 IPR032675 -
Pral3281g00011 1159 ProSitePatterns Protein kinases ATP-binding region signature. 875 897 IPR017441 GO:0005524
Pral3281g00011 1159 SMART serkin_6 869 1150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00011 1159 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 301 396 - -
Pral3281g00011 1159 Gene3D Phosphorylase Kinase; domain 1 852 944 - -
Pral3281g00011 1159 ProSiteProfiles Leucine-rich repeat profile. 727 750 IPR001611 GO:0005515
Pral3281g00011 1159 SUPERFAMILY RNI-like 181 521 - -
Pral3281g00011 1159 ProSiteProfiles Protein kinase domain profile. 869 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00011 1159 Gene3D Ribonuclease Inhibitor 348 426 IPR032675 -
Pral3281g00011 1159 SUPERFAMILY L domain-like 503 790 - -
Pral3281g00011 1159 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 945 1155 - -
Pral3281g00011 1159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 988 1000 IPR008271 GO:0004672|GO:0006468
Pral3281g00011 1159 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 429 1145 - -
Pral3281g00011 1159 FunFam Serine-threonine protein kinase plant-type 849 944 - -
Pral3281g00011 1159 FunFam Leucine-rich repeat receptor protein kinase EMS1 397 493 - -
Pral3281g00011 1159 SMART LRR_typ_2 259 283 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 163 187 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 677 701 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 629 652 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 331 354 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 235 258 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 725 748 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 91 114 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 355 378 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 379 403 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 307 330 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 115 139 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 749 774 IPR003591 -
Pral3281g00011 1159 SMART LRR_typ_2 428 452 IPR003591 -
Pral3281g00011 1159 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 184 - -
Pral3281g00011 1159 ProSiteProfiles Leucine-rich repeat profile. 261 283 IPR001611 GO:0005515
Pral3281g00011 1159 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 205 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3281g00011 Pral-Chr3281 277396 289650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3281g00011 4 1147 Receptor kinase-like Gene Family AT5G46330 35.294 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3281g00011 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3281g00011 - K13420 qsa:O6P43_031966 1113.6