Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3281g00010 ATGGGAAGCCTCATCTTTCATTTCTGCTCCATCTCCTCCATGGTTTATCTCATGGCTTACCCAGGTTTATGTCAGTCCAATTTCACTTATTCCGATGAATTGGCTCTTCTTGCTTTCAAATCTTCTGTCAGGGATACTTACAATCACTTGCAAAACTGGTCCAATTCGTCTACCATGTGCAATTGGTCTGGGGTTACATGTGACTCTAAGCATGAGAGAGTTAGAATACTGAGTCTTGCAAAGATGGGTCTCAGTGGAAGCTTACCCTCACAGATCGGCAATTTGTCCTTCCTAGTAAAACTTGATCTCAACAGTAACAGATTGTATGGTAAGTTGCCAAAAGAGTTGCTTCAGTTGCAGAGGTTAGAAATTCTGAACTTGAGCTATAATTCACTCAGTGGAGAAATCCCAAGTTGGATAGGAAGCTTATTTACACTTCAACACTTGATTCTTGGCAATAATAGCTTTGGGGGTATCATCCCTCCAAGTATATCCAATTTGTCTAAGTTAGAGACTTTGGATTTGAATTCTAATTCTCTCCAAGGATCTATTCCGTTTGATATTGGAAGGCTTCAAAATCTGAAAATTTTACGACTTTCTGTGAACGAGCTTTCAGGAAATATGCCTCCATCTATTTCCAACATGTCCTCACTTGAATGGATCTCTTTGTCTCTTAACCTCTTAAAAGGGCATATTCCCGTAATGGATAAGCTTACCAAGCTGAAACTAATATATTTGGAAGTTAATAAGTTGACTGGTCAAATACCAAGAAGTATTGGAAACTTGATCATGCTTCAAGAATTATATCTTTCAAACAATAACTTAAAAGGAGATATTCCCAAGGAAATTAGCAATCTTACAAATGCGAATAAAATATACTTGAATGATAATCAATTGTCTGGTTACATACCAAAAAGTATTGGAAAATTGACCATGCTTCAAGAGTTATCCCTTGCCAACAATGACTTAGAAGGAAATATTCCCAATGAAATTAGAGGCCTTACAAATCTGAAAATTATGGACCTGTCAGTTAATCAACTATTTGGCCACATACCAAGAGGCATTGGAAACTTGACTATGCTTCAAGATTTATATCTTGGAAGCAATAATTTTGAAGGCTCAATACCTATGGAAATAGGAAATCTTCAACAACTTGAGAAGTTATTGTTGTCTGGAAACAACTTAAGTGAATTTATTCCATCAGAAATTTTCAACATCTCAACTTTGAAAGTCTTGTCTCTCTCAAACAATTCTCTATCAGGAAGTCTTCCATCTGATTTTGGATATGGCTTTTCTAATCTACAAGAGTTGTATTTATGGGGCAACAAACTTTCCGGAAAAATCCCAAATAGTATATCCAATGCTTCTAAGCTAACCATTCTAGAATTGGAGCACAATAATTTTGAAGGGGTTTTACCAAGCACACTTGGGCATTTAAGATACTTGGAATCTCTTTGGGTGCATTATAACAATTTCACCATAATAGATAATTCAAATTCTGAAACTAGCTTTTTTAGCTCATTGTCAAATTGTAGACATTTGAAAACTCTTATTCTCTCAAACAATCCATTGCATACGAAACTCCCCAAGTCCATAGGAAATTTGTCTGATTCTCTACAGACGCTGATGATAGACTTCTGCGGGCTTAATGGAAACATACCATCAGAAATTGGGAATCTGTCCAACTTGTTCAAGCTATCTTTGGCTGAAAATGCTTTAAATGGACCAATTCCAACAACAATTGGCAACTTACAGGCTCTTCAGCATTTAAGTCTTGTAGGCAATGAGCTAGATGGTTTGATTATTGATGAGCTTTGCAAAATTAGAAGACTTGTGTATTTATATCTCTCTCGAAACAAGTTTTCTGGAGCAATCCCGTCTTGCCTAGGAAATCTCATGTCCCTGCAAGCGCTTTACTTGGGCGCCAATAAGTTGATTTCTGGGATACCTTCTTCCTTTTGGAATTTAACAGGTATATTGAAAGTAAACCTATCTTCCAACATGCTAGTTGGAAATCTTTCATTCAAGATTGGGAACATGAAAGCTCTCGTGATATTAGAATTGTCAAGAAATCATATTTCAGGCGTCATTCCGACAAACATAGGTAGCTTGCAAAATTTGCAAAATTTCTCCTTAGCAGATAACCTATTGCAAGGGACGATTCCGGAATCACTTGGGAATTTGCTAAGCTTAGTAAAGCTAGACCTTTCCCAAAATAATTTGTCTGGTGAGATTCCTAAATCACTTGAGTCACTTACATCCCTTAAGTATGTTAATCTCTCTTATAACGAGCTACAAGGTGAGATTCCAAGTGGCGGGGTCTTCAAAGATTTGAAGGCTGAATTTTTCATGATGAATAAAGCACTTTGTGGTGAGCCAAAAATGCAAGTGCCTCCATGTAGAAAAGAACAAAGAAAGAGGTCAAAGGCAAAATTGATTTTATTGAAATACTTATTACCCATGGTTCTGTCAGCAATTTTAGTTGTTTCAGGCATTCTCCTCTTTCAACGCAAACGAAGGAATTCTAGGCATACCATAATGAAACAAGATTTACCAACTTTAGGAATGCCGAGAAGGATCTCGTATTTTGAAATTTTGGACGCAACCAACAGATTTGATGAGAGTAACTTACTAGGAAGTGGAAGTTTTGGTTCTGTATTCCAAGGAAGGCTTTCAGGTGGAATAATGGTTGCTGTTAAAATATTCAATTTTTATTCAGAAGCATTGTCTAAGAGCTTTGAAGTGGAATGTGACACAATGCGTAATGTGCGTCATCGTAATTTGGTGAAGATTATTAGTAGTTGTTCCAGTGATGACTTCAAGTGTTTGATAATGGAGTTCATTCCCAATGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTGGATTTTCTGCAAAGGTTAAATATAATAATAAACATCGCATCTGCTTTGGAATATCTCCATCATGGCTTGTCAACACCGATAGTCCACTGTGATTTGAAGCCAAGCAATATTTTGTTGGATGATGACATGGTTGCTCATGTCACTGACTTTGGAATTGCAAAATTTTTAGATGAAGGGAAATCTAGGACACTCACGGAGACAATACCTACAATTGGTTATGTTGCACCAGAATATGGATCTCTTGGAATTGTTTCAACAAAAGTAGATGTGTACAGCTTCGGAATAATACTAATGGAAGTATTCACAAGAAAAAGGCCATCAGAAGACATATTTGTGGATGGGTTGAACTTAAAGAGTTGGCGGACAGGCAGTGAACAGGCAGCGGGCTTGAGACTGGTTTCGCAGATCAGCCGACAACATCTGGCTCCTCACAGTGGAAGGATCACAGACTGCTGCTCTCCCAGCCCACAATGCCTGCAAGTTTTTCTCATAGTTTCATTTCAATTTGTAGTGTTGGTGCTCTTTGGAATTATTCCAGCTACAATGTCCTTGGCTGATAGGTACTCAAATTCGAATTTAGATTCATTTCTACCTGTGAAACTACCTGAGTTAGTTCCCGAAGGGAAGATCACTCTATTGCTGATTCTTGGAGGTGCTGGATACGTTGTTCTTTGTGAATTGCTTGAGAACTTTCAGAGCCTTCAAAAGATTTAA 3606 0.3749 MGSLIFHFCSISSMVYLMAYPGLCQSNFTYSDELALLAFKSSVRDTYNHLQNWSNSSTMCNWSGVTCDSKHERVRILSLAKMGLSGSLPSQIGNLSFLVKLDLNSNRLYGKLPKELLQLQRLEILNLSYNSLSGEIPSWIGSLFTLQHLILGNNSFGGIIPPSISNLSKLETLDLNSNSLQGSIPFDIGRLQNLKILRLSVNELSGNMPPSISNMSSLEWISLSLNLLKGHIPVMDKLTKLKLIYLEVNKLTGQIPRSIGNLIMLQELYLSNNNLKGDIPKEISNLTNANKIYLNDNQLSGYIPKSIGKLTMLQELSLANNDLEGNIPNEIRGLTNLKIMDLSVNQLFGHIPRGIGNLTMLQDLYLGSNNFEGSIPMEIGNLQQLEKLLLSGNNLSEFIPSEIFNISTLKVLSLSNNSLSGSLPSDFGYGFSNLQELYLWGNKLSGKIPNSISNASKLTILELEHNNFEGVLPSTLGHLRYLESLWVHYNNFTIIDNSNSETSFFSSLSNCRHLKTLILSNNPLHTKLPKSIGNLSDSLQTLMIDFCGLNGNIPSEIGNLSNLFKLSLAENALNGPIPTTIGNLQALQHLSLVGNELDGLIIDELCKIRRLVYLYLSRNKFSGAIPSCLGNLMSLQALYLGANKLISGIPSSFWNLTGILKVNLSSNMLVGNLSFKIGNMKALVILELSRNHISGVIPTNIGSLQNLQNFSLADNLLQGTIPESLGNLLSLVKLDLSQNNLSGEIPKSLESLTSLKYVNLSYNELQGEIPSGGVFKDLKAEFFMMNKALCGEPKMQVPPCRKEQRKRSKAKLILLKYLLPMVLSAILVVSGILLFQRKRRNSRHTIMKQDLPTLGMPRRISYFEILDATNRFDESNLLGSGSFGSVFQGRLSGGIMVAVKIFNFYSEALSKSFEVECDTMRNVRHRNLVKIISSCSSDDFKCLIMEFIPNGSLEKWLYSHNYCLDFLQRLNIIINIASALEYLHHGLSTPIVHCDLKPSNILLDDDMVAHVTDFGIAKFLDEGKSRTLTETIPTIGYVAPEYGSLGIVSTKVDVYSFGIILMEVFTRKRPSEDIFVDGLNLKSWRTGSEQAAGLRLVSQISRQHLAPHSGRITDCCSPSPQCLQVFLIVSFQFVVLVLFGIIPATMSLADRYSNSNLDSFLPVKLPELVPEGKITLLLILGGAGYVVLCELLENFQSLQKI 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3281g00010 1201 FunFam Leucine-rich repeat receptor-like kinase 33 139 - -
Pral3281g00010 1201 ProSiteProfiles Leucine-rich repeat profile. 730 753 IPR001611 GO:0005515
Pral3281g00010 1201 Pfam Leucine rich repeat 609 669 IPR001611 GO:0005515
Pral3281g00010 1201 Pfam Leucine rich repeat 706 765 IPR001611 GO:0005515
Pral3281g00010 1201 Pfam Leucine rich repeat 265 323 IPR001611 GO:0005515
Pral3281g00010 1201 Pfam Leucine rich repeat 384 444 IPR001611 GO:0005515
Pral3281g00010 1201 Pfam Leucine Rich Repeat 121 143 IPR001611 GO:0005515
Pral3281g00010 1201 Pfam Leucine Rich Repeat 146 167 IPR001611 GO:0005515
Pral3281g00010 1201 Gene3D Ribonuclease Inhibitor 31 142 IPR032675 -
Pral3281g00010 1201 ProSiteProfiles Protein kinase domain profile. 872 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00010 1201 Gene3D Ribonuclease Inhibitor 327 425 IPR032675 -
Pral3281g00010 1201 Gene3D Phosphorylase Kinase; domain 1 855 947 - -
Pral3281g00010 1201 SMART LRR_sd22_2 511 537 - -
Pral3281g00010 1201 SMART LRR_sd22_2 632 651 - -
Pral3281g00010 1201 SMART LRR_sd22_2 704 727 - -
Pral3281g00010 1201 SMART LRR_sd22_2 167 188 - -
Pral3281g00010 1201 SMART LRR_sd22_2 191 217 - -
Pral3281g00010 1201 SMART LRR_sd22_2 262 288 - -
Pral3281g00010 1201 SMART LRR_sd22_2 310 336 - -
Pral3281g00010 1201 SMART LRR_sd22_2 560 586 - -
Pral3281g00010 1201 SMART LRR_sd22_2 431 457 - -
Pral3281g00010 1201 SMART LRR_sd22_2 382 408 - -
Pral3281g00010 1201 SMART LRR_sd22_2 728 754 - -
Pral3281g00010 1201 SMART LRR_sd22_2 479 500 - -
Pral3281g00010 1201 Gene3D Ribonuclease Inhibitor 426 497 IPR032675 -
Pral3281g00010 1201 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 140 232 - -
Pral3281g00010 1201 ProSitePatterns Serine/Threonine protein kinases active-site signature. 991 1003 IPR008271 GO:0004672|GO:0006468
Pral3281g00010 1201 SMART LRR_typ_2 310 333 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 431 455 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 728 751 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 262 286 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 632 655 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 382 406 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 167 191 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 334 358 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 752 777 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 119 143 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 680 704 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 511 535 IPR003591 -
Pral3281g00010 1201 SMART LRR_typ_2 456 478 IPR003591 -
Pral3281g00010 1201 FunFam Os07g0541700 protein 948 1035 - -
Pral3281g00010 1201 Gene3D Ribonuclease Inhibitor 498 809 IPR032675 -
Pral3281g00010 1201 FunFam Serine-threonine protein kinase plant-type 853 947 - -
Pral3281g00010 1201 SMART serkin_6 872 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00010 1201 PANTHER LEUCINE RICH REPEAT KINASE 2 503 1122 - -
Pral3281g00010 1201 Gene3D Ribonuclease Inhibitor 236 326 IPR032675 -
Pral3281g00010 1201 SUPERFAMILY L domain-like 538 793 - -
Pral3281g00010 1201 ProSitePatterns Protein kinases ATP-binding region signature. 878 900 IPR017441 GO:0005524
Pral3281g00010 1201 FunFam Leucine-rich repeat receptor-like protein kinase TDR 234 498 - -
Pral3281g00010 1201 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Pral3281g00010 1201 Gene3D Ribonuclease Inhibitor 143 235 IPR032675 -
Pral3281g00010 1201 SUPERFAMILY L domain-like 54 352 - -
Pral3281g00010 1201 SUPERFAMILY Protein kinase-like (PK-like) 853 1074 IPR011009 -
Pral3281g00010 1201 SUPERFAMILY L domain-like 279 495 - -
Pral3281g00010 1201 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 507 804 - -
Pral3281g00010 1201 Pfam Protein kinase domain 873 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00010 1201 Gene3D Transferase(Phosphotransferase) domain 1 948 1124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3281g00010 Pral-Chr3281 250398 262212 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3281g00010 22 1071 Receptor kinase-like Gene Family AT5G46330 35.975 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3281g00010 Pkinase 7.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3281g00010 - K13420 qsa:O6P43_031966 1095.11