Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3281g00008 ATGGGAAACTTATTTACGCTTCAACACTTGATTCTTGGCAATAATAGCTTTGGAGGCATCATTCCTAAAAGTATATCCAATTTGTCTAGGTTGGAGACCTTGGATTTGAATTCTAATTCTCTCCAAGGATCTATTCCATTTGATATTGGAAGACTTCAACATCTAAAAATTTTACGCCTTTCTGTAAACAAGCTTTCAGGAATTATGCCTCCATCTATTTCCAACATTTCCTCACTTGAGCGGCTCATTCTGTCTCTCAACCTCTTACAAGGATATATTCCCATAGAAATGAATAAGCTTACAAAGCTGAAAATTATATACTTGGGAGGGAATAAGTTGACTGGCCAAATACCAAGAAGTATTGGTAACTTTATCATGCTTCAAGAGCTATCTCTTTCAAACAATAACTTACAAGGAGGTATTCCCAACGAAATTAGCAATCTTACAAATGTGAAGAATATATATCTCGATAACAACCAATTGTCTGGTCACATACCAAAAAGCATTGGAAAATTGACCACGCTTCAAGAGTTATCTCTTGCCAACAACTTCTTTGAAGGAATTATTCCTAATGAAATTAGAAGCCTTACAAATCTGAAAATAATGGACCTATCAGCTAATCAACTATTTGGCTACATACCAAGAGGCATTGAAAACTTGACTATGCTTCAAAATTTGAACCTTGAAAACAATAATTTAGAAGGCTCAATACCTTTGGAAATAGGCAATCTTCAACAACTTGAGACATTATTGTTGTCTCAAAACAAATTGAGCGAATATATTCCGTCAGAAATATTCAACATCTCAACTTTGAAAGTCTTGTCTCTCTACGACAACTCTCTAGCAGGAAGTCTTCCATCAGATTTCGGATATGGCCTTTCTAATCTACAAGAGTTGTATTTATGGGGCAACAAACTTTCTGGAAGAATCCCAAGTACTATATCCAATGCTTCTAAGTTAACCATTCTAGAATTGGAGCAAAATAATTTTGGAGGGGTTTTACCAAGCACACTTGGTCATTTAAGATACTTAGAAGCCCTTTCGGTGCATGATAACAATTTCACCATAATAGATGATTCAAATTCTGAAACTGGCTTTTTTAGCTCGTTGTCAAAATGTAGACATTTGAAAACTCTAATTCTCTCAAAGAATCCATTGCACATGAAACTTCCCAACTCCATTGGAAACTTATCTGATTCTTTACAGATGCTGATGATCGACTTATGCGGGATTAATGGTAACATACCATCAGAAATTGGGTATCTGTCCAACTTGTTTAAGATATCTTTTGCTGGAAATGTTTTAAATGGATCAATTCCAACAACAATTGGCAACTTACAGGCTCTTCAGCATTTGAATCTTGCGGGTAATGAGTTAGATGGTTTCATTGTAGATGAGCTTTGTGATATTAGAAGGCTTGCATATTTATATCTATCTCGAAACAAGCTTTCTGGAGCAATGCCCCCTTGCTTAGGAAACCTTATATCCCTACAAGGACTTTACTTGGGCGGCAATAAGTTGAGTTCCGAGATACCTTCTTCCTTTTGGAACTTGATGGGTGTATTGGAAGTAAACCTATCTTCCAACATGTTAGCTGGAAATCTTTCATTCAAGATTAGGAACATGAAAGCTCTTATTCGATTAGACTTGTCAAGAAATAATATTTCAGGCACCATTCCATCAACCATAGGCAGCTTGCAGAATTTGCAAAATGTCTCCTTAGCAAATAACATATTGCAAGGGACGATTCCAGAATCACTTGGAAATTTGCTGAGCTTAGTAAAGCTAGACCTATCCCAAAATAATTTGTCTGGTGAGATTCCTAAATCACTAGAGCCACTTACATCCCTTAAGTATGTTAATCTCTCTTATAACAGACTACAAGGTGAGATTCCTAGTGGTGGGGTCTTCAAAGATTTGACGGCTGAATCTTTCATGATGAATAAAGCACTTTGTGGTGAGCCAAAAATGCAAGTTCCTCCATGCAGAAAAGAACAAAGAAAGAGGTCAAAGGCAAAATGGATTTTGTTGAAATACATACTACCCCTGGTTTTGTCAGCAATTTTAGTCCTTTCAGGCATTGTCCTCTTTCAGCGTAAACGAATGAATTCTAGGCATACCATAATGAAACAAGATTTATCAACTTTAGGAATGCCAAGAAGGATTTCGTATTTTGAAATTTTGGATGCAACCAACAGATTTGATGAGAGTAACTTATTAGGAAGTGGAAGTTTTGGTTCTGTATTCAAAGGAAGGCTTTCAAATGGAATAATAGTTGCTTTTAAAGTATTCAATTTTGATTCAGAAGCTATGTCAAAGAGCTTTGAAGTGGAATGTGACACACTGCGTAATGTGCGTCACCGCAATTTGGTGAAGATCATTAGTAGTTGTTCCAGTGATGACTTCAAGTGTTTGATAATGGAGTTCATTCCCAATGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTGGATTTTCTGCAACGGTTAAATATAATGATAAACATCGCATCTGCTTTGGAATATATCCATCACGGCTTGTCAACACCGATAGTCCACTGTGATTTGAAACCAAGCAATATTTTGTTGGATGATGACATGGTTGCTCATGTTAGTGACTTTGGAATTGCAAAATTTTTAGATGAAGGGAAATCTAGGACACTCACAGAGACAATACCTACAATTGGTTATGTTGCCCCCGAATATGGGTCTCTTGGAATTGTTTCAACAAAAGTTGATGTGTACAGCTTCGGAATAATATTAATAGAAGTATTCACAAGAAAAAGGCCAACAGAAGATATGTTTGTGGGTGGATTGGACTTGAAGAGCTGGGTAAGTGAATCAATGTCTCATTCACTAACTCAAGTCATAGATTCCAATTTATTACAAGACGATGATGAACAATATATTGCTAATATTTTGACAACTGCATCCACTATTCTTGAGTTGGCCCTGAACTGTTGTGCCAATTTTTCACAAAGGCGTTGCAATATGTCAGAGGTTGTGGTATCATTAAACAAGATCAAGGACATGTTTATTCAAACATGTTATTTAAAGAAATATTGA 3072 0.3613 MGNLFTLQHLILGNNSFGGIIPKSISNLSRLETLDLNSNSLQGSIPFDIGRLQHLKILRLSVNKLSGIMPPSISNISSLERLILSLNLLQGYIPIEMNKLTKLKIIYLGGNKLTGQIPRSIGNFIMLQELSLSNNNLQGGIPNEISNLTNVKNIYLDNNQLSGHIPKSIGKLTTLQELSLANNFFEGIIPNEIRSLTNLKIMDLSANQLFGYIPRGIENLTMLQNLNLENNNLEGSIPLEIGNLQQLETLLLSQNKLSEYIPSEIFNISTLKVLSLYDNSLAGSLPSDFGYGLSNLQELYLWGNKLSGRIPSTISNASKLTILELEQNNFGGVLPSTLGHLRYLEALSVHDNNFTIIDDSNSETGFFSSLSKCRHLKTLILSKNPLHMKLPNSIGNLSDSLQMLMIDLCGINGNIPSEIGYLSNLFKISFAGNVLNGSIPTTIGNLQALQHLNLAGNELDGFIVDELCDIRRLAYLYLSRNKLSGAMPPCLGNLISLQGLYLGGNKLSSEIPSSFWNLMGVLEVNLSSNMLAGNLSFKIRNMKALIRLDLSRNNISGTIPSTIGSLQNLQNVSLANNILQGTIPESLGNLLSLVKLDLSQNNLSGEIPKSLEPLTSLKYVNLSYNRLQGEIPSGGVFKDLTAESFMMNKALCGEPKMQVPPCRKEQRKRSKAKWILLKYILPLVLSAILVLSGIVLFQRKRMNSRHTIMKQDLSTLGMPRRISYFEILDATNRFDESNLLGSGSFGSVFKGRLSNGIIVAFKVFNFDSEAMSKSFEVECDTLRNVRHRNLVKIISSCSSDDFKCLIMEFIPNGSLEKWLYSHNYCLDFLQRLNIMINIASALEYIHHGLSTPIVHCDLKPSNILLDDDMVAHVSDFGIAKFLDEGKSRTLTETIPTIGYVAPEYGSLGIVSTKVDVYSFGIILIEVFTRKRPTEDMFVGGLDLKSWVSESMSHSLTQVIDSNLLQDDDEQYIANILTTASTILELALNCCANFSQRRCNMSEVVVSLNKIKDMFIQTCYLKKY 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3281g00008 1023 SMART serkin_6 734 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00008 1023 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 369 666 - -
Pral3281g00008 1023 SUPERFAMILY L domain-like 401 655 - -
Pral3281g00008 1023 FunFam Leucine-rich repeat receptor protein kinase EMS1 261 359 - -
Pral3281g00008 1023 Pfam Leucine Rich Repeat 7 28 IPR001611 GO:0005515
Pral3281g00008 1023 Pfam Leucine Rich Repeat 127 148 IPR001611 GO:0005515
Pral3281g00008 1023 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 238 - -
Pral3281g00008 1023 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 810 1019 - -
Pral3281g00008 1023 Gene3D Ribonuclease Inhibitor 94 146 IPR032675 -
Pral3281g00008 1023 FunFam Serine-threonine protein kinase plant-type 714 809 - -
Pral3281g00008 1023 Gene3D Ribonuclease Inhibitor 147 219 IPR032675 -
Pral3281g00008 1023 ProSiteProfiles Protein kinase domain profile. 734 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00008 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 853 865 IPR008271 GO:0004672|GO:0006468
Pral3281g00008 1023 Pfam Protein kinase domain 735 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00008 1023 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 362 1008 - -
Pral3281g00008 1023 SUPERFAMILY RNI-like 2 307 - -
Pral3281g00008 1023 Gene3D Phosphorylase Kinase; domain 1 717 809 - -
Pral3281g00008 1023 SUPERFAMILY Protein kinase-like (PK-like) 715 1007 IPR011009 -
Pral3281g00008 1023 Gene3D Ribonuclease Inhibitor 1 93 IPR032675 -
Pral3281g00008 1023 Pfam Leucine rich repeat 54 113 IPR001611 GO:0005515
Pral3281g00008 1023 Pfam Leucine rich repeat 174 233 IPR001611 GO:0005515
Pral3281g00008 1023 Pfam Leucine rich repeat 294 354 IPR001611 GO:0005515
Pral3281g00008 1023 Pfam Leucine rich repeat 471 531 IPR001611 GO:0005515
Pral3281g00008 1023 Pfam Leucine rich repeat 568 627 IPR001611 GO:0005515
Pral3281g00008 1023 Gene3D Ribonuclease Inhibitor 220 359 IPR032675 -
Pral3281g00008 1023 Gene3D Ribonuclease Inhibitor 360 671 IPR032675 -
Pral3281g00008 1023 SMART LRR_typ_2 590 613 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 28 52 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 614 639 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 494 517 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 148 172 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 196 219 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 220 243 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 542 566 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 446 470 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 244 268 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 293 317 IPR003591 -
Pral3281g00008 1023 SMART LRR_typ_2 100 124 IPR003591 -
Pral3281g00008 1023 ProSitePatterns Protein kinases ATP-binding region signature. 740 762 IPR017441 GO:0005524
Pral3281g00008 1023 Gene3D Transferase(Phosphotransferase) domain 1 810 1018 - -
Pral3281g00008 1023 SMART LRR_sd22_2 422 448 - -
Pral3281g00008 1023 SMART LRR_sd22_2 148 174 - -
Pral3281g00008 1023 SMART LRR_sd22_2 542 571 - -
Pral3281g00008 1023 SMART LRR_sd22_2 590 616 - -
Pral3281g00008 1023 SMART LRR_sd22_2 293 319 - -
Pral3281g00008 1023 SMART LRR_sd22_2 52 78 - -
Pral3281g00008 1023 SMART LRR_sd22_2 100 126 - -
Pral3281g00008 1023 SMART LRR_sd22_2 196 222 - -
Pral3281g00008 1023 SMART LRR_sd22_2 244 270 - -
Pral3281g00008 1023 SMART LRR_sd22_2 28 49 - -
Pral3281g00008 1023 SUPERFAMILY L domain-like 285 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3281g00008 Pral-Chr3281 199501 209276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3281g00008 319 633 Receptor kinase-like Gene Family AT3G47570 30.295 6.96e-33 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3281g00008 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3281g00008 - K13420 qsa:O6P43_031966 1029.24