Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3281g00007 ATGGGAAACCTTATCTTTCATTTCTCCTTCATGCTCTTCATGCTTTATCTCATGGTTTGCCCATCTTTATGTCACTCCAATTTTTCTTGCGATGAATTGGCGCTTTTGGCTCTCAAATCTTCTGTTAGGGATCCTTACCATCGCTTGGAAAACTGGTCCAGTTCCTCTTCCATATGCAATTGGTCTGGGGTTACATGTGATTCTAGGCATAAGAGAGTTAGAATACTGAGTCTTGCTAAAATGGATCTCAACGGCACCTTACCGTCGCAGCTTGGCGATATGTCCTTCCTTGTAAAACTTGATCTCAACAGCAACAATTTGTATGGTAAGTTGCCAAAAGAGTTGTTTCAGTTGCAGAGGTTAGAAATTCTGAACCTAAGCTATAATGCATTCAGTGGAGAAATCCCAAGTTGGATAGGAAGCTTATTTAATCTTCAACACTTGATTCTTGGCAATAATAGTTTTGGAAGTATCATTCCTCCAAGTATATCCAATTTGTCTATGTTGGAGACCTTGGATTTGAGCTCTAATTCTCTCCAAGGATCTATTCCGTTTCATATTGGAAGGCTTCAGCATCTCAAAACTTTGCGCCTTTCTGTGAACAAGCTTTCAGGAATCATACCTCCACCTATTTCTAATATATCCTCACTTGAGCGCATCTCTCTGTCTGTCAACGTCCTACAAGGACCTATTCCCATAGAAATGAATAAGCTCACAAAGCTGAAAATTATATACTTGGAAGATAATAAGTTGACTGGCCAAATACCAAGAAGAGATATTCCCAAGGAAATTAGCAATCTTACAAATGCTAACAAAATATACTTGGATAACAATCACTTGTCTGGTCACATACCAAAAGGCATTGGAAAATTGACTATGCTTCAAGAGCTATCTCTTGCCAACAATAACTTTGAAGGAAATATTCCCATTGAAATTAGAAGCCTTACAAATCTGAAAATTATAGACCTGTCAGTTAATCAACTATTTGGCCATATACCAAGAGGCATTGGAAACTTGACTATGCTTCAAGATTTAAATCTTGAAATCAATAATTTGGAAGGTTCAATACCTATGGAAATAGGCAATCTTCAACAACTTGAAACGTTATTATTATCTCAAAACAAGTTGAACAAGTCTATTCCATCAGAAATTTTCAACATCTCAGCTTTGAAAGTCTTGTCTCTCTCAAACAATTCTCTATCAGGAAGTCTTCCATCAGATTTTGGATATGGCCTTCTTAATCTACAGAGTTTATATTTATGGGGCAACAAACTATCTGGAAGGATCCCAAATACTATATCCAATGCTTCCAAGTTAACCATTCTAGAATTAGAGCAAAATAATTTTGAAGGGGTTTTGCCAAGCACAATTGGGCATTTAAGATACTTAGAAAATCTGTGGGTGCATGATAACAATTTCTCCATAATAGATGATGATTCAAATTCTGAAACTGGCTTTTTTAGCTCGTTGTCAAATTGTAGACATTTGAAAACCCTAATTCTCTCAAAGAATCCATTGCAAATGAAACTTCCCAAGTCCATTGGAAATTTGTCTGATTCTCTACAGACACTGATGATTGACTTCTGCGGGATTAATGGTAGCATACCATTAGAAATTGGGAACCTGTCCAACTTGGTTCAACTATCTTTTGCTGGAAATGTTTTAAATGGATCAATTCCAACAACAATTAGCAACTTACAGGATCTTCAGTATTTGAATCTTGTGGGCAATGAGCTAGATGGCTTGATTGTTGATGAGCTTTGTGACGTTAGAACAATTGCATACTTATATTTATCTCAAAACAAATTTTCTGGAGCAGTGCCTTCTTGCTTAGGAAATCTTATGTCCCTGCGGGAGCTTTATTTGGGCTCCAATAAGTTGATCTCCGAGATACCTTCTTCCTTTTGGAATTTAACAGGCATATTGAAAGTAACCTATCTTCCAACAAGCACCATTCCGACGACCATTGGTGGCTTGCAAAATTTGGAAGTTTTCTCCTTAGCACATAACATAATGCGAGGGACGATTCCGCGATCACTTGGGGATTTGCTAAGCTTAGTAAATCTAGACCTTTCCCAAAATAACTTGTCTGGTGAGATTCCTAAATCACTAGAGTCAATTACGTCCCTTAAGTTTGTCAACCTCTCATATAACGAACTACAAGGTGAGATCCCAAGTGACAGGGTCTTCAAAGATTTGACAGCTGAATCTTTCATGGTGAATAAAGCACTTTGTGGTGAGCCAAAAATGCAAGTGCCTACATGCAGAAAAGAGGAAAGAAAAAGGTCAATAGCAAAACTGATTTTGCTGAAATTTATACTACCCATGGTTTTGTCAACACTTTTGGTTGTTTCAGGCATTATCCTCTTTCAATGTAAACGAATGAATTCTAGGAATACCATAATGAAACAAGAGTTATCAGCTTTGGGAATGCCTAGAAGGATTTCATATTTTGAAATTTTGGATGCAACCAACAAATTTGATGAGAGTAACTTACTGGGAAGTGGAAGTTTTGGTTCTGTATTTAAAGGAAGGCTTTCAAATGGAACAATGGTTGCTTTTAAAATATTCAATTTTGATTCAGAAGCATCGTCAAAGAGCTTTGAACTGGAATGTGACACAATGCGTAATGCACGTCACCGCAATTTGGTGAAGATCATAAGTAGTTGTTCCAATGTTGATTTCAAGTGTTTGGTAATGGAGTTCATTCCCAATGGGAGTCTTGAAAAATGGTTATATTCTCATAACTATAGTTTGGATTTTCTGCAAAGGTTGAATATAATGATAAATGTTGCATCTGCTTTGGAATATCTCCATCATAGCTTGCCAACACCAATAGTCCACTGTGATTTGAAGCCAAGAAACATTTTGTTGGATGATAACATGGTTGCTCATGTGAGTGACTTTGGAATTGCAAAATTTCTAGACAAAGGAAAGTCTAGGACACTCACAGAGACAATACCTACAATTGGTTATGTTGCACCAGAATATGGATCTCTTGGAATTGTCTCAACAAAAATTGATGTGTACAGCTTCGGAATAATACTAATGGAAGTATTCACAAGAAAAAGGCCAACAGAAGATATGTTTGTGGATGGCTTGAGCTTGAAGAGTTGGGAATCCATATTCTCAAGGTCTCAGAGAAGGTACTGA 3153 0.3708 MGNLIFHFSFMLFMLYLMVCPSLCHSNFSCDELALLALKSSVRDPYHRLENWSSSSSICNWSGVTCDSRHKRVRILSLAKMDLNGTLPSQLGDMSFLVKLDLNSNNLYGKLPKELFQLQRLEILNLSYNAFSGEIPSWIGSLFNLQHLILGNNSFGSIIPPSISNLSMLETLDLSSNSLQGSIPFHIGRLQHLKTLRLSVNKLSGIIPPPISNISSLERISLSVNVLQGPIPIEMNKLTKLKIIYLEDNKLTGQIPRRDIPKEISNLTNANKIYLDNNHLSGHIPKGIGKLTMLQELSLANNNFEGNIPIEIRSLTNLKIIDLSVNQLFGHIPRGIGNLTMLQDLNLEINNLEGSIPMEIGNLQQLETLLLSQNKLNKSIPSEIFNISALKVLSLSNNSLSGSLPSDFGYGLLNLQSLYLWGNKLSGRIPNTISNASKLTILELEQNNFEGVLPSTIGHLRYLENLWVHDNNFSIIDDDSNSETGFFSSLSNCRHLKTLILSKNPLQMKLPKSIGNLSDSLQTLMIDFCGINGSIPLEIGNLSNLVQLSFAGNVLNGSIPTTISNLQDLQYLNLVGNELDGLIVDELCDVRTIAYLYLSQNKFSGAVPSCLGNLMSLRELYLGSNKLISEIPSSFWNLTGILKVTYLPTSTIPTTIGGLQNLEVFSLAHNIMRGTIPRSLGDLLSLVNLDLSQNNLSGEIPKSLESITSLKFVNLSYNELQGEIPSDRVFKDLTAESFMVNKALCGEPKMQVPTCRKEERKRSIAKLILLKFILPMVLSTLLVVSGIILFQCKRMNSRNTIMKQELSALGMPRRISYFEILDATNKFDESNLLGSGSFGSVFKGRLSNGTMVAFKIFNFDSEASSKSFELECDTMRNARHRNLVKIISSCSNVDFKCLVMEFIPNGSLEKWLYSHNYSLDFLQRLNIMINVASALEYLHHSLPTPIVHCDLKPRNILLDDNMVAHVSDFGIAKFLDKGKSRTLTETIPTIGYVAPEYGSLGIVSTKIDVYSFGIILMEVFTRKRPTEDMFVDGLSLKSWESIFSRSQRRY 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3281g00007 1050 Gene3D Ribonuclease Inhibitor 177 334 IPR032675 -
Pral3281g00007 1050 SMART LRR_typ_2 291 314 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 166 190 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 94 118 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 614 637 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 460 483 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 142 165 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 542 566 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 363 387 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 412 436 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 388 411 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 238 267 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 315 339 IPR003591 -
Pral3281g00007 1050 SMART LRR_typ_2 683 707 IPR003591 -
Pral3281g00007 1050 Gene3D Ribonuclease Inhibitor 28 176 IPR032675 -
Pral3281g00007 1050 PRINTS Leucine-rich repeat signature 315 328 - -
Pral3281g00007 1050 PRINTS Leucine-rich repeat signature 169 182 - -
Pral3281g00007 1050 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 359 1040 - -
Pral3281g00007 1050 FunFam Leucine-rich repeat receptor-like protein kinase TDR 479 757 - -
Pral3281g00007 1050 ProSitePatterns Protein kinases ATP-binding region signature. 833 855 IPR017441 GO:0005524
Pral3281g00007 1050 Gene3D Transferase(Phosphotransferase) domain 1 903 1049 - -
Pral3281g00007 1050 ProSitePatterns Serine/Threonine protein kinases active-site signature. 946 958 IPR008271 GO:0004672|GO:0006468
Pral3281g00007 1050 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 258 476 - -
Pral3281g00007 1050 ProSiteProfiles Protein kinase domain profile. 827 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00007 1050 Pfam Leucine Rich Repeat 414 435 IPR001611 GO:0005515
Pral3281g00007 1050 Pfam Leucine Rich Repeat 616 638 IPR001611 GO:0005515
Pral3281g00007 1050 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Pral3281g00007 1050 SUPERFAMILY RNI-like 76 461 - -
Pral3281g00007 1050 Gene3D Ribonuclease Inhibitor 417 478 IPR032675 -
Pral3281g00007 1050 SMART serkin_6 827 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3281g00007 1050 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 186 257 - -
Pral3281g00007 1050 SUPERFAMILY L domain-like 487 730 - -
Pral3281g00007 1050 Gene3D Ribonuclease Inhibitor 479 764 IPR032675 -
Pral3281g00007 1050 Gene3D Ribonuclease Inhibitor 335 416 IPR032675 -
Pral3281g00007 1050 SUPERFAMILY Protein kinase-like (PK-like) 809 1031 IPR011009 -
Pral3281g00007 1050 Gene3D Phosphorylase Kinase; domain 1 810 902 - -
Pral3281g00007 1050 FunFam Serine-threonine protein kinase plant-type 808 902 - -
Pral3281g00007 1050 SMART LRR_sd22_2 412 438 - -
Pral3281g00007 1050 SMART LRR_sd22_2 166 187 - -
Pral3281g00007 1050 SMART LRR_sd22_2 363 389 - -
Pral3281g00007 1050 SMART LRR_sd22_2 460 481 - -
Pral3281g00007 1050 SMART LRR_sd22_2 238 269 - -
Pral3281g00007 1050 SMART LRR_sd22_2 315 341 - -
Pral3281g00007 1050 SMART LRR_sd22_2 614 640 - -
Pral3281g00007 1050 SMART LRR_sd22_2 542 568 - -
Pral3281g00007 1050 SMART LRR_sd22_2 190 216 - -
Pral3281g00007 1050 SMART LRR_sd22_2 683 709 - -
Pral3281g00007 1050 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 185 - -
Pral3281g00007 1050 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Pral3281g00007 1050 Pfam Protein kinase domain 828 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3281g00007 Pral-Chr3281 69229 76185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3281g00007 591 727 Receptor kinase-like Gene Family AT3G47570 33.333 3.54e-11 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3281g00007 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3281g00007 - K13420 qsa:O6P43_031966 1021.54