Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3281g00001 ATGAGGAAGAAACTCGACACTCGTTTCCCTGCCGCTCGGATTAAGAAAATTATGCAATCAGATGAGGATGTAGGGAAGATTGCCATGGCCGTGCCTCTTCTTGTTTCTAAAGCACTAGAGCTCTTCCTGCAAGATTTATGTGATCGGACGTATGAAATAACATTGAGAAGAGGGGCAAAGACAATGAATTCTTTTCATTTAAAACAATGTGTACAGACTTTTAATGTCTTCGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGCCACGTTACTTCTGGAGATGACCGCACTGTCTGTAAAAGAAGGAAGGTTGATGATGATGGAAATGACAGTGACGATGATGCCAAAAGAAATAAGATGGCAGAAAATGTACATCATGCTGGTGGTAGGGGAAGAGGACGGGGCAGAGGCAGGGGTCGTGGCCGAGTAAGTAGAACAACAGATCGAGAGATTAATGCACATGTCAAATCTGAAGATGATCATCATAATGATGCATTGATGCGCACTCACAGCAATGAAAGCATGGAAATTGGTACGGAACATGACGTGAAGCCTTCCATTGGCAAGACATCAGAAGCATGCTTTAGAAATTTTGACTTAAATATGGATCCCGTGGAGGAGAACGGAAATTCACCAACCAGCATGGCTCCTGTCCAACCTTGTCCATCAGAAAAACCAACGTCAATTTGTCCATCTCAAAAACCAACGACAACTTGTCCATCTGAAAAGCCAACCCCAGAACCGAAACACGAAGAAATCCCAGGCTGGTCGCTGTCTGATGTGGAAAAAATGGCCATTGATCCTGTCCAACTGGTCAACATGAATGGGAGGTTGGATGAAGATGATGAAGATTATGATGAAGAATGTTGA 882 0.432 MRKKLDTRFPAARIKKIMQSDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNSFHLKQCVQTFNVFDFLKDIVSKVPDLGGHVTSGDDRTVCKRRKVDDDGNDSDDDAKRNKMAENVHHAGGRGRGRGRGRGRGRVSRTTDREINAHVKSEDDHHNDALMRTHSNESMEIGTEHDVKPSIGKTSEACFRNFDLNMDPVEENGNSPTSMAPVQPCPSEKPTSICPSQKPTTTCPSEKPTPEPKHEEIPGWSLSDVEKMAIDPVQLVNMNGRLDEDDEDYDEEC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3281g00001 293 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Pral3281g00001 293 MobiDBLite consensus disorder prediction 209 265 - -
Pral3281g00001 293 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Pral3281g00001 293 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Pral3281g00001 293 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 125 - -
Pral3281g00001 293 FunFam dr1-associated corepressor homolog 1 86 - -
Pral3281g00001 293 MobiDBLite consensus disorder prediction 145 165 - -
Pral3281g00001 293 MobiDBLite consensus disorder prediction 209 244 - -
Pral3281g00001 293 MobiDBLite consensus disorder prediction 105 165 - -
Pral3281g00001 293 MobiDBLite consensus disorder prediction 105 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3281g00001 Pral-Chr3281 12220 15895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3281g00001 1 126 CCAAT-HAP5 Transcription Factor Family AT3G12480 69.403 2.34e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral3281g00001 CBFD_NFYB_HMF 1.4e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3281g00001 K21752 - gmx:100779786 306.605