Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3279g00018 ATGAAATTTGCAGACGGGTGCATTGCTGGAGGTGCTGCTGGTGTTGTTGTAGAAACAACTTTGTATCCAATTGACACTATAAAAACTCGACTCCAGGCTGCCCGTGGTGGAGGGAAAATCATTTTAAAGGGTCTATATTCTGGATTGGCTGGAAATCTTGCTGGTGTCTTACCAGCGTCTGCGATTTTTGTTGGTGTATATGAACCCACAAAACTGAAACTGCTAGATTCCCTGCCTGGAAATCTCAGTGCTGTTGCTCATTTTGTTGCAGGTGCCATTGGTGGTGTGGCTTCTTCTCTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGAATGCAAACTGGACAGTTCAGTTCAGCTCCTGCTGCTGTCCGTCTCATTGTTGCCAAGGAGGGTTTCAAAGGTCTCTATGCGGGATATGGATCCTTCCTGTTGCGAGATTTGCCATTTGATGCCATACAATTTTGCATATATGAGCAGCTTCGGATAGGTTATAAGTTAGCGGCCAAAAGAGATCTAAATGATCCAGAGAATGCTATGCTTGGTGCTTTTGCTGGTGCTGTAACAGGAGCAGTTACAACTCCTCTGGATGTTGTAAAAACCAGATTGATGGTTCAGGGATCACAAAACCAGTACAAAGGTATTAGTGATTGTGTGAGAACAATAATCAAAGACGAAGGAACTCAAACTCTCTTCAAGGGTGTGGGGCCAAGAGTTTTGTGGATAGGCATTGGAGGTTCAATTTTCTTTGGTGTTCTTGAGAAGACAAAGCAAATTCTTGCCCAGAGGCACCAGCAAAATGAGGCCGAGAGGCCAGTTTCTCCTAGCTCCAGAATGAGCTGA 843 0.446 MKFADGCIAGGAAGVVVETTLYPIDTIKTRLQAARGGGKIILKGLYSGLAGNLAGVLPASAIFVGVYEPTKLKLLDSLPGNLSAVAHFVAGAIGGVASSLVRVPTEVVKQRMQTGQFSSAPAAVRLIVAKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAKRDLNDPENAMLGAFAGAVTGAVTTPLDVVKTRLMVQGSQNQYKGISDCVRTIIKDEGTQTLFKGVGPRVLWIGIGGSIFFGVLEKTKQILAQRHQQNEAERPVSPSSRMS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3279g00018 280 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 5 271 - -
Pral3279g00018 280 PRINTS Mitochondrial carrier protein signature 182 204 IPR002067 GO:0055085
Pral3279g00018 280 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Pral3279g00018 280 PRINTS Mitochondrial carrier protein signature 19 33 IPR002067 GO:0055085
Pral3279g00018 280 PRINTS Mitochondrial carrier protein signature 6 19 IPR002067 GO:0055085
Pral3279g00018 280 Gene3D Mitochondrial carrier domain 4 274 IPR023395 -
Pral3279g00018 280 ProSiteProfiles Solute carrier (Solcar) repeat profile. 177 259 IPR018108 -
Pral3279g00018 280 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 3 270 - -
Pral3279g00018 280 Pfam Mitochondrial carrier protein 177 262 IPR018108 -
Pral3279g00018 280 Pfam Mitochondrial carrier protein 3 75 IPR018108 -
Pral3279g00018 280 Pfam Mitochondrial carrier protein 82 162 IPR018108 -
Pral3279g00018 280 SUPERFAMILY Mitochondrial carrier 5 254 IPR023395 -
Pral3279g00018 280 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 73 IPR018108 -
Pral3279g00018 280 ProSiteProfiles Solute carrier (Solcar) repeat profile. 82 164 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3279g00018 Pral-Chr3279 569071 593928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3279g00018 57 262 Chloroplast and Mitochondria Gene Families AT1G07030 28.054 9.71e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3279g00018 K15111 - nnu:104605501 439.499