Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3275g00004 ATGACGGTGGCGTCGGATTCTTCTCCAGAGTCTTTCAGCCAGATGATGGCTTCCATGCCGGGGTTTCGATTCCATCCTACCGATGAGGAACTAGTTATGTACTATCTGAAGAGGAAGATGTGTAGGAGGAGGCTGAAGCTGGATGTAATTCGTGAAACTGATGTCTACAAATGGGATCCTGAGGAATTGCCAGGGCAGTCAGTGCTGAAAACTGGAGAGAGGCAATGGTTCTTTTTCAGCCCTAGAGACAGAAAGTATCCTAATAGTGGTAGGACTAACCGAGGAACAAGACATGGGTACTGGAAAGCAACAGGGAAGGATCGTAACATTACCTACAATTCTCGGGCAGTTGGGGTGAAAAAGACTTTGGTTTTCTATAGAGGTAGAGCACCACATGGTGAGCGAACTGATTGGGTTATGCATGAGTACACATTGGAGGAAGAAGAACTTGCAAGATGCCAGAATTGTAAGGACTATTATGCACTTTACAAGGTGTTCAAGAAAAGCGGACCTGGTCCTAAAAATGGTGAACAGTATGGTGCACCATTTGTAGAAGAAGAATGGGTAGATGATGACTTCGTAGATTTTAATGTTAACTCAGCCGGCAAGGAGGTTCCAATTTCACAAGTTGATAAGGGTACTACTGTTGATACTGTGACTGGTAATGGTCAAGTGCAGCCTTTGTTTGATGATGAACTGGATGAGATCTTGAAGAAAATGATGGATGAGCAGGTCCCCGATCTGCCCTCGCTGTGTCCTGCCTTACCTCAGGTCGCTGCTGAAGAAACGCAGAGTGTGGTGGTGGATCAAATTTCTAATGAGGCAGCATTTGCTGAGCCAATCCATCTGTTTCATTCAAGCGGTCACTACTATGACCCTACCCAATCAACTACATCTCATTTGCATGTTTCTGAAGCACCTGAAGTCACTTCTGCTGCCAGCGTTCAAGTAGAGGAGCCTCTCTTTCATGAGGATGACTTCTTGGAAATGAATGATCTCATTGATCCTGAACCAGTATTGCCAAAAATAGAAAATCCTGTGGAGAACTTGGAGTTTGAAGATGGATTAAGTGCACTTGACTTGTACCATGATGCAGAGATGTTTCTTCGCGACATGGGGCATATTGACCAGGAAACTATTTCACATCCTTATATGAATACTTTTGAGAGTAATGTTGTGAATCAGCATTATCAGTCTCTGCCCCTAGGAGACAATGCGGATCAAAGTGGTGAACTCTGGATGCGTCATGAAAGGCCTATGATGAGTCCAGCAGAACATGCAAATGATGTTTCTTTCGCTTCATCAACCTCAGGTGTGGGTTATGAATCTGCCAGCTTGCCTGCTGAAGGTAATCATAATCAAAGTAGCAGTGTGAGACAAGCTCCTACAAGTAGATTGTCTTCTGCTCTCTGGGCCTTCCTTGAGTCAATACCTACCACTCCTGCATCAGCGGCTGAAAATGCAAATCGGGCTCTTGAGCGGGTGTCTAGCTTTAGTAGGGTGAGAGATAATATGAAGCAGGCAAGCACAGCTACCGCCGCAGCTGCTAATGAAACTGCGATTGTGAAGAGAGCAGGTAAAGGAAGGGGAATCTTCTGGTTCTTGCCGGTTCTTATTGCTTTATGTGCTTTTTTATGGGCTTCTATGGGGACATTGAGGCTACCTGGGAGATCCATCCCTTGA 1683 0.4522 MTVASDSSPESFSQMMASMPGFRFHPTDEELVMYYLKRKMCRRRLKLDVIRETDVYKWDPEELPGQSVLKTGERQWFFFSPRDRKYPNSGRTNRGTRHGYWKATGKDRNITYNSRAVGVKKTLVFYRGRAPHGERTDWVMHEYTLEEEELARCQNCKDYYALYKVFKKSGPGPKNGEQYGAPFVEEEWVDDDFVDFNVNSAGKEVPISQVDKGTTVDTVTGNGQVQPLFDDELDEILKKMMDEQVPDLPSLCPALPQVAAEETQSVVVDQISNEAAFAEPIHLFHSSGHYYDPTQSTTSHLHVSEAPEVTSAASVQVEEPLFHEDDFLEMNDLIDPEPVLPKIENPVENLEFEDGLSALDLYHDAEMFLRDMGHIDQETISHPYMNTFESNVVNQHYQSLPLGDNADQSGELWMRHERPMMSPAEHANDVSFASSTSGVGYESASLPAEGNHNQSSSVRQAPTSRLSSALWAFLESIPTTPASAAENANRALERVSSFSRVRDNMKQASTATAAAANETAIVKRAGKGRGIFWFLPVLIALCAFLWASMGTLRLPGRSIP 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3275g00004 560 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 284 - -
Pral3275g00004 560 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Pral3275g00004 560 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Pral3275g00004 560 MobiDBLite consensus disorder prediction 441 460 - -
Pral3275g00004 560 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Pral3275g00004 560 FunFam Nac domain-containing protein 86 27 171 - -
Pral3275g00004 560 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3275g00004 Pral-Chr3275 163497 167749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3275g00004 5 559 NAC Transcription Factor Family AT1G34190 45.904 3.08e-149 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3275g00004 NAM 4.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3275g00004 - - gmx:100794925 642.884