Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3271g00011 ATGGAAGCCATTGCTGAGAATGTCATTGGGCTACTGGGCTCTTTAGCTGCTAAAGAGCTTGACCTTCTTTGCAACTTCCAAGATGATTTGGAGACTATGAAGAGGAAAGTCACTGGAATTAAAGCCGTGCTTCGTGACGCTGAGAGGAAGGCCACGAAAACTGAAGCGATCAATGATTGGCTACAAAAGCTGAGAGATATGTTGCTTGATGCCGAAGACTTGTTGGATGCCTACTCTGCTGAGGAGCTAGCAAGGCAAGTGATGACCAAAGATAAAATGGCGAAGGAGGTACGCATATTCTTCTCCAAATCAAACCGAATTGTTTGTGCACATAAAATGGGTCGAAAAATTAGGGCAATTAGGAAGAATCTAAATGAGATTTATGATGAAAGGAATCCGCTCCAATTGCATGAGAGCGTTTCGAGTACTTCGAATGAGTGTCATGAATGGAGACTAACCGACCCATTTGTGAGCAAACAAGATGTTGTCGGGAGAGACGAGGAAAGAATGCATCTTGTTAGGATCCTTTTAAACCCTGATGTGAAAAATGATGTCGCAGTAGTTCCCATAGTTGGGATTGGAGGATTGGGGAAGACGACACTTGCTCAGCAAGTGTATAATGATGTGGCTGTTAAAAATCATTTTGAGCTTATGATGTGGGTTTGTGTGTCTGATGAATCCCATCAACTTTCCAATAACACGTTAGCTCAAAAGATCATTAAGCAGGAAACATCTGATGGTGCCCGCGAACTATTAAGGCAAAAAATTGAGGGGAAACGTTTTCTACTTGTGTTAGATGATGTTTGGAATATTAAGAATCGTGGTGAATGGCTTAAATTAGAAAACTTGTTCAAAGATGGAAGAAAAGGGAGTATGATCGTTGTCACTACACGTAGTACAGAAGTGGCACAAATAATGGGCACGGTTGCACCTTTTAACTTAAATGATTTGGATTTTGAAACCTCTTGGGAGCTGTTTTGTAGAGTGGCTTTTCAGGATGGAAAAGAACCTGACAATCAAGAGTTGGTAGGGATTGGAAAGGATATTGTGAAAAAATGTGCTGGAGTTCCACTCGCAATAAGAACCATTGGTAGCCTATTGTTCACAAAAAAGTTGGCAGAGTGGTCATCTTTTAGGGACAATGATCTTGCAAATATAGATTCTGAGGATAATAAGATTTTTTCTATCCTTAAACTTAGTTATGATCATCTTCCCTCCCATTTGAAAAATTGTTTTGCATTTTGCTCTTTGTTTCCAAAAGACTACGAGATTGAGAGAGAAACACTAATTCGGCTGTGGATAGCTGAGGGGTTCATTCCCTTGGATAAATATAAGTGCTTGGAGGATGCTGGTGATGAGTGTTTCAAGCAGTTGCTGTCGAGGTGTTTGTTTCAAGATGTGGTGCAAGATTCTCTTGGGGACATATGGTCATGTAAGATGCATGACCTCATACATGATCTAGCACAATCAATCACTAAAAATGAGTGTTACATTGTCAAAAGTGAAAAGATAGAAAAAGAGAAATTTGGTGATCGGATTCGTCATATGTCAAGTCATTTTGACGGTGCTTGGAAGCTTTCACTTGGCAATGCCAACACCAAAAAAATGAGAACAATTTTGTTCCTACAAGGGGATTTGGAATTTATCTTGAGTCAATCTTCGTCAAGAGTTTTTAATCCGATTTGCAGGCCTACACCATCACTTCCAAAGCGCTTACGTGTATTGGTTCTTGAAGATCAGGAGTTGAAAATTCCAGAGAGCATTGGACACTTGAAGCATTTGAGATATCTTGATTTAAGTGGGAATCATAAACTCAAGAAGCTCCCACGAGGAATCAGCAAGTTAGTCCATCGGAAATCTCACATCATTGCAGTCTCTTAG 1881 0.4019 MEAIAENVIGLLGSLAAKELDLLCNFQDDLETMKRKVTGIKAVLRDAERKATKTEAINDWLQKLRDMLLDAEDLLDAYSAEELARQVMTKDKMAKEVRIFFSKSNRIVCAHKMGRKIRAIRKNLNEIYDERNPLQLHESVSSTSNECHEWRLTDPFVSKQDVVGRDEERMHLVRILLNPDVKNDVAVVPIVGIGGLGKTTLAQQVYNDVAVKNHFELMMWVCVSDESHQLSNNTLAQKIIKQETSDGARELLRQKIEGKRFLLVLDDVWNIKNRGEWLKLENLFKDGRKGSMIVVTTRSTEVAQIMGTVAPFNLNDLDFETSWELFCRVAFQDGKEPDNQELVGIGKDIVKKCAGVPLAIRTIGSLLFTKKLAEWSSFRDNDLANIDSEDNKIFSILKLSYDHLPSHLKNCFAFCSLFPKDYEIERETLIRLWIAEGFIPLDKYKCLEDAGDECFKQLLSRCLFQDVVQDSLGDIWSCKMHDLIHDLAQSITKNECYIVKSEKIEKEKFGDRIRHMSSHFDGAWKLSLGNANTKKMRTILFLQGDLEFILSQSSSRVFNPICRPTPSLPKRLRVLVLEDQELKIPESIGHLKHLRYLDLSGNHKLKKLPRGISKLVHRKSHIIAVS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3271g00011 626 Gene3D - 5 118 - -
Pral3271g00011 626 Gene3D Ribonuclease Inhibitor 524 623 IPR032675 -
Pral3271g00011 626 SUPERFAMILY L domain-like 464 616 - -
Pral3271g00011 626 CDD RX-CC_like 12 127 IPR038005 -
Pral3271g00011 626 Coils Coil 61 81 - -
Pral3271g00011 626 PRINTS Disease resistance protein signature 255 269 - -
Pral3271g00011 626 PRINTS Disease resistance protein signature 589 605 - -
Pral3271g00011 626 PRINTS Disease resistance protein signature 353 367 - -
Pral3271g00011 626 PRINTS Disease resistance protein signature 187 202 - -
Pral3271g00011 626 PANTHER DISEASE RESISTANCE PROTEIN RP 53 617 IPR044974 GO:0006952
Pral3271g00011 626 Pfam NB-ARC domain 182 402 IPR002182 GO:0043531
Pral3271g00011 626 Gene3D - 147 310 IPR027417 -
Pral3271g00011 626 Gene3D - 316 400 IPR042197 -
Pral3271g00011 626 Pfam Rx N-terminal domain 7 91 IPR041118 -
Pral3271g00011 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 415 IPR027417 -
Pral3271g00011 626 Gene3D - 401 491 IPR036388 -
Pral3271g00011 626 FunFam Probable disease resistance protein At1g63360 401 490 - -
Pral3271g00011 626 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3271g00011 Pral-Chr3271 156364 158372 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3271g00011 184 495 WRKY Transcription Factor Family AT5G45050 24.149 2.05e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3271g00011 - - pcin:129314965 616.69