Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral3271g00007 | ATGGAAGCCCTTGCTCAGAATGTCATTGGACTACTAGGCTCTTTAGCTGCTAAAGAGCTTGACCTTCTTTGCAACTTCCAAGATGATTTGGAGACTATGGAGGAGAAAGTCAAAGAAATTAAAGCTGTGCTTCATGACGCTGAGAGAAAGGCCACGACAAGTGAAACGATCAATGTTTGGCTACAAAAGCTGAGAAATATGTTGCTTGATGCCGAAGACTTGTTGGATGCCTACTCTGCTGAGAAGCTAGCAAGGGAAGTGATGACCAAAGATAAAATGGCAAAGGAGGTACGCATATTCTTCTCCAAATCAAACCGACTTGTTTGTGCTCATAAGATGGGTTGTAAGATTAGGGCAATTAGGAAGAAACTAGACGAGATTTATGATGAGAAGAATCCACTTCAATTGCATAAGAGCTCTTCGAGCACTCCGAATGAGTCTTGTGAATGGAGACGAACCGGCCCAGATGTGAGCGAACAAGATGTTGTCGGGAGAGATGAGGAAAGAATGCATCTTGTTAGTACCCTTTTAAGCTCTGATGTTAAAAATGATGTCTCAGTGATTCCCATAGTTGGGATCGGAGGATTGGGGAAGACGACACTTGCTCAACAAGTGTACAATGATGTGGCTGCTAAAAATCATTTTGAGCCTATGATGTGGGTTTGTGTGTCTGATGAATCCCATCAACTTTCCAATAACACGTTAGCTCAAAAGATCATTAAGAAGGAAACATCTGATGGTGCCCTCGAGCTACTAAGACATAAAATTAAGGACAAACGTTTTCTGCTCGTGTTAGATGATGTTTGGAATATTAAGAATCGTGGGGAATGGCTTAAATTAGAAAACTTGTTCAAAGATGGAAGGAAAGGAAGTATGATCATTGTCACTACACGGAGTACAGAAGTGGCGGACACAATCGGCACAAATCCACCTCTTTCCTTAAAGGATTTGGATGAAGATAAGTCTTGGGAGCTATTTTGTAGAGTGGCTTTTCGGGACGGAAAAGAACCTACTGATCACAAGTTGGTAGGGATTGGAAAGGATATTGTGAGAAAATGTCATGGAGTTCCGCTTGCAATAAGAACCATTGGTAGCTTATTGTTTAACAAAGCTACCTTAAAAGTGAGTGAGTGGTTATCTTTTAGGGACCGTGAACTTGCAAATGTAGATTATGAGAATGATAATATTTTTTCTATCCTTAAACTTAGTTATGATCATCTTCCCTTCTATTTGAAAAATTGTTTTGCATTTTGCTCTTTGTTTCCAAAAGATTACGAGATTGAGAGAGAAACACTAATTCAGCTATGGATAGCTGAAGGGTTCATTCAACCCTTGGATAAAAGTAGGCGCTTGGAAGATGTTGGTGATGAGTATTTCAAGCAGTTGTTGTCGAGGTGCTTGTTTCAAGATGTGAAGGAAAAAAATTCTGGTAACATATGGTCATGCAAGATGCATGACCTCATACATGATCTAGCACAATCAGTGAGTAAAAATGAGTGTTACATTGTCACAAGTGAAAAAATAGAAGAAGAGAAATTTGGTGATGGGATTCGTCATATGTCAAGTCATTTTCATGGTGCCTGCAAGTTTTCACTTGGTAATGCCAACACCAAAAAAATGAGAACAATTTTGTTCCTACAAGGACATTTGGATTTTAACTTGAGTCAGTCTTCGGCAAGAGTTTTTAATCTAATTTGCGGGCCTACAACATCACTTCCAAAGCACTTACGTGTATTGGTTCTTGTAGATCAAGAGTTGAAAATTTCAGAGAGTATCGGATACTTGAAGCATTTAAGATATCTTGATTTAAGTAGGAATCGTAAACTCAAGAAGCTCCCACGAGGCATCACCAAGTTGTATAACTTGTTGACCCTAAAACTTAATAGTTGTTGA | 1893 | 0.392 | MEALAQNVIGLLGSLAAKELDLLCNFQDDLETMEEKVKEIKAVLHDAERKATTSETINVWLQKLRNMLLDAEDLLDAYSAEKLAREVMTKDKMAKEVRIFFSKSNRLVCAHKMGCKIRAIRKKLDEIYDEKNPLQLHKSSSSTPNESCEWRRTGPDVSEQDVVGRDEERMHLVSTLLSSDVKNDVSVIPIVGIGGLGKTTLAQQVYNDVAAKNHFEPMMWVCVSDESHQLSNNTLAQKIIKKETSDGALELLRHKIKDKRFLLVLDDVWNIKNRGEWLKLENLFKDGRKGSMIIVTTRSTEVADTIGTNPPLSLKDLDEDKSWELFCRVAFRDGKEPTDHKLVGIGKDIVRKCHGVPLAIRTIGSLLFNKATLKVSEWLSFRDRELANVDYENDNIFSILKLSYDHLPFYLKNCFAFCSLFPKDYEIERETLIQLWIAEGFIQPLDKSRRLEDVGDEYFKQLLSRCLFQDVKEKNSGNIWSCKMHDLIHDLAQSVSKNECYIVTSEKIEEEKFGDGIRHMSSHFHGACKFSLGNANTKKMRTILFLQGHLDFNLSQSSARVFNLICGPTTSLPKHLRVLVLVDQELKISESIGYLKHLRYLDLSRNRKLKKLPRGITKLYNLLTLKLNSC | 630 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral3271g00007 | 630 | Gene3D | - | 152 | 309 | IPR027417 | - | |
| Pral3271g00007 | 630 | PANTHER | DISEASE RESISTANCE PROTEIN RP | 31 | 629 | IPR044974 | GO:0006952 | |
| Pral3271g00007 | 630 | Gene3D | - | 5 | 117 | - | - | |
| Pral3271g00007 | 630 | Coils | Coil | 61 | 81 | - | - | |
| Pral3271g00007 | 630 | SUPERFAMILY | L domain-like | 470 | 630 | - | - | |
| Pral3271g00007 | 630 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 150 | 418 | IPR027417 | - | |
| Pral3271g00007 | 630 | Gene3D | - | 404 | 495 | IPR036388 | - | |
| Pral3271g00007 | 630 | PRINTS | Disease resistance protein signature | 255 | 269 | - | - | |
| Pral3271g00007 | 630 | PRINTS | Disease resistance protein signature | 187 | 202 | - | - | |
| Pral3271g00007 | 630 | PRINTS | Disease resistance protein signature | 353 | 367 | - | - | |
| Pral3271g00007 | 630 | PRINTS | Disease resistance protein signature | 593 | 609 | - | - | |
| Pral3271g00007 | 630 | Pfam | Rx N-terminal domain | 7 | 90 | IPR041118 | - | |
| Pral3271g00007 | 630 | Gene3D | - | 316 | 403 | IPR042197 | - | |
| Pral3271g00007 | 630 | Pfam | NB-ARC domain | 175 | 405 | IPR002182 | GO:0043531 | |
| Pral3271g00007 | 630 | MobiDBLite | consensus disorder prediction | 135 | 149 | - | - | |
| Pral3271g00007 | 630 | Gene3D | Ribonuclease Inhibitor | 551 | 630 | IPR032675 | - | |
| Pral3271g00007 | 630 | FunFam | Probable disease resistance protein At1g63360 | 404 | 494 | - | - | |
| Pral3271g00007 | 630 | MobiDBLite | consensus disorder prediction | 135 | 161 | - | - | |
| Pral3271g00007 | 630 | Coils | Coil | 30 | 50 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral3271g00007 | Pral-Chr3271 | 111079 | 112971 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral3271g00007 | 184 | 627 | WRKY Transcription Factor Family | AT5G45050 | 23.093 | 3.46e-09 | 58.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral3271g00007 | - | - | pcin:129314965 | 592.423 |