Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3271g00006 ATGGAAGCCCTTGCTGAGAATGTCATTCGGCTACTGGGCTCTTTAGCTGCTAAAGAGCTTGACCTTCTTTGCAACTTCCAAGATGATTTGGAGACCATGAAGAGGAAAGTCACTGGAATTAAAGCCGTGCTTCGTGACGCTGAGAGAAAGGCCACGAAAAGTGAAGCGATCAATGATTGGCTACAAAAGCTGAGAGGTATGTTGCTTGATGCCGAAGACTTGTTGGATGCCTACTCTGCTGAGGAGCGAGCAAGGGAAGTGATGACCAAAGATAGAATGGCGAAGGAGGTATGCATATTCTTCTCCAAATCAAACCGACTTGTTTGTGCTCATAAGATGGGTTGTAAGATTGGGGCAATTAGGAAGAAACTAGACGAGATTTATGATGAGAAGAATCCACTTCAATTGCATGAGAGCTCTTCGAGCACTTTGAATGAGTCTTGTGAATGGAGACGAACCGGCCCAGATGTGAGCGAACAAGATGTTGTCGGGAGAGACGAGGAAAGAATGCATCTTGTTAGTACCCTGTTAAGCTCTGATGTTAAAAATGATGTCTCAGTGATTCCCATAGTTGGGATCGGAGGATTGGGGAAGACGACACTTGCTCAACAAGTGTATAATGATGTGGCTGATAAAAATCATTTTGAGCCTATGATGTGGGTTTGCGTGTCTGATGAATCCCATCAACTTTCCAATAACACGTTCGCTCAAAAGATCATTAAGAAGGAAACATCTGATGGTGCCCTCGAACTATTAAGACATAAAATTAAGGAGAAACGTTTTCTACTCGTGTTAGATGATGTTTGGAATATTAAGAATCGTGGGGAATGGCTTAAATTAGAAAACTTGTTCAAAGATGGAAGAAAAGGAAGTATGATCATTGTCACTACACGGAGTACGGAAGTGGCGGACACAATGGGCACAAATCCACCTCTTTCCTTAAAGGATTTGGATGAAGATAAGTCCTGGGAGCTATTTTGTAGAGTGGCTTTTCGAGACGGAAAAGAACCTGCTGATCACAAGTTGGTAAGGATTGGAAAGGATATCGTGAGAAAATGTCATGGAGTTCCGCTTGCAATAAGAACCATTGCCAGCTTATTGTTTAACAAAGCTACCTTAAAAGTGAGTGAGTGGTCATCTTTTAGGGACAGTGAACTTGCAAATATAGATTATGAGAATAATAATATTTTTTCTATCCTTAAACTTAGTTATGATCATCTTCCCTTCTATTTGAAAAATTGTTTTGCATTTTGCTCTTTGTTCCCAAAAGATTACGAGATTGAGAGAGAAACACTAATTCAACTATGGATAGCTGAGGGGTTCATTCAACCCTTGGATAAAAATAGGCGCTTGGAAGATGTTGGTGATGAGTATTTCAAGCAGTTGTTGTCGAGGTGCTTGTTTCAAGATGCGAAGGAAAATAATTCTGGTGACATATGGTCGTGCAAGATGCATGATCTCATACATGATCTAGCACAATCAGTCTCTAAAAATGAGTGTTACATTGTCACAAGTGAAAAAATAGAAGAAGAGAAATTTGGTGATGGGATTCGTCATATGTCAAGTCATTTTCATGGTGCCTGCAAGTTTTCACTTGGTAATGCTAACACCAAAAGAATGAGAACAATTTTGTTCCTACAAGGACATTTGGATTTTATCTTGAGTCAGTCTTCGGTAAGAGTTTTCAATCTAATTTGCGGGCCTACAACATCACTTCCAAAGCACTTACGTGTATTGGTTCTTGTAGATCAAGAGTTGAAAATTTCAGAGAGTATCGGAGACTTGAAGCATTTAAGATATCTTGATTTAAGTAGGAATCGTAAACTCAAGAAGCTCCCACAAGGAATCACCAAGTTGTATAACTTGTTGATCCTAAAACTTAATAGTTGTTCATCTTTGGCATCACTTCCAAAGTCCATTAAAAATCTCACATCATTACAATCTCTTGACCTCTCAGGCTGTATTTCTTTGGCATCACTTCCAGAGTCTATCAGATATCTCACATCATTGCAATCTCTTAATGTCTCTCGCTGCATTTCTTTGGCATCACTTCCAGAGTCCATCAGAAATTTCACATCATTGCAGTCTTTTGACCTCTTTGGCTGCACTTCTTTGGCATCACTTCCATCCAGCTGCACTTCTTTAGCATCACTTCCAGAGTCCATCAGAAATCTCACATCATTGCAGTCTCTTGACCTCTCTGACTGTACTTCTTTAGCATCACTTTCAGAGTCCATCGGAAATCTCACATCATTGCAGTCTCTTTACCTCTTTCGCTGCACTTCTTTGGCATCACTTCCGGAGTCCATCGGAAAT 2316 0.4024 MEALAENVIRLLGSLAAKELDLLCNFQDDLETMKRKVTGIKAVLRDAERKATKSEAINDWLQKLRGMLLDAEDLLDAYSAEERAREVMTKDRMAKEVCIFFSKSNRLVCAHKMGCKIGAIRKKLDEIYDEKNPLQLHESSSSTLNESCEWRRTGPDVSEQDVVGRDEERMHLVSTLLSSDVKNDVSVIPIVGIGGLGKTTLAQQVYNDVADKNHFEPMMWVCVSDESHQLSNNTFAQKIIKKETSDGALELLRHKIKEKRFLLVLDDVWNIKNRGEWLKLENLFKDGRKGSMIIVTTRSTEVADTMGTNPPLSLKDLDEDKSWELFCRVAFRDGKEPADHKLVRIGKDIVRKCHGVPLAIRTIASLLFNKATLKVSEWSSFRDSELANIDYENNNIFSILKLSYDHLPFYLKNCFAFCSLFPKDYEIERETLIQLWIAEGFIQPLDKNRRLEDVGDEYFKQLLSRCLFQDAKENNSGDIWSCKMHDLIHDLAQSVSKNECYIVTSEKIEEEKFGDGIRHMSSHFHGACKFSLGNANTKRMRTILFLQGHLDFILSQSSVRVFNLICGPTTSLPKHLRVLVLVDQELKISESIGDLKHLRYLDLSRNRKLKKLPQGITKLYNLLILKLNSCSSLASLPKSIKNLTSLQSLDLSGCISLASLPESIRYLTSLQSLNVSRCISLASLPESIRNFTSLQSFDLFGCTSLASLPSSCTSLASLPESIRNLTSLQSLDLSDCTSLASLSESIGNLTSLQSLYLFRCTSLASLPESIGN 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3271g00006 772 Gene3D - 6 118 - -
Pral3271g00006 772 PANTHER DISEASE RESISTANCE PROTEIN RP 59 757 IPR044974 GO:0006952
Pral3271g00006 772 Gene3D - 316 403 IPR042197 -
Pral3271g00006 772 Gene3D Ribonuclease Inhibitor 714 772 IPR032675 -
Pral3271g00006 772 Gene3D Ribonuclease Inhibitor 546 713 IPR032675 -
Pral3271g00006 772 Pfam NB-ARC domain 175 405 IPR002182 GO:0043531
Pral3271g00006 772 Coils Coil 61 81 - -
Pral3271g00006 772 Gene3D - 151 309 IPR027417 -
Pral3271g00006 772 FunFam Probable disease resistance protein At1g63360 404 494 - -
Pral3271g00006 772 Pfam Rx N-terminal domain 7 88 IPR041118 -
Pral3271g00006 772 Pfam Leucine rich repeat 597 654 IPR001611 GO:0005515
Pral3271g00006 772 CDD RX-CC_like 8 127 IPR038005 -
Pral3271g00006 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 418 IPR027417 -
Pral3271g00006 772 Gene3D - 404 495 IPR036388 -
Pral3271g00006 772 PRINTS Disease resistance protein signature 255 269 - -
Pral3271g00006 772 PRINTS Disease resistance protein signature 353 367 - -
Pral3271g00006 772 PRINTS Disease resistance protein signature 187 202 - -
Pral3271g00006 772 PRINTS Disease resistance protein signature 723 739 - -
Pral3271g00006 772 SUPERFAMILY L domain-like 483 767 - -
Pral3271g00006 772 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3271g00006 Pral-Chr3271 98068 100848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3271g00006 184 770 WRKY Transcription Factor Family AT5G45050 24.800 2.03e-21 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3271g00006 - - pcin:129315883 598.971