Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3271g00002 ATGGAAGCCCTTGTTGAGAATGTCATTGGGCTACTGCGTTCTTTAGCTGCTAAAGAGCTTGACCTTCTTTGCAACTTCCAAGATGATTTGGAGACTATGAAGAGGAAAGTCACTGCAATTAAAGCCGTGCTTCGTGACGCTGAGAGAAAGGCCACGAAAAGTGAAGCGATTAATGATTGGCTCCAAAAGCTGAGAGGTATGTTGCTTGATGCCGAAGACTTGTTGGATGCCTACTCTGCCGAGGAGCTAGCAAGGGAAGTGATGACCAAAGATAAAATGGCGAAGGAGGTACGCATATTCTTCTCCAAATCAAACCGACTTGTTTGTGCTCATAAGATGGGTTGTAAGATTGGGGCAATTAGGAAGAAACTAGATGAGATTTATAATGAGAAGAATCCACTTCAATTGCATGAGAGCTCTTCGAGCACTTCGAATGAGTCTTGTGAATGGAGACGAATCGGCCCAGATGTGAGCAAACAAGATGTTGTCGGGAGAGATGAGGAAAGAATGCATCTTGTTAGTACCCTTTTAAGCTCTAATGTTAAAAATGATGTCTCAGTGATTCCCATAGTTGGGATCGGAGGATTGGGGAAGACGACACTTGCTCAACAAGTGTATAATGATGTGGCTGATAAAAATCATTTTGAGCCTATGATGTGGGTTAGTGTGTCTGATGAATCACATCAACTTTCCAATAACATGTTAGCTCAAAAGATCATTAAGAAGGAAACATCTGATGGTACCCTCGAACTATTAAGACATAAAATTAAGGAGAAGCGTTTTCTACTCGTGTTAGATGACGTTTGGAATATTAAGAATCGTGGGGAATGGCTTAAATTAGAAAACTTGTTCAAAGATGGGAGAAAAGGAAGTATGATCATTGTCACTACACGGAGTATGGAAGTGGCGGATACAATGGGCACAAATCCACCTCTTTCCTTAAAGGATTTGGATGAAGATAACTGTTGGGAGCTATTTTGTAGAGTGGCTTTTCGGGACGGAAAAGAACCTGCTGATCACAAGTTGGTAGGGATTGGAAAGGATATTGTGAGAAAATGTCACGGAGTTCCGCTTGCAATAAGAACTATTGGTAGCTTATTGTTTAACAAAGCTACCTTAAAAGTGAGTGAGTGGTCATCTTTTAGGAACAATGAACTTGCAAATATAGATTATGAGAATAATAATATTTTTTCTATCCTTAAACTTAGTTATGATCATCTTCCCTTCTATTTGAAAAATTGTTTTGCATTTTGCTCCTTGTTTCCAAAAGATTACAAGATTGAGAGAGAAACACTAATTCAACTATGGATAGCTGAAGGGTTCATTCAACCCTTAGATAAAAATAGGCGCTTGGAAGATGTTGGTGATGAGTATTTCAAGCAGTTGTTGTCGAGGTGCTTGTTTCAAGATGTGGAGGAAAATAATTCTGGTGACATACAGTCGTGCAAGATGCATGATCTCATACATGATCTAGCA 1476 0.3963 MEALVENVIGLLRSLAAKELDLLCNFQDDLETMKRKVTAIKAVLRDAERKATKSEAINDWLQKLRGMLLDAEDLLDAYSAEELAREVMTKDKMAKEVRIFFSKSNRLVCAHKMGCKIGAIRKKLDEIYNEKNPLQLHESSSSTSNESCEWRRIGPDVSKQDVVGRDEERMHLVSTLLSSNVKNDVSVIPIVGIGGLGKTTLAQQVYNDVADKNHFEPMMWVSVSDESHQLSNNMLAQKIIKKETSDGTLELLRHKIKEKRFLLVLDDVWNIKNRGEWLKLENLFKDGRKGSMIIVTTRSMEVADTMGTNPPLSLKDLDEDNCWELFCRVAFRDGKEPADHKLVGIGKDIVRKCHGVPLAIRTIGSLLFNKATLKVSEWSSFRNNELANIDYENNNIFSILKLSYDHLPFYLKNCFAFCSLFPKDYKIERETLIQLWIAEGFIQPLDKNRRLEDVGDEYFKQLLSRCLFQDVEENNSGDIQSCKMHDLIHDLA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3271g00002 492 Gene3D - 4 118 - -
Pral3271g00002 492 Pfam Rx N-terminal domain 5 90 IPR041118 -
Pral3271g00002 492 Coils Coil 61 81 - -
Pral3271g00002 492 CDD RX-CC_like 4 127 IPR038005 -
Pral3271g00002 492 Gene3D - 404 492 IPR036388 -
Pral3271g00002 492 Pfam NB-ARC domain 173 405 IPR002182 GO:0043531
Pral3271g00002 492 FunFam Probable disease resistance protein At1g63360 404 492 - -
Pral3271g00002 492 PANTHER DISEASE RESISTANCE PROTEIN RP 41 492 IPR044974 GO:0006952
Pral3271g00002 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 418 IPR027417 -
Pral3271g00002 492 Gene3D - 149 309 IPR027417 -
Pral3271g00002 492 Gene3D - 316 403 IPR042197 -
Pral3271g00002 492 PRINTS Disease resistance protein signature 353 367 - -
Pral3271g00002 492 PRINTS Disease resistance protein signature 255 269 - -
Pral3271g00002 492 PRINTS Disease resistance protein signature 187 202 - -
Pral3271g00002 492 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3271g00002 Pral-Chr3271 34741 36462 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3271g00002 184 370 WRKY Transcription Factor Family AT5G45050 27.979 2.82e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3271g00002 - - pcin:129314965 592.423