Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3270g00003 ATGTCTAATAGTTCCTCTCATAATGGTCATCTTTTCTTTGTCTCAACAATATCCTCAAACCCGTGTGCCGAAAGGCTTGGCTCTCTCATGTTTTCTGTAGCCAAAAACTTCATTATATTCTTGGCCATGGTCATTCTCTGCAATGGTGTTCATTATCTTCTCAAGCCTTATTCAATGCCTCGCATTATTTCTGACATCCTCGTTGGTATGATTGTGGGCAACATCGGATTCCTACGAGATATATACGAAGAATTCAACAAGACGTTCGGATTCATAATCGATTTTGTGATGATGTTTTACATGTTTGCTCTGGGAATAGAAATGGATCCTTATGCGATCTTCAAACAGCCATCTCGGGATGCTCAAATCGCCTACGCCGGAATCCTCTCCACCTTCATTGTCGGCTGCTTCACCACGCCATTATTCGATTTCTTCTCCGGCAAACACAAACTCTACTTCACACTCTGTCTCTCCACTCTCCTCGCCAGCACGGCGTCGCCGGTGTTGACACGTCTCATCACAAGCCTCAAAATCAGCAAGTCCGACATCGGTAAGCTCGTGATTGCCGCCGGCATGCACTCCGACTTCCTCTGCTCTCTGCTCCTCTCCATCGGCTACATTGCGATGCCGTTGCCGGTGTTCTGCGAGAAGGAGGCTTACAGGATGAACGACAGAGGAAAAGCTCGCATTAAACTGTCCATTGTTATGGGATGTGCAGTTCTAGGGCAAATGTTGTTCACAGCCATAGTTTCTCCAATAATGATGAGATGGGTGAATAATGAAAACCCAGAAGGAAAACCCATGAAAGGTGCACACTTGGTGCTTTCTGTGGCATTTATGGTGTTAATCTGTGCATCTTCAACTCTGTATGATTACAGTCCGATTCTGAGTGCGTTCATGGCTGGGATTTGCTTACCACGTGAAGGTAGGTTATCGAAGTGGGTCATCACGAAGATAAATTACATGTTAACTTCGATTTTCTTTCCTATATTTTTCTTGTGGATGGGTTATGAGGCTGATTTAAGGAAGTTTGAGGCTTGGAGGTTGGCGACATGGATAAGGTTGTTGATGTTGGTGGCCATAGGAATGGCAAGTAAAGTTGCTGGAACTGTTATTTCAGGAGCCATGTTGGGTTTTAATTGGCCTGATTCTGTTGCCATTGGCTTGCTTCTCACCACAAAGGGCCATTTTCACATATACTTAGCCATTAAAGTGATGAAATGTGGGGGAAATACTACAACTGGAATAGAGATGATAATTGCAATCTTTTTCACAGTTCTTCATTCCCCATCAGTCGTAGCACACATTATCAAGCGAGCTAGAAAAAGAGCTCCAACGCATCGCATGGCCCTCCAGTTGCTGGAACCATCAAGTGAACTCAGAATACTGCTCTGTGTTCACGGACCACAAAACGTCCCTGCATGCATCAACTTCATGGAGATTTCCAGAGGAACGACAGACCCAGGAATGTTCGTTTGTGTCACCGACTTGGTGGAACTCACCGACGAGCTAGCAGCCGCCGCAGAGAAGGCCGAAGGAGGAGGAGATAATAAGACTGTGGCTCTAAACGACAGGGCTATTGCGGCTAACAGAGAGAAAGTGACGAGCTCGTTTGAAGAATATGTTGACGAGGATGGTGATGGGATTACTATTAGGAGATCCATGGCGGTGTCGACGTTCATTAACATGGCACGTGATATTTGCTCTTTAGCTGATGAACTCAACATTGCCCTCATCGTATTGCCATTTCATAGGAGACATCGTGAGGATGGAACGCTTGATGGAGGTAATCCTGGCTTCAGGCACGTCAATCGAAAGGTTCTGAAAAGTGCGCCTTGCTCGGTGGGGATTCTAGTGGACAGAGGTCTAGGATCCATCGAGAAGATACAAAGAACCAGCGTTTCAATCAACGTGGCAGTCATCTTCGTCGGCGGCAAAGACGACCGAGAAGCGATCGCCTACGCCGGCCGAGTTGCGCGGCATTCCGGCGTGAAACTCACAGTCATAAGACTTCTAGTAGACACGACGGCGGAGGCAAACAAATTCTCCGGCCCACTGGGCGTGAACCTATCGGAGCAAGAACAGGAAATGGCATTAGACGACGAGTGTTTTGCACAGTTCTACGAGAAACACATCGTCGGAGGCCGAATCGCGTACATGGAGAAACACCTGGCGAACTCGGCGGAGACGTTCTCGGTGCTGAAATCGTTTGAGGGAAGGTACTCTCTGGTGATAGTGGGGAGAGAAGGAGGAGTGAACTCCATATTAACGAAAGGGATGAACGATTGGCAACAATGTCCAGAATTGGGACCCATCGGAGATGTTCTTTCAGGTCCAGATTTTTCAATCACAGTCTCCGTTTTGATCATACAGCAACATAAGCTTAAAGGAGAACTTGATGGCTTAGACGACGATTTCACAGTCATGATGTAA 2433 0.4677 MSNSSSHNGHLFFVSTISSNPCAERLGSLMFSVAKNFIIFLAMVILCNGVHYLLKPYSMPRIISDILVGMIVGNIGFLRDIYEEFNKTFGFIIDFVMMFYMFALGIEMDPYAIFKQPSRDAQIAYAGILSTFIVGCFTTPLFDFFSGKHKLYFTLCLSTLLASTASPVLTRLITSLKISKSDIGKLVIAAGMHSDFLCSLLLSIGYIAMPLPVFCEKEAYRMNDRGKARIKLSIVMGCAVLGQMLFTAIVSPIMMRWVNNENPEGKPMKGAHLVLSVAFMVLICASSTLYDYSPILSAFMAGICLPREGRLSKWVITKINYMLTSIFFPIFFLWMGYEADLRKFEAWRLATWIRLLMLVAIGMASKVAGTVISGAMLGFNWPDSVAIGLLLTTKGHFHIYLAIKVMKCGGNTTTGIEMIIAIFFTVLHSPSVVAHIIKRARKRAPTHRMALQLLEPSSELRILLCVHGPQNVPACINFMEISRGTTDPGMFVCVTDLVELTDELAAAAEKAEGGGDNKTVALNDRAIAANREKVTSSFEEYVDEDGDGITIRRSMAVSTFINMARDICSLADELNIALIVLPFHRRHREDGTLDGGNPGFRHVNRKVLKSAPCSVGILVDRGLGSIEKIQRTSVSINVAVIFVGGKDDREAIAYAGRVARHSGVKLTVIRLLVDTTAEANKFSGPLGVNLSEQEQEMALDDECFAQFYEKHIVGGRIAYMEKHLANSAETFSVLKSFEGRYSLVIVGREGGVNSILTKGMNDWQQCPELGPIGDVLSGPDFSITVSVLIIQQHKLKGELDGLDDDFTVMM 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3270g00003 810 CDD USP_Like 564 615 - -
Pral3270g00003 810 Pfam Sodium/hydrogen exchanger family 38 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral3270g00003 810 PANTHER CATION/H + ANTIPORTER 37 794 - -
Pral3270g00003 810 FunFam Cation/H(+) antiporter 28 34 446 - -
Pral3270g00003 810 Gene3D - 34 446 IPR038770 -
Pral3270g00003 810 Gene3D - 480 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3270g00003 Pral-Chr3270 15419 18951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3270g00003 15 809 Antiporter Super Family AT3G52080 49.257 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3270g00003 K26731 - gmx:100815945 1069.3