Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3269g00047 ATGGACGCCATCGCTGGGAGTGTTTTTCAGGGACTAACCTCTTTGGCTCTTGAAGAGTTCAAATTGCTGTGGAATGCTAAACATGATGCAGAAAGGATGAAGAACACGATCCTTGCCATCAGAGCTACACTGTTGGATGCAGAGACAAGGGCCAACAACAACCATCAAGTCAGCTTTTGGCTTTCCAGGCTGAAAGATGTCCTCTATGATGCGGATGACCTGCTTGATGATTTGTCCACTGAAGCTTTGAGGAGGGGAACCATGACCAGAAACAAGGTGGCAAAGAAGGTATGGATCTTCTTCTCAAAATCAAACCAAGTTGTTCATAATCTTAAGATGGCTCATAAATTGAGGAAACTCAGGGGAAGGCTGGATGAAGTTGATGATGAAAAGAAAAAATTTCATTTGATTGATCACCCTCCTAAGCCTCTCCCTTTACTTGAGCAACAAACAGACTCTTTTGTGCAAGAAGATGAAATCACTGGGAGAGAGGAGGAAAAAGATTTGATTTTACGTTATTTGTTAGACAGTAATGTAAAATCTAGTGTTTCAATTATTCCTATTGTTGGATTTGGAGGGTTAGGCAAGACCACACTTGCTCAAATTGTGTACAATCACGTGGATGTTCAAAAACATTTTGGGTTGAAAAGATGGGTTTGTGTGTCTGATGAATTTGATGTAAAACAAATAGCACAAAAGATTTTAGAGGAAAAAAGTTCAAAAGAGATGGAGGAAGTGCAACAAGATCTTAGAAAATTAATAGAGGGGAAGAAGTTTTTGATTGTCTTAGATAATGTGTGGAATGAAGATATTGAGGTTTGGTATAAGATGAGATGTTTACTAACCATTGGAGGAGAGGGGAGTATGATAATTGTTACCACACGTAGTAAGAAGGTGGGAAAGATGATGGGCACCTATCCGCCAATTATCCTTAAAGGTTTGGATAGTGAGAGATCATGGGATTTGTTCTGTAGAATGGCTTTCGAAGGGAGTAAAGAGTCAAATGATAAGGAGTTGTTAGAAATTGGGAGGGACGTTGTAAAGAAATGTGGAGGAGTCCCTCTTGCTATTAGAGCTGTTGGAAGGCTTGTGTATGATAAAACTTTAGAAGAAATCACAGATTTGTCATACTTAAGGAACTGTGAGTTTTGGAAAGAAGATAAGTTGGAGAAGAGAATCTTTGCTGTGCTTAAACTCTCTTATGATCATCTTCCTTCACCTATGAAAAATTGTCTTGCTTTTTGTTCATTGTTCCCAAAAGATTTTAGATTCGAGAAGGAAACACTAATTCAAATGTGGGTCGCCGAAGGATTCATTCAATCAACTAATAAGATAAGGTGTGAGGAAGATGTTGGGAATGAATATTTTATGAACCTACTTTCAAGATCCTTCTTCCAAGATGTCTTAAGATATTCATATGGCATACAGTCATGTAAAATGCATGACCTTATTCATGATTTAGCACAATTTGTAGCAAAGGATGAGTACTTTATCATCAAGGAAGGAAAAAAAGAAAGTGCTAAAGAGACAACACGTCATTTGTCATATCATGTGCCAAGAAATGATTGGGAAGTTCCAACTTCCTTCCTCAAGTTTAAAAAATTGAGAACAATGCTCTTGCTCACCCAGGCTTTTTCTTGTCGGATGGATCATCGTGTTTTTGATTTGGTTGCATCAAAATTGAAATCCTTACGTGTTTTGAGCCTAAAGAATTTGAGAATTACTGAAATTTCAGAAAGCATTGGAAAACTGAAGCATCTGAGATTTTTTGATCTTTCATGTAATGATATTATCCAGCTCCCAAGAACTATTACCAAACTCCACAACTTGCAAACCTTAAACCTCAGTTTGAATCCAATTCGAGAATTGCCAAGAGACATTAATAAATTAGTAAGCTTGATGCATCTTAATCTTATGTATTGTGATGATTTGGAATGGATGTCAAGTGGTTTGGGGCAATTAACTTCTCTTCGAACCTTGACATATTTTGTGGTAGATGATCAAGAGATGCATGAGAAAAGGGGAAGTGCAAGGATAAGTGAATTGGGAGAGCTTAACAACTTGAGAGGGATTCTAACAATAAGTGGGTTGAAACACCTGAGGTCAAACCCTGTAAAGGCCGAGTCTGCAAGATTACAAGAGAAGCAACATCTGCAGGAGTTATTATATTATTGGGACACACTCCACTCTCCGAATGGTGAATTGTCTAAAGATGCTTTTGACGAACTGATTTTAGAAGAGCTTCAACCTCATCATACCATCAAAGGTCTAAGCATTACAGGATTTCGGGGGGAAAGGTTACCAGAGTGGATTGGAAATCTGGTGCAACTGCAATATCTTCGGCTCCAGGATTGCAAGTACTTGATGTCACTTCCTGAAGGTCTTCATAATCTCACAGCATTACAATCACTGAGCATACACAGATGCCCATTGTTGGCCGCTGATGATGTTCGGCAAAAAGTTGCTCATCTTCCAAATGTGGACATTAAATAA 2493 0.3843 MDAIAGSVFQGLTSLALEEFKLLWNAKHDAERMKNTILAIRATLLDAETRANNNHQVSFWLSRLKDVLYDADDLLDDLSTEALRRGTMTRNKVAKKVWIFFSKSNQVVHNLKMAHKLRKLRGRLDEVDDEKKKFHLIDHPPKPLPLLEQQTDSFVQEDEITGREEEKDLILRYLLDSNVKSSVSIIPIVGFGGLGKTTLAQIVYNHVDVQKHFGLKRWVCVSDEFDVKQIAQKILEEKSSKEMEEVQQDLRKLIEGKKFLIVLDNVWNEDIEVWYKMRCLLTIGGEGSMIIVTTRSKKVGKMMGTYPPIILKGLDSERSWDLFCRMAFEGSKESNDKELLEIGRDVVKKCGGVPLAIRAVGRLVYDKTLEEITDLSYLRNCEFWKEDKLEKRIFAVLKLSYDHLPSPMKNCLAFCSLFPKDFRFEKETLIQMWVAEGFIQSTNKIRCEEDVGNEYFMNLLSRSFFQDVLRYSYGIQSCKMHDLIHDLAQFVAKDEYFIIKEGKKESAKETTRHLSYHVPRNDWEVPTSFLKFKKLRTMLLLTQAFSCRMDHRVFDLVASKLKSLRVLSLKNLRITEISESIGKLKHLRFFDLSCNDIIQLPRTITKLHNLQTLNLSLNPIRELPRDINKLVSLMHLNLMYCDDLEWMSSGLGQLTSLRTLTYFVVDDQEMHEKRGSARISELGELNNLRGILTISGLKHLRSNPVKAESARLQEKQHLQELLYYWDTLHSPNGELSKDAFDELILEELQPHHTIKGLSITGFRGERLPEWIGNLVQLQYLRLQDCKYLMSLPEGLHNLTALQSLSIHRCPLLAADDVRQKVAHLPNVDIK 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3269g00047 830 Gene3D - 313 400 IPR042197 -
Pral3269g00047 830 ProSiteProfiles Leucine-rich repeat profile. 609 631 IPR001611 GO:0005515
Pral3269g00047 830 Gene3D - 401 490 IPR036388 -
Pral3269g00047 830 SMART LRR_typ_2 561 584 IPR003591 -
Pral3269g00047 830 SMART LRR_typ_2 607 630 IPR003591 -
Pral3269g00047 830 SUPERFAMILY L domain-like 479 816 - -
Pral3269g00047 830 Gene3D Ribonuclease Inhibitor 519 828 IPR032675 -
Pral3269g00047 830 Pfam Rx N-terminal domain 6 91 IPR041118 -
Pral3269g00047 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 415 IPR027417 -
Pral3269g00047 830 PANTHER DISEASE RESISTANCE PROTEIN RP 53 806 IPR044974 GO:0006952
Pral3269g00047 830 Pfam NB-ARC domain 165 402 IPR002182 GO:0043531
Pral3269g00047 830 Gene3D - 148 306 IPR027417 -
Pral3269g00047 830 Gene3D - 5 117 - -
Pral3269g00047 830 PRINTS Disease resistance protein signature 253 267 - -
Pral3269g00047 830 PRINTS Disease resistance protein signature 350 364 - -
Pral3269g00047 830 PRINTS Disease resistance protein signature 559 575 - -
Pral3269g00047 830 PRINTS Disease resistance protein signature 185 200 - -
Pral3269g00047 830 FunFam Probable disease resistance protein At1g63360 401 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3269g00047 Pral-Chr3269 296135 298627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3269g00047 183 809 WRKY Transcription Factor Family AT5G45050 22.941 2.04e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3269g00047 - - pcin:129315145 838.18