Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3269g00028 ATGATAATGGGGAGGGACAAGAACAGTAGTAAGAACAATAACAACGTTGTGAAGCTAAGGAAGGGGTTGTGGTCGCCGGAGGAGGATGAGAAGCTAATAAGGTACATGTTGACCAATGGACAAGGTTGCTGGAGTGACATTGCCAGAAATGCAGGTCTTCAACGTTGTGGTAAAAGTTGTCGCCTTCGTTGGATTAATTATCTCAGACCTGACCTTAAGAGAGGCGCTTTCTCTCTCCAAGAAGAACAACTCATTCTCCATTTTCATTCCATTCTTGGCAATAGGTGGTCTCAGATAGCAGCACGTCTTCCAGGACGCACAGACAATGAGATTAAGAATTTCTGGAACTCTACTTTAAAGAAAAGGATGAAAAACAACACTGCTTGTACTACTGCTGCTACTACTTCTACTGCTATTCCTTCACCAAACAACAGTACAGACTCATCACCAAATCATATTATGCTGAATGGCATCACCACCACCACCACCACATCCTCAATGCCCTTCATCAACATGACCATGTGCAATATGGACTCATCACCTTCATCAATATCATCATCTTCATCGGCATCCGTACAATCCATGCAAGCCGCAGCTTTTGGTGGTGACCACCAGTTAATGGAGTATCCCTTTTCCATGTTGAATAATCACAGTAATATTCCTTATGACATGCCTGCATCCTTTGGTGGTGATGGTGGCGGCGGCGTGGTGGAGGATGGGTTTTATGGAGATGATTATAATAATGGGACGGGGTTAGAGGGAGAAGATAGTAAAATAATGGGGTTAGAAAGAGACCTGTGTCTTCCTCCTCTAGAGAGTAGAAGCATGGAAGAGAAGTATAATAGTAGTAGTGTTGTTCCTACTGATGTGAAAAGTCAAATCAACAACAACCATTTTAATAATGGTTGCTTCAATAACACTGATCATCATCATCATCATCAGGACTTGGTCGGGTTTGGGAATTATAATCATGGACAATCAGGAGAAAACTTAAGAGTGGGAGAATGGGATTTGGAGGGTTTGATGCAAGATATATCCTCTTTTCCTTTCCTTGATTTTCAAGTTGAATGA 1071 0.4211 MIMGRDKNSSKNNNNVVKLRKGLWSPEEDEKLIRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSLQEEQLILHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRMKNNTACTTAATTSTAIPSPNNSTDSSPNHIMLNGITTTTTTSSMPFINMTMCNMDSSPSSISSSSSASVQSMQAAAFGGDHQLMEYPFSMLNNHSNIPYDMPASFGGDGGGGVVEDGFYGDDYNNGTGLEGEDSKIMGLERDLCLPPLESRSMEEKYNSSSVVPTDVKSQINNNHFNNGCFNNTDHHHHHQDLVGFGNYNHGQSGENLRVGEWDLEGLMQDISSFPFLDFQVE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3269g00028 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Pral3269g00028 356 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Pral3269g00028 356 Gene3D - 18 74 - -
Pral3269g00028 356 FunFam MYB transcription factor 18 74 - -
Pral3269g00028 356 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Pral3269g00028 356 SMART sant 20 70 IPR001005 -
Pral3269g00028 356 SMART sant 73 121 IPR001005 -
Pral3269g00028 356 CDD SANT 76 119 IPR001005 -
Pral3269g00028 356 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Pral3269g00028 356 Gene3D - 75 139 - -
Pral3269g00028 356 CDD SANT 24 68 IPR001005 -
Pral3269g00028 356 Pfam Myb-like DNA-binding domain 24 84 - -
Pral3269g00028 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 68 IPR017930 -
Pral3269g00028 356 PANTHER MYB DOMAIN PROTEIN 55 3 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3269g00028 Pral-Chr3269 168594 171988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3269g00028 4 356 MYB Transcription Factor Family AT3G08500 46.479 5.16e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral3269g00028 Myb_DNA-bind_6 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3269g00028 K09422 - zju:107417581 345.125