Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3269g00027 ATGAATGATGGTAGACCGATGGAGCTGCATTACATCAACCCTGTTTTTCCATATACTACTACTGAAAGCTTCATGGAGTTTTTCGACGGACCGCCAGTGGATTATGATCACGCTGGACCAATTCCTTATCAGGAATACTGGTCAATGAACATGAACCCTTACAAGTTTGGATTGTCTGGTCCGGATGGTGCATCTTATTATGGTTCTTACGAAGAAGATAATAGTTTCCCTAGACTGGAGGTCGACAGGGGAGAGTGGGAATATCCTTTAACAACGACCACTGAGGAGCCCACCACAACAGGCTCTCCATCCAGAGGGGACGGAGTGAATGGGATGCAGACCATTACTGAACAATCCAGCCCAAATCGTCATGATTCCAGTAGTGCTCCGGTTATATGGCAAGACAACATCGATCCAGATAATATGACTTATGAGGAATTACTGGACTTGGGTGAGGCAGTTGGAACTCAAAGCCGAGGTCTTTCTCAAGAACTTATTGATTTACTGCCGACCTCGAAGTTCAAATTTGGAAACTTATTTAAAAGAAAAAATTTTGGGAAAAGGTGCGTTATTTGTCAGATGACGTATAGAAGAGGTGACCAACAAATAAAATTACCCTGCCGGCATGTTTACCATGGCGAATGCATCAGTAAATGGCTTAGCATTAACAAGATTTCAGATGATAGACAAACATTAGATAAGATTACCAGAAGATGGGAGATGACGGTGATTCAGTTGGAGAGAAACCGAGTGACCAAGTAA 762 0.4278 MNDGRPMELHYINPVFPYTTTESFMEFFDGPPVDYDHAGPIPYQEYWSMNMNPYKFGLSGPDGASYYGSYEEDNSFPRLEVDRGEWEYPLTTTTEEPTTTGSPSRGDGVNGMQTITEQSSPNRHDSSSAPVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQELIDLLPTSKFKFGNLFKRKNFGKRCVICQMTYRRGDQQIKLPCRHVYHGECISKWLSINKISDDRQTLDKITRRWEMTVIQLERNRVTK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3269g00027 253 FunFam E3 ubiquitin ligase BIG BROTHER 151 227 - -
Pral3269g00027 253 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 225 IPR033276 GO:0004842|GO:0016567|GO:0046621
Pral3269g00027 253 MobiDBLite consensus disorder prediction 91 131 - -
Pral3269g00027 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 227 IPR013083 -
Pral3269g00027 253 MobiDBLite consensus disorder prediction 90 131 - -
Pral3269g00027 253 SUPERFAMILY RING/U-box 188 225 - -
Pral3269g00027 253 Pfam Ring finger domain 188 223 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3269g00027 Pral-Chr3269 153889 157615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3269g00027 3 225 C3H Transcription Factor Family AT3G63530 52.174 6.46e-84 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3269g00027 K19045 - gmx:100785290 342.813