Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3269g00007 ATGATGGATGACGGAGTGCCTCCAAGCCTTTTTGTTAATGATGGTTCATTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGAGAAGAAAAATGAAAAATTAGAGGATTCTAAACCTATTAAAATTGTTTCAGGGTCTTTGACTCCTAATCTTTCTGGTAGTAAAAAGATCTCTGCAGACTTGAAGGCTAATACACAGAAAACATCCCAGGCTGTTTCCAGTGGCAAGCTTGCATTCAGTTTAAAACAAAAGTCGAAGCTAGTGCCTCCACCTGTTAAGTTAAGTGCAGATGATGAAGAAGAAACAGATGGTAGTAATGTTTCGAATGAGGCACCTCTAAAACGGCAAAAGTTGGGGCGTGAAGATGTCACTGAGCGATCTTCTAGACAATCTGATGATGCACCTCCTTCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGAGAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAGTTTGAGGATGTTACACGTCAAAAAAATCCAGGGGATACACCTTTCAAGTTTTTATTTGACGAGAAATGTGCTGACTACAAATATTATGAGTATCTACTAGCCCAGGAAGAAAAGGCTCTGGTGCAGCCCCGGGAATCACAGACATCACGTAATGTGGGTACAAGCTCCTCTTCATCTAGACCGACCAATGTTCCTCGGAGATCATCTCAGCAGCATTCAGCTTACCAAATTCCTGCATCTGCTCTATACGACAGTTCTGAAGATCCTGGAGGTTATGGATCTTCAGGTCAAGCAGCATCAGGAGGAAGTGCTAATGAAACTGGCGGATCATCAAATGCTGATTCTTTAGCATTAATGGAGTTCTACATGAAGAAAGCTGCACAGGAAGAGAAGATGAAAAGACCTAAGTATTCTAAAGATGAGATGCCCCCTCCTGCCTCTCTTCAAGCTTCTACTAAAAAAGGTCATCACATGGGTGATTACATTCCCCAAGAAGAACTAGAGAAGTTCTTGGCTACCTGTAATGATGTAGCAGCGCAGAAAGCTGCCAAGGAGGCTGCAGAGAAGGCTAAAATTCAGGCTGATAATGTGGGTCACAAGCTTTTGTCTAAAATGGGATGGAAAGAAGGCGAGGGTCTGGGCAGCTCCAGGACTGGTATTTCAGATCCAATCATGGCCGGTAATGTTAAGATGAACAACTTGGGGGTTGGTGCAAACAACCCTGGGGAGGTGACTCCTGAGGATGATATATACGAGCAGTACAAAAAGAGGATGATGCTTGGTTATCGTTACAGACCCAATCCTCTGAACAATCCTCGCAAGGCTTATTACTGA 1317 0.4343 MMDDGVPPSLFVNDGSFMERFKQLQQEQEKKNEKLEDSKPIKIVSGSLTPNLSGSKKISADLKANTQKTSQAVSSGKLAFSLKQKSKLVPPPVKLSADDEEETDGSNVSNEAPLKRQKLGREDVTERSSRQSDDAPPSPSDPTVKKVAEKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCADYKYYEYLLAQEEKALVQPRESQTSRNVGTSSSSSRPTNVPRRSSQQHSAYQIPASALYDSSEDPGGYGSSGQAASGGSANETGGSSNADSLALMEFYMKKAAQEEKMKRPKYSKDEMPPPASLQASTKKGHHMGDYIPQEELEKFLATCNDVAAQKAAKEAAEKAKIQADNVGHKLLSKMGWKEGEGLGSSRTGISDPIMAGNVKMNNLGVGANNPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3269g00007 438 Pfam Surp module 147 196 IPR000061 GO:0003723|GO:0006396
Pral3269g00007 438 SUPERFAMILY Surp module (SWAP domain) 135 199 IPR035967 GO:0003723|GO:0006396
Pral3269g00007 438 ProSiteProfiles G-patch domain profile. 355 402 IPR000467 GO:0003676
Pral3269g00007 438 MobiDBLite consensus disorder prediction 251 273 - -
Pral3269g00007 438 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 6 438 IPR040169 -
Pral3269g00007 438 SMART surpneu2 145 199 IPR000061 GO:0003723|GO:0006396
Pral3269g00007 438 MobiDBLite consensus disorder prediction 44 81 - -
Pral3269g00007 438 MobiDBLite consensus disorder prediction 115 130 - -
Pral3269g00007 438 MobiDBLite consensus disorder prediction 202 241 - -
Pral3269g00007 438 MobiDBLite consensus disorder prediction 290 317 - -
Pral3269g00007 438 MobiDBLite consensus disorder prediction 200 273 - -
Pral3269g00007 438 Gene3D Surp module 128 201 IPR035967 GO:0003723|GO:0006396
Pral3269g00007 438 SMART G-patch_5 353 400 IPR000467 GO:0003676
Pral3269g00007 438 ProSiteProfiles SURP motif repeat profile. 147 190 IPR000061 GO:0003723|GO:0006396
Pral3269g00007 438 MobiDBLite consensus disorder prediction 24 146 - -
Pral3269g00007 438 MobiDBLite consensus disorder prediction 24 40 - -
Pral3269g00007 438 Coils Coil 18 38 - -
Pral3269g00007 438 Pfam G-patch domain 356 399 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3269g00007 Pral-Chr3269 42700 48717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3269g00007 344 411 C2H2 Transcription Factor Family AT5G26610 40.580 3.22e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3269g00007 K13096 - gmx:100786213 634.409