LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3267g00115	ATGGTGTTGGATGTTGGCACAGATCGAAGACGATTAGTTGACGTTCAATCGAGTGTCAGGTGCTTTCTTTTGTTGTTAGCTGAGTTTTGGGTTCAAGATTCTTTGGGAAAAATCGTTCAAGTTGAGATGTGGAGATTTAGGCCATTCACACATAAAGAGCCGGCTGGGCTTGAAGGACGCACTATAGATGTTGGCAATCTTAAAATAAATGTTCAAAAGGCCGTCGCTGAAGGGGGGTTCTCTTGTGTCTACTTGGCTCGTGATGCTGTGCACATGTCAAAACGGTTTGCTTTGAAGCACATTATATGCAACGATGAAGAATCCCTTGGACTGGTCAAGAAGGAGATCTCAGTGATGAAGTCATTGAAAGGGCATCCTAATGTTGTCACACTTTATGCACAAGCAATTTTTGACATGGGTAGGACAAAAGAAGCATTCCTTGTGATGGAATTCTGTGAGAAGTCTCTGGTGCAGGTGCTGGAGAGCCGGGGAACAGGGTATTTTGAGGAGCAACAGGTTTTATTGATCTTCAGGGATATATGCAATGCAGTTTTTGCAATGCATTGCCAATCGCCACCTATTGCTCACCGAGACTTGAAAGCCGAAAATCTTCTATTAGCTTCGGATGGCTTGTGGAAATTGTGTGACTTTGGAAGCGTATCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGATAATATCAGAAAGTACACAACTCCTGCCTATAGGGCTCCTGAGATGTGGGATCTGTTTCTGAAAGAAGCCATCAATGAAAAAGTGGACTTATGGGCTCTTGGGTGTCTTCTCTTTCGCATATGCTACTTCAGGAGTGCATTTGATGGAGAATCCAAGCTTCAAGTCCTTAATGGAAACTATCGCATCCCTGATTCACCTAAATACAGTTCATCCATTGTAGACTTAATCAGAGACATGCTTCAAGCTCGACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTCGGGTTAATGAGCAGTTACCTGTTAATTTGCAAAGGTCATTACCTGATACACCACCTGAATTTTCTTCTTCCAACAAGCAGGAAGGTGCTTCAAAGCCTGCTAACAGATCCACCCCAGTGCCTCGTAGGAGTCCTCCCCCGGCATCTGGAGAACCTAAAACTTCATCACAGTCATCCATCTCTTCTATGGGAGGTGGCGGTGGGGGCCAGCTTGGTGCTTTCTGGTCCACTCAGCATGCACAAAAATCACTTGCCACAGAGGGAAAGGGCAAACCCATAGAAGAACCAGCTTGCCATTCTATTTCATCAAAACTTGATAGACTCCGTCCAGCGAATAATCAATTACCTAATAATGTTAGCCCTAGCAAAGTGGGTCAAGATCATAGTAGTGAGAAGCGAATGTCATCAAATGTAGAAAACACAACTACTTTTCAAGGCCAGGCTTTTAACGCTTTTGTTGCTGACTTTGATACAAGTAAGTTCAACTCTGGACCTAGTTATAAGTCTGATAGGGAAGCAGCATTGGAGGCTGAGGTGGAGAAACTCAAGGGGCAGCTGAAGGAAGTCAACTTGGAAAAGGCTGAGATAACTTCCAAGTATGAAAAGCTCACTGGCATCTGTCGATCTCAAAGACAAGATCTCCAAGATCTCAAGCTGGCACTTGCAGCTAAAACTCCATCACCAAAGAAGGAGGCTCATAGAATAGCTTCAACGGTTGCAACATCTACTGCTATGAAATGTGGGACAGTTCGGGAACAAGGGCAAAATAAAGCTGAATGGAAAACTCCTGGTTCAGAACCTAAGTCATCATGGCAAGCTTTTCCAGAGGAACCTCTGCCACGGAGGCCTGTTTCAGTGGACAATACTTCCAAGTCTGTTGGGAGGGGTGGTCAGCAAAACAATCAGCCTGCCCAGCCAGCTACTCAATTTAATTCTTGGGCGTTTGGAACAGAAAACTTTTCTGCTATCCATACTGGAAGCCCACAGATGCCTAGGCATACTACTGATGGGAGTAATTCTGAGGCTAAGTCTACCTATGAGAGAGAATCAGCTTCTCAACCTGCTGGATGGGCTGGTTTTTAA	2082	0.4472	MVLDVGTDRRRLVDVQSSVRCFLLLLAEFWVQDSLGKIVQVEMWRFRPFTHKEPAGLEGRTIDVGNLKINVQKAVAEGGFSCVYLARDAVHMSKRFALKHIICNDEESLGLVKKEISVMKSLKGHPNVVTLYAQAIFDMGRTKEAFLVMEFCEKSLVQVLESRGTGYFEEQQVLLIFRDICNAVFAMHCQSPPIAHRDLKAENLLLASDGLWKLCDFGSVSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLKEAINEKVDLWALGCLLFRICYFRSAFDGESKLQVLNGNYRIPDSPKYSSSIVDLIRDMLQARPDDRPDITQVWFRVNEQLPVNLQRSLPDTPPEFSSSNKQEGASKPANRSTPVPRRSPPPASGEPKTSSQSSISSMGGGGGGQLGAFWSTQHAQKSLATEGKGKPIEEPACHSISSKLDRLRPANNQLPNNVSPSKVGQDHSSEKRMSSNVENTTTFQGQAFNAFVADFDTSKFNSGPSYKSDREAALEAEVEKLKGQLKEVNLEKAEITSKYEKLTGICRSQRQDLQDLKLALAAKTPSPKKEAHRIASTVATSTAMKCGTVREQGQNKAEWKTPGSEPKSSWQAFPEEPLPRRPVSVDNTSKSVGRGGQQNNQPAQPATQFNSWAFGTENFSAIHTGSPQMPRHTTDGSNSEAKSTYERESASQPAGWAGF	693

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3267g00115	693	MobiDBLite	consensus disorder prediction	579	602	-	-
	Pral3267g00115	693	FunFam	probable serine/threonine-protein kinase DDB_G0280111	52	347	-	-
	Pral3267g00115	693	SUPERFAMILY	Protein kinase-like (PK-like)	71	381	IPR011009	-
	Pral3267g00115	693	Gene3D	Transferase(Phosphotransferase) domain 1	53	348	-	-
	Pral3267g00115	693	MobiDBLite	consensus disorder prediction	579	693	-	-
	Pral3267g00115	693	MobiDBLite	consensus disorder prediction	343	406	-	-
	Pral3267g00115	693	PANTHER	SERINE/THREONINE PROTEIN KINASE	43	676	-	-
	Pral3267g00115	693	ProSiteProfiles	Protein kinase domain profile.	69	339	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3267g00115	693	MobiDBLite	consensus disorder prediction	343	371	-	-
	Pral3267g00115	693	CDD	STKc_GAK_like	68	340	-	-
	Pral3267g00115	693	Pfam	Protein kinase domain	72	331	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3267g00115	693	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	194	206	IPR008271	GO:0004672\|GO:0006468
	Pral3267g00115	693	MobiDBLite	consensus disorder prediction	443	471	-	-
	Pral3267g00115	693	Coils	Coil	505	532	-	-
	Pral3267g00115	693	MobiDBLite	consensus disorder prediction	443	458	-	-
	Pral3267g00115	693	SMART	serkin_6	69	333	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3267g00115	693	MobiDBLite	consensus disorder prediction	618	684	-	-
	Pral3267g00115	693	MobiDBLite	consensus disorder prediction	382	398	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3267g00115	Pral-Chr3267	853251	857477	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3267g00115	68	334	Miscellaneous Gene Families	AT2G34180	29.181	2.40e-20	93.2

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NAK	Pral3267g00115		Pkinase	5.2e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3267g00115	K08853		-	gmx:100808507	867.84