LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3267g00114	ATGTGGAGATTTAGGCCATTCACACATAAAGAGCCGGCTGGGCTTGAAGGACGCACTATAGATGTTGGCAATCTTAAAATAAATGTTCAAAAGGCCGTCGCTGAAGGGGGGTTCTCTTGTGTCTACTTGGCTCGTGATGCTGTGCACATGTCAAAACGGTTTGCTTTGAAGCACATTATATGCAACGATGAAGAATCCCTTGGACTGGTCAAGAAGGAGATCTCAGTGATGAAGTCATTGAAAGGGCATCCTAATGTTGTCACACTTTATGCACAAGCAATTTTTGACATGGGTAGGACAAAAGAAGCATTCCTTGTGATGGAATTCTGTGAGAAGTCTCTGGTGCAGGTGCTGGAGAGCCGGGGAACAGGGTATTTTGAGGAGCAACAGGTTTTATTGATCTTCAGGGATATATGCAATGCAGTTTTTGCAATGCATTGCCAATCGCCACCTATTGCTCACCGAGACTTGAAAGCCGAAAATCTTCTATTAGCTTCGGATGGCTTGTGGAAATTGTGTGACTTTGGAAGCGTATCCACCAATCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGATAATATCAGAAAGTACACAACTCCTGCCTATAGGGCTCCTGAGATGTGGGATCTGTTTCTGAAAGAAGCCATCAATGAAAAAGTGGACTTATGGGCTCTTGGGTGTCTTCTCTTTCGCATATGCTACTTCAGGAGTGCATTTGATGGAGAATCCAAGCTTCAAGTCCTTAATGGAAACTATCGCATCCCTGATTCACCTAAATACAGTTCATCCATTGTAGACTTAATCAGAGACATGCTTCAAGCTCGACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTCGGGTTAATGAGCAGTTACCTGTTAATTTGCAAAGGTCATTACCTGATACACCACCTGAATTTTCTTCTTCCAACAAGCAGGAAGGTGCTTCAAAGCCTGCTAACAGATCCACCCCAGTGCCTCGTAGGAGTCCTCCCCCGGCATCTGGAGAACCTAAAACTTCATCACAGTCATCCATCTCTTCTATGGGAGGTGGCGGTGGGGGCCAGCTTGGTGCTTTCTGGTCCACTCAGCATGCACAAAAATCACTTGCCACAGAGGGAAAGGGCAAACCCATAGAAGAACCAGCTTGCCATTCTATTTCATCAAAACTTGATAGACTCCGTCCAGCGAATAATCAATTACCTAATAATGTTAGCCCTAGCAAAGTGGTCAGTGCCCAATCCCAAACTTTGAAAAGCAGTTCACATGGAAAATCAAACAAGCCTGATCCTGGTTCTTCTAAGGACTTTGAAATAAAATTTTTTCAGGGTCAAGATCATAGTAGTGAGAAGCGAATGTCATCAAATGTAGAAAACACAACTACTTTTCAAGGCCAGGCTTTTAACGCTTTTGTTGCTGACTTTGATACAAGTAAGTTCAACTCTGGACCTAGTTATAAGTCTGATAGGGAAGCAGCATTGGAGGCTGAGGTGGAGAAACTCAAGGGGCAGCTGAAGGAAGTCAACTTGGAAAAGGCTGAGATAACTTCCAAGTATGAAAAGCTCACTGGCATCTGTCGATCTCAAAGACAAGATCTCCAAGATCTCAAGCTGGCACTTGCAGCTAAAACTCCATCACCAAAGAAGGAGGCTCATAGAATAGCTTCAACGGTTGCAACATCTACTGCTATGAAATGTGGGACAGTTCGGGAACAAGGGCAAAATAAAGCTGAATGGAAAACTCCTGGTTCAGAACCTAAGTCATCATGGCAAGCTTTTCCAGAGGAACCTCTGCCACGGAGGCCTGTTTCAGTGGACAATACTTCCAAGTCTGTTGGGAGGGGTGGTCAGCAAAACAATCAGCCTGCCCAGCCAGCTACTCAATTTAATTCTTGGGCGTTTGGAACAGAAAACTTTTCTGCTATCCATACTGGAAGCCCACAGATGCCTAGGCATACTACTGATGGGAGTAATTCTGAGGCTAAGTCTACCTATGAGAGAGAATCAGCTTCTCAACCTGCTGGATGGGCTGGTTTTTAA	2055	0.4457	MWRFRPFTHKEPAGLEGRTIDVGNLKINVQKAVAEGGFSCVYLARDAVHMSKRFALKHIICNDEESLGLVKKEISVMKSLKGHPNVVTLYAQAIFDMGRTKEAFLVMEFCEKSLVQVLESRGTGYFEEQQVLLIFRDICNAVFAMHCQSPPIAHRDLKAENLLLASDGLWKLCDFGSVSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLKEAINEKVDLWALGCLLFRICYFRSAFDGESKLQVLNGNYRIPDSPKYSSSIVDLIRDMLQARPDDRPDITQVWFRVNEQLPVNLQRSLPDTPPEFSSSNKQEGASKPANRSTPVPRRSPPPASGEPKTSSQSSISSMGGGGGGQLGAFWSTQHAQKSLATEGKGKPIEEPACHSISSKLDRLRPANNQLPNNVSPSKVVSAQSQTLKSSSHGKSNKPDPGSSKDFEIKFFQGQDHSSEKRMSSNVENTTTFQGQAFNAFVADFDTSKFNSGPSYKSDREAALEAEVEKLKGQLKEVNLEKAEITSKYEKLTGICRSQRQDLQDLKLALAAKTPSPKKEAHRIASTVATSTAMKCGTVREQGQNKAEWKTPGSEPKSSWQAFPEEPLPRRPVSVDNTSKSVGRGGQQNNQPAQPATQFNSWAFGTENFSAIHTGSPQMPRHTTDGSNSEAKSTYERESASQPAGWAGF	684

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3267g00114	684	SUPERFAMILY	Protein kinase-like (PK-like)	29	339	IPR011009	-
	Pral3267g00114	684	MobiDBLite	consensus disorder prediction	401	433	-	-
	Pral3267g00114	684	FunFam	probable serine/threonine-protein kinase DDB_G0280111	10	305	-	-
	Pral3267g00114	684	Pfam	Protein kinase domain	30	289	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3267g00114	684	SMART	serkin_6	27	291	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3267g00114	684	MobiDBLite	consensus disorder prediction	434	458	-	-
	Pral3267g00114	684	MobiDBLite	consensus disorder prediction	301	364	-	-
	Pral3267g00114	684	Coils	Coil	496	523	-	-
	Pral3267g00114	684	MobiDBLite	consensus disorder prediction	560	593	-	-
	Pral3267g00114	684	MobiDBLite	consensus disorder prediction	301	329	-	-
	Pral3267g00114	684	ProSiteProfiles	Protein kinase domain profile.	27	297	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3267g00114	684	MobiDBLite	consensus disorder prediction	609	675	-	-
	Pral3267g00114	684	CDD	STKc_GAK_like	26	298	-	-
	Pral3267g00114	684	MobiDBLite	consensus disorder prediction	340	356	-	-
	Pral3267g00114	684	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	152	164	IPR008271	GO:0004672\|GO:0006468
	Pral3267g00114	684	Gene3D	Transferase(Phosphotransferase) domain 1	11	306	-	-
	Pral3267g00114	684	MobiDBLite	consensus disorder prediction	548	684	-	-
	Pral3267g00114	684	MobiDBLite	consensus disorder prediction	401	460	-	-
	Pral3267g00114	684	PANTHER	SERINE/THREONINE PROTEIN KINASE	1	667	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3267g00114	Pral-Chr3267	853251	857907	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3267g00114	26	292	Miscellaneous Gene Families	AT2G34180	29.181	2.58e-20	93.2

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NAK	Pral3267g00114		Pkinase	5.1e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3267g00114	K08853		-	gmx:100808507	914.45