Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3267g00106 ATGGAGCTTGGTTTGAGCTTGGGAGATCATGCTTCAAAGCCTTCTGAAACTTCCAGCCTTCTGGGATTAGGCTTCACCACTTTGTCCATTGGTTCTTTCTGTACCAAAGCATCAAATCAACAACAAGAAGAAGAACCAGAAGAAAAAGAAGCAAAAAAGCAAAAGGGAAACCAGAGCATAGAAGACCATGAAGATAGACCTGAATATGTTCAGCTTGATCTTCTCCCTCACACCCCAGTCGCTGTTTCTCGTACTAACCCACCTTCCCAAATCTCATTTCCATGGCCTCCTTCTGAAAATGGCAGTTTTTCTAGGGGCATGGATATGAATAGATTGCCGCCGCCGGCGGCTGCGGAGGAGGATGAGGCGGCGATGTCGTCGTCTCCGAACAGCGCTGCATCGTCGTTTCAGATGGATCTCAGTGTGTTTAACAGAGGAGGGAGTAGTCTTAGTGGCTGTAAGAGAGATTATGACGGAGAGTTATATTATGATCAAAGGGCTGGTTCTTCAAGAGCAAGCGACGAAGATGACAACGTTGGTAGTACGAGGAAGAAGCTAAGGCTGTCCAAGGAACAATCTGCTTTTCTCGAGGAGAGCTTCAAAGAACACAGCACCCTCAACCCAAAACAAAAACTTGCTCTTGCCAAACAGCTCAATCTTCGCCCTCGCCAAGTAGAAGTCTGGTTCCAAAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAGGTAGATTGTGAGTACTTGAAGAGGTGTTGTGAGACATTAACTGAAGAGAACAGAAGGCTTCACAAAGAGCTTCAAGAACTGCGAGCTTTGAAGACTAATTCAAACCCATTCTTCATGCAATTACCGGCCACTACTTTGACCATGTGTCCCTCTTGTGAGCGAGTCGCCACTAACAATTCCTCCACCATCACTACCACCGTCGCCGCCGCCGTCACCACGGTTGCTACTTCCTCTGCAAGTCCTTCTGGGAACAAAGTCACTGAAACAAGAGCCGCCATCGAACCTGCCTCATCCAAAGCCACCGGATTCCCTCTGAGCAAGCCAAAGTTCTATCCTTTTGCTCACACCAAAACCCACCATCGCCATCCCCACCCATCCACACCCTCTTGA 1116 0.4812 MELGLSLGDHASKPSETSSLLGLGFTTLSIGSFCTKASNQQQEEEPEEKEAKKQKGNQSIEDHEDRPEYVQLDLLPHTPVAVSRTNPPSQISFPWPPSENGSFSRGMDMNRLPPPAAAEEDEAAMSSSPNSAASSFQMDLSVFNRGGSSLSGCKRDYDGELYYDQRAGSSRASDEDDNVGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTNSNPFFMQLPATTLTMCPSCERVATNNSSTITTTVAAAVTTVATSSASPSGNKVTETRAAIEPASSKATGFPLSKPKFYPFAHTKTHHRHPHPSTPS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3267g00106 371 MobiDBLite consensus disorder prediction 320 347 - -
Pral3267g00106 371 ProSitePatterns 'Homeobox' domain signature. 214 237 IPR017970 GO:0000981|GO:0006355
Pral3267g00106 371 Pfam Homeodomain 183 237 IPR001356 GO:0003677
Pral3267g00106 371 MobiDBLite consensus disorder prediction 355 371 - -
Pral3267g00106 371 Coils Coil 252 275 - -
Pral3267g00106 371 MobiDBLite consensus disorder prediction 352 371 - -
Pral3267g00106 371 SUPERFAMILY Homeodomain-like 169 240 IPR009057 -
Pral3267g00106 371 MobiDBLite consensus disorder prediction 36 132 - -
Pral3267g00106 371 SMART HOX_1 181 243 IPR001356 GO:0003677
Pral3267g00106 371 MobiDBLite consensus disorder prediction 169 186 - -
Pral3267g00106 371 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 46 319 - -
Pral3267g00106 371 MobiDBLite consensus disorder prediction 82 105 - -
Pral3267g00106 371 FunFam Homeobox-leucine zipper protein 18 169 244 - -
Pral3267g00106 371 Gene3D - 187 237 - -
Pral3267g00106 371 Pfam HD-ZIP protein N terminus 97 136 IPR006712 GO:0005634
Pral3267g00106 371 MobiDBLite consensus disorder prediction 41 71 - -
Pral3267g00106 371 Pfam Homeobox associated leucine zipper 239 273 IPR003106 GO:0006355|GO:0043565
Pral3267g00106 371 CDD bZIP 232 271 - -
Pral3267g00106 371 MobiDBLite consensus disorder prediction 167 186 - -
Pral3267g00106 371 ProSiteProfiles 'Homeobox' domain profile. 179 239 IPR001356 GO:0003677
Pral3267g00106 371 CDD homeodomain 183 240 IPR001356 GO:0003677
Pral3267g00106 371 SMART halz 239 283 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3267g00106 Pral-Chr3267 805229 807062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3267g00106 83 296 Homeobox Transcription Factor Family AT3G60390 52.263 1.72e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pral3267g00106 Homeodomain 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3267g00106 K09338 - qsa:O6P43_029477 362.073