Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3267g00098 ATGTCCTCCGCCACCGCCACCGCCACCGCTGCCGACACTACCGTCGTGCCACAGACGGTGGAAGCAGAAATGAAGACGTACTGGTGTCACGAATGCGACATGAGTGTTGCTCTGTCTCCCCCTTCTTCGTCGTCGACTCTACTCTGCCCCCATTGTCACACCCACTTTCTCGAACTCATGGACTCCCCTTTCTTCCCTCAATCAGATTCTCATTCATTTCCCGCTTCGCTTTCCCTCTTCGACACCCCCTACCTTCAACACCTAATCCAGAACCACCTCCTTCCCTCGGACGACGACGACGACGACGGTGAACTTGAGTATGACGACGTTTTCGAGGACCCGTTATCTCTTCTCTCCACAATACCAAATACCACCTCCAAATCTTGCTCTGATTCTGTACCCACTATAACAGTTACCTCTTCATTGCTATCGCAGCTTGACCCTGGAGGGGTTCTTTGTGCGGTTTGTAAGGACCCAATTGGGGTTGATGCGCAGGCTAAGCAGCTTCCGTGTAAGCATTTGTACCACTCCGATTGCATTACGCCGTGGCTGGAGCACCACAATTCGTGCCCACTTTGTCGCTTTCAGCTCGTCGGCGAGCAAGAGGAGGAGGGGGCTTCTCAGGCGAGGAGGATCAGAAGGCAGTTGAGAACAGCCATGACGAGGCTGTCTGAATTGATGGAAGAGGAGGATGATTTCTACGGGTTGAGGACCACTCTGAGTCACATTGCTAGTAGACACCGTGTTCTTTCTTCTGCTATTTCGGGTCATAGGAATGATGAGAACCCTTCTGATTCCCTGTCTTCCCCTCGGATGACGGAAGCAGATTCTGTGTCTGCCGGCGGAAATGGTAATTCGGAGTCTGTTTCGAGCTGA 876 0.5263 MSSATATATAADTTVVPQTVEAEMKTYWCHECDMSVALSPPSSSSTLLCPHCHTHFLELMDSPFFPQSDSHSFPASLSLFDTPYLQHLIQNHLLPSDDDDDDGELEYDDVFEDPLSLLSTIPNTTSKSCSDSVPTITVTSSLLSQLDPGGVLCAVCKDPIGVDAQAKQLPCKHLYHSDCITPWLEHHNSCPLCRFQLVGEQEEEGASQARRIRRQLRTAMTRLSELMEEEDDFYGLRTTLSHIASRHRVLSSAISGHRNDENPSDSLSSPRMTEADSVSAGGNGNSESVSS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3267g00098 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 211 IPR013083 -
Pral3267g00098 291 ProSiteProfiles Zinc finger RING-type profile. 153 194 IPR001841 -
Pral3267g00098 291 SMART ring_2 153 193 IPR001841 -
Pral3267g00098 291 SUPERFAMILY RING/U-box 146 198 - -
Pral3267g00098 291 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 87 197 - -
Pral3267g00098 291 MobiDBLite consensus disorder prediction 252 291 - -
Pral3267g00098 291 Pfam Ring finger domain 153 194 IPR001841 -
Pral3267g00098 291 Pfam zinc-ribbon 26 60 IPR039525 GO:0061630
Pral3267g00098 291 MobiDBLite consensus disorder prediction 255 291 - -
Pral3267g00098 291 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3267g00098 Pral-Chr3267 747153 750778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3267g00098 21 236 C3H Transcription Factor Family AT3G60080 34.510 1.17e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3267g00098 K11982 - pcin:129316714 370.548