Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3267g00087 ATGGAAGCAGCCAAAGTTCCTGGAGGAGAGATTCGGAGACTTCATATCATCTACTTTCTCAGTCGATCAGGCTGTCGTATTGAGCATCCTCATCTCATTCGTGTTCACCATCTTGCTCGAAATGGAGTCTATCTCCGAGATATTAAGAGGTGGCTTGGTGAATTGAGAGGAAAGGAATTGCCAGAAGCTTTTGCTTGGTCATATAAGAGGAGGTACAAGGCTGGTTATGTCTGGCAAGATTTGTTAGATGACGACCTCATCACCCCCATCTCTGACAATGAATACGTCCTCAAAGGATCACAAATCAGCCCCACCCTACTGGAAACTGGTTCACTTGGTGCTGTTGATAAGAAAGCTTCCATTCCAAGGCAGCAACAATGTTTGAAAGAAGAACCGAAGATTCAAACATACCCACAATCTGCAACAGATACTCCCAGCAAAGTATCATCAGAAATCAGCCAGGAATCAGACAGGTCAACCTTAACTGATGAATATGATTGTTCGAAGTTTGAACAGAACCCTGATGAACAAAGCTCTGAGAGGCTGACTGAGAATTACACTTTGCCTCCTTTGTATCAACATCTATTGAACAGGAAAAGTAGGAAACAGAGGACAGAAGATGAGATAGTGAACAATAACAAAACCGATGCGCCTGATGATTCATCCTTCTCTACGTCATCGTCGTCATCATCTTCTTCAAAATTCTCCTTTGACAAGTGCAGAAGCAATTCAACTAGGGGTTCTTTTGTGTTTCGCAACTTGATCACTTGTGGGAATGCGGATGTCAGCGATGCAGTTCTAGTCATGTTGAACAAAAAGGGATCAAACAAGCCTAATAATGGTGAACTTAGTTCTGAGATTTGTAAACGGGATAAATTGGGAGGATCAGCTACGGGCTTTGCAAATTCCTGGAGTCATCAGAAACATCAGCAATATGGAGCCAGCAGAAGAAGCTATGATGGAGGCGAAACAAACAAGAACAAGAAGAAGCCGGGCGAGTTCATGACTCAAAATCATCCAAAACCATTTGGTGGACCAACATGCTCGCAATGCGGGAAGAAGTTCAGGCCAGAGAAAATGCACAAGCACATGAAGTCATGCAGAGGAATGAAATCCTTGTCAAAATCTGCTGAGAAGACAGCACCTCCCAGATCATCAACTTCCTCCAACACAGATTCCACAAGCTTCCTGCCTATTAAAATATGA 1206 0.4328 MEAAKVPGGEIRRLHIIYFLSRSGCRIEHPHLIRVHHLARNGVYLRDIKRWLGELRGKELPEAFAWSYKRRYKAGYVWQDLLDDDLITPISDNEYVLKGSQISPTLLETGSLGAVDKKASIPRQQQCLKEEPKIQTYPQSATDTPSKVSSEISQESDRSTLTDEYDCSKFEQNPDEQSSERLTENYTLPPLYQHLLNRKSRKQRTEDEIVNNNKTDAPDDSSFSTSSSSSSSSKFSFDKCRSNSTRGSFVFRNLITCGNADVSDAVLVMLNKKGSNKPNNGELSSEICKRDKLGGSATGFANSWSHQKHQQYGASRRSYDGGETNKNKKKPGEFMTQNHPKPFGGPTCSQCGKKFRPEKMHKHMKSCRGMKSLSKSAEKTAPPRSSTSSNTDSTSFLPIKI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3267g00087 401 MobiDBLite consensus disorder prediction 321 335 - -
Pral3267g00087 401 MobiDBLite consensus disorder prediction 132 242 - -
Pral3267g00087 401 Pfam Protein SOSEKI, plant 15 234 IPR010369 -
Pral3267g00087 401 MobiDBLite consensus disorder prediction 215 242 - -
Pral3267g00087 401 MobiDBLite consensus disorder prediction 299 320 - -
Pral3267g00087 401 MobiDBLite consensus disorder prediction 378 401 - -
Pral3267g00087 401 MobiDBLite consensus disorder prediction 299 401 - -
Pral3267g00087 401 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 9 389 IPR010369 -
Pral3267g00087 401 MobiDBLite consensus disorder prediction 132 156 - -
Pral3267g00087 401 MobiDBLite consensus disorder prediction 157 178 - -
Pral3267g00087 401 MobiDBLite consensus disorder prediction 199 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3267g00087 Pral-Chr3267 694660 698365 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral3267g00087 DUF966 3.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3267g00087 - - aprc:113855595 392.889