Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3267g00073 ATGATGCAAGGAAGTGGACAAATAGCAGTGCCTCCAGGGTTCAGGTTCCACCCAACAGATGAGGAGCTTCTTTACTATTATCTGAGGAAGAAAGTTTCTTTTGAAGCCATTGACCTTGATGTCATCCGAGAAGTTGATCTCAACAAACTTGAGCCTTGGGATCTCAAAGAAAAATGTAGGATTGGATCAGGACCTCAGAACGAATGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCGACCGGAACACGAACGAACCGGGCGACAACGGCCGGATTTTGGAAGGCAACGGGGAGGGACAAGGCCATATACCTGAGCAATTCCAGGAGGATAGGGATGAGGAAAACGCTAGTGTTCTACACTGGCCGTGCTCCTCACGGCCAAAAGACTGAGTGGATTATGCATGAGTACCGTCTTGACCAAGACGATGCTGAGCTTCAGGAAGATGGGTGGGTGGTGTGCAGGGTTTTTAAGAAGAAGAACTTTAACAGAGGATTTCATCCAGAAATGGATCAAGAAGATGAGCAGATAATGGGCCACATGGCATCAACAAGCACTGCTTCTAATAATAATTGCATGAAGGTACTTGAACCATTAAAACACCACCACCACCTTCATCATCATCAAGGACTTGTTCATCAACCTTATTATGATGACCACCATAGTAATAATAATAATAGTTTTAATTACAATAGCTGCTTTAATGCCTCAATGCACCTACCACAGTTATTCAGCCCAGAATCTGCAGTACCACCCCTTCCTTCCGCAACCTCTTCGCCCTCCTCCACGTCGACTATGAACCCCATGGACGTCCTTCACTGTTCTCACAACTTACTTAGGCTCGCTTCAACTTCTTCTCCTCCTCCTGGGGGACTCGTTAGTAATCTCATGCAGCAACAAGGTGATCACAGACTCAATAATGGAGACTGGTCGTTCTTGGACAAGCTATTAATTTCACAACAACAGCAACAACAAACTATGGTTACTCCTTTGGGGGCTCCTTCTTCTTCCCACAAGTTCCCTTTTCATTACCTTGCTTGCGATCAGAGCCAAATCATGAAGTAA 1065 0.4545 MMQGSGQIAVPPGFRFHPTDEELLYYYLRKKVSFEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSNSRRIGMRKTLVFYTGRAPHGQKTEWIMHEYRLDQDDAELQEDGWVVCRVFKKKNFNRGFHPEMDQEDEQIMGHMASTSTASNNNCMKVLEPLKHHHHLHHHQGLVHQPYYDDHHSNNNNSFNYNSCFNASMHLPQLFSPESAVPPLPSATSSPSSTSTMNPMDVLHCSHNLLRLASTSSPPPGGLVSNLMQQQGDHRLNNGDWSFLDKLLISQQQQQQTMVTPLGAPSSSHKFPFHYLACDQSQIMK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3267g00073 354 Gene3D NAC domain 19 163 IPR036093 GO:0003677|GO:0006355
Pral3267g00073 354 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Pral3267g00073 354 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Pral3267g00073 354 FunFam NAC domain-containing protein 19 163 - -
Pral3267g00073 354 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Pral3267g00073 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3267g00073 Pral-Chr3267 614174 616424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3267g00073 2 319 NAC Transcription Factor Family AT1G79580 59.021 8.05e-119 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3267g00073 NAM 6.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3267g00073 - - pcin:129316064 550.821