Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3267g00068 ATGGCAGCCAGTACTACTACGACCGCGGCGCCCCCGCGCCAGCTATCGCAGAAGGAGGCTGACATCCAGATGATGTTAGCCGCGGAGGTCCACCTTGGGACCAAAAATTGTAACTTTCAAATGGAGCGATACGTCTTCAAGCGACGCAATGATGGCATTTACATTATCAACCTTGGGAAGACTTGGGAAAAGCTTCAGCTTGCTGCTAGGGTTATTGTTGCCATAGAGAACCCTCAGGATATTATAGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCAGTTCTTAAGTTTGCTCAATACACAGGAGCTCATGCACTTGCTGGGAGGCACACTCCCGGAACGTTCACAAACCAGCTCCAGACATCCTACAGTGAGCCTCGCCTTCTCATTTTGACTGATCCAAGAACAGATCATCAGCCCATTAAGGAGGCTGCCCTTGGAAATATACCGACTATTGCATTCTGTGACACTGATTCTCCAATGAGATATGTTGACATTGGTATTCCTGCCAACAACAAGGGAAAGCACAGCATAGGTTGTCTCTTTTGGCTGTTGGCAAGAATGGTTCTGCAGATGAGGGGCACTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTGGATTTATTCTTCTACAGAGAACCTGAGGAGACCAAGCAACAAGAGGAAAATGAAGTGCCTGTTACTCAGGACTATGCTCTTACAGACTTCAGTGCTGCTGGTGTTGCTACTGATGACCAGTGGCCTGCTGCTGCCGATCAGCCCTGGCCGACTGAGACAACTCCACAGCCTATTTCTGCAGCTCCTGCTGCCAATTGGGCTGCAGATGCTGCTGGAGAATGGGTATCCGCACCACCTCCCCAAGCTCCTGTCCAACAAATTCCTACCCCCGGAATTGAGAATGTGGCTGCCACCGGCTGGAATTAA 924 0.5022 MAASTTTTAAPPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHALAGRHTPGTFTNQLQTSYSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEETKQQEENEVPVTQDYALTDFSAAGVATDDQWPAAADQPWPTETTPQPISAAPAANWAADAAGEWVSAPPPQAPVQQIPTPGIENVAATGWN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3267g00068 307 Gene3D - 21 226 - -
Pral3267g00068 307 MobiDBLite consensus disorder prediction 248 296 - -
Pral3267g00068 307 FunFam 40S ribosomal protein SA 21 227 - -
Pral3267g00068 307 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 SUPERFAMILY Ribosomal protein S2 17 207 IPR023591 -
Pral3267g00068 307 Pfam Ribosomal protein S2 123 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 Pfam Ribosomal protein S2 25 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 PANTHER 40S RIBOSOMAL PROTEIN SA 12 288 IPR005707 GO:0003735|GO:0006412|GO:0015935
Pral3267g00068 307 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 NCBIfam 30S ribosomal protein S2 17 213 IPR005707 GO:0003735|GO:0006412|GO:0015935
Pral3267g00068 307 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Pral3267g00068 307 Hamap 40S ribosomal protein SA [rps-0]. 9 275 IPR027498 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3267g00068 Pral-Chr3267 565633 568580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3267g00068 1 284 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 74.825 1.24e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3267g00068 K02998 - gmx:100805318 492.271